Variant report

Variant nsv1009728
Chromosome Location chr1:146821504-146927966
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:146821600-146823400 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr1:146822200-146823600 Enhancers Brain Germinal Matrix brain
3 chr1:146822400-146824000 Enhancers Cortex derived primary cultured neurospheres brain
4 chr1:146822400-146824000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
5 chr1:146822800-146823400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:146822800-146823400 Enhancers Fetal Brain Female brain
7 chr1:146829400-146830200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:146848400-146848800 Enhancers K562 blood
9 chr1:146848800-146850800 Flanking Active TSS K562 blood
10 chr1:146849000-146850200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:146849200-146849600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:146849600-146850000 Enhancers iPS-20b Cell Line embryonic stem cell
13 chr1:146850800-146852200 Enhancers K562 blood
14 chr1:146860000-146860800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:146860400-146860800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:146860400-146861800 Enhancers K562 blood
17 chr1:146860600-146861000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:146860600-146861200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:146860600-146861400 Enhancers Placenta Amnion Placenta Amnion
20 chr1:146860800-146862000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr1:146861000-146861200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr1:146861200-146861400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr1:146861400-146861600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
24 chr1:146861400-146861800 Enhancers iPS-20b Cell Line embryonic stem cell
25 chr1:146861400-146861800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
26 chr1:146861600-146861800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:146861600-146862200 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr1:146861600-146862200 Enhancers HUES6 Cell Line embryonic stem cell
29 chr1:146861600-146862200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr1:146861800-146874400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr1:146862000-146862400 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr1:146873800-146874000 Enhancers HepG2 liver
33 chr1:146873800-146874200 Enhancers Liver Liver
34 chr1:146874000-146874600 Active TSS HepG2 liver
35 chr1:146874200-146874600 Active TSS Rectal Smooth Muscle rectum
36 chr1:146874200-146874800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
37 chr1:146874200-146875000 Active TSS Colonic Mucosa Colon
38 chr1:146874400-146874800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
39 chr1:146874400-146875000 Active TSS Rectal Mucosa Donor 29 rectum
40 chr1:146885600-146887400 Enhancers Liver Liver
41 chr1:146888000-146889600 Enhancers Rectal Mucosa Donor 31 rectum
42 chr1:146889600-146890600 Enhancers Fetal Intestine Small intestine
43 chr1:146894000-146894600 Enhancers K562 blood
44 chr1:146894600-146894800 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr1:146894600-146894800 Active TSS K562 blood
46 chr1:146894800-146895000 Flanking Active TSS K562 blood
47 chr1:146894800-146895400 Active TSS ES-I3 Cell Line embryonic stem cell
48 chr1:146895000-146895400 Active TSS HUES6 Cell Line embryonic stem cell
49 chr1:146895000-146895400 Active TSS Rectal Mucosa Donor 31 rectum
50 chr1:146910000-146910600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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