Variant report

Variant nsv1009736
Chromosome Location chr2:50878157-50948407
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:241 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:50876000-50878800 Weak transcription Brain Hippocampus Middle brain
2 chr2:50876000-50878800 Weak transcription Brain Substantia Nigra brain
3 chr2:50876000-50878800 Weak transcription Fetal Brain Female brain
4 chr2:50876200-50879200 Weak transcription Brain Cingulate Gyrus brain
5 chr2:50876400-50878200 Enhancers HUES64 Cell Line embryonic stem cell
6 chr2:50876400-50879800 Enhancers HMEC breast
7 chr2:50877000-50879200 Enhancers Brain Germinal Matrix brain
8 chr2:50877400-50879000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr2:50877600-50879000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:50877800-50878200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr2:50877800-50878800 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr2:50878000-50879000 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr2:50878000-50879400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr2:50878000-50879800 Enhancers NHEK skin
15 chr2:50878200-50878800 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr2:50878200-50880000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:50878600-50879200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
18 chr2:50878800-50879000 Enhancers HUES64 Cell Line embryonic stem cell
19 chr2:50878800-50879000 Enhancers Brain Substantia Nigra brain
20 chr2:50878800-50879400 Enhancers Brain Hippocampus Middle brain
21 chr2:50878800-50879400 Enhancers Fetal Brain Female brain
22 chr2:50878800-50879800 Enhancers Cortex derived primary cultured neurospheres brain
23 chr2:50879000-50879200 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr2:50879000-50879400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr2:50879000-50879400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:50879000-50879400 Weak transcription Brain Substantia Nigra brain
27 chr2:50879000-50879800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr2:50879200-50879400 Enhancers HSMMtube muscle
29 chr2:50879400-50879600 Enhancers Brain Cingulate Gyrus brain
30 chr2:50879400-50879800 Enhancers Brain Substantia Nigra brain
31 chr2:50879400-50885000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:50879800-50884400 Weak transcription NHEK skin
33 chr2:50879800-50888600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr2:50880000-50884600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr2:50884400-50886800 Enhancers NHEK skin
36 chr2:50884600-50885000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr2:50884600-50886400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr2:50884800-50885200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr2:50885000-50886400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:50885000-50888600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:50885200-50888400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr2:50885400-50886400 Enhancers HMEC breast
43 chr2:50885600-50886400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr2:50885800-50886400 Enhancers H9 Cell Line embryonic stem cell
45 chr2:50885800-50886400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
46 chr2:50886000-50886200 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr2:50886000-50886400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
48 chr2:50886200-50888600 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr2:50886400-50890400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr2:50886800-50890600 Weak transcription NHEK skin

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