Variant report

Variant nsv1009859
Chromosome Location chr1:62435767-62447302
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62385000-62494200 Weak transcription Aorta Aorta
2 chr1:62409000-62436800 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr1:62409200-62456000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:62409200-62456800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:62409200-62457000 Weak transcription Fetal Intestine Large intestine
6 chr1:62409200-62518600 Weak transcription Pancreas Pancrea
7 chr1:62409400-62458400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:62418200-62446400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:62418400-62441400 Weak transcription Fetal Kidney kidney
10 chr1:62419600-62445800 Weak transcription Left Ventricle heart
11 chr1:62424200-62436600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr1:62424200-62494200 Weak transcription Esophagus oesophagus
13 chr1:62424800-62438200 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:62425000-62441400 Weak transcription Stomach Mucosa stomach
15 chr1:62430600-62442200 Weak transcription Fetal Intestine Small intestine
16 chr1:62432200-62439000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:62433400-62439200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:62433600-62456800 Weak transcription NHEK skin
19 chr1:62433800-62438600 Weak transcription HMEC breast
20 chr1:62433800-62444800 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr1:62433800-62445400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:62434000-62457000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:62434800-62444800 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr1:62435400-62435800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:62435800-62436000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:62436000-62436400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:62438200-62438600 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr1:62438400-62439000 Enhancers Liver Liver
29 chr1:62438400-62439200 Enhancers Skeletal Muscle Male skeletal muscle
30 chr1:62438600-62439600 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:62438600-62439600 Enhancers Placenta Amnion Placenta Amnion
32 chr1:62438600-62445000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr1:62438800-62439000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr1:62439000-62439200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:62439000-62439400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:62439000-62439800 Enhancers Psoas Muscle Psoas
37 chr1:62439000-62439800 Active TSS Skeletal Muscle Female skeletal muscle
38 chr1:62439000-62440000 Flanking Active TSS Liver Liver
39 chr1:62439000-62440000 Enhancers Pancreatic Islets Pancreatic Islet
40 chr1:62439200-62439600 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr1:62439200-62440200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:62439200-62441200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr1:62439400-62441200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr1:62439600-62439800 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr1:62439600-62439800 Enhancers Skeletal Muscle Male skeletal muscle
46 chr1:62439800-62440000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
47 chr1:62439800-62440400 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr1:62439800-62440800 Weak transcription Psoas Muscle Psoas
49 chr1:62439800-62440800 Enhancers HepG2 liver
50 chr1:62439800-62441000 Weak transcription Skeletal Muscle Male skeletal muscle

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