Variant report

Variant nsv1010070
Chromosome Location chr1:194364517-194650839
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:166 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:194363200-194365000 Enhancers Cortex derived primary cultured neurospheres brain
2 chr1:194363200-194365000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:194363200-194365800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:194363400-194364800 Enhancers Brain Anterior Caudate brain
5 chr1:194363400-194365200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:194363800-194365600 Enhancers Brain Substantia Nigra brain
7 chr1:194364200-194365200 Enhancers Brain Hippocampus Middle brain
8 chr1:194365000-194369400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr1:194365000-194370400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:194365200-194370400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:194365600-194370200 Weak transcription Brain Substantia Nigra brain
12 chr1:194365800-194366200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:194366200-194366400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:194366400-194369600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:194369400-194369600 Enhancers Cortex derived primary cultured neurospheres brain
16 chr1:194369600-194369800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:194369600-194370000 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:194369800-194370200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:194370000-194370400 Enhancers Cortex derived primary cultured neurospheres brain
20 chr1:194370200-194370600 Active TSS Brain Substantia Nigra brain
21 chr1:194370200-194370800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:194370400-194370800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:194370400-194370800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:194370400-194370800 Enhancers Brain Inferior Temporal Lobe brain
25 chr1:194370600-194370800 Enhancers Brain Substantia Nigra brain
26 chr1:194370800-194371200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:194371200-194372200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:194372200-194372400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:194376400-194376600 Enhancers Fetal Lung lung
30 chr1:194376600-194380200 Weak transcription Fetal Lung lung
31 chr1:194380200-194380600 Enhancers Fetal Lung lung
32 chr1:194380600-194383200 Weak transcription Fetal Lung lung
33 chr1:194383200-194383400 ZNF genes & repeats Fetal Lung lung
34 chr1:194388800-194389200 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
35 chr1:194389200-194389600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:194389600-194390000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr1:194390000-194400600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr1:194400400-194400600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:194406600-194406800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:194411000-194413800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:194411400-194411800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:194411400-194412000 Enhancers Brain Substantia Nigra brain
43 chr1:194411400-194412200 Enhancers Cortex derived primary cultured neurospheres brain
44 chr1:194411400-194413400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:194411600-194412000 Enhancers Brain Angular Gyrus brain
46 chr1:194411600-194412000 Enhancers Brain Anterior Caudate brain
47 chr1:194411600-194412000 Enhancers Brain Hippocampus Middle brain
48 chr1:194411600-194412000 Enhancers Brain Inferior Temporal Lobe brain
49 chr1:194411600-194412400 Enhancers Brain Germinal Matrix brain
50 chr1:194411600-194412400 Enhancers Fetal Brain Female brain

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