Variant report

Variant nsv1010116
Chromosome Location chr2:78399683-78660165
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:272 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:78402600-78403400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
2 chr2:78402800-78403200 Enhancers HUES64 Cell Line embryonic stem cell
3 chr2:78402800-78403200 Enhancers iPS-15b Cell Line embryonic stem cell
4 chr2:78403200-78408200 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr2:78405000-78405200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr2:78408000-78408600 Enhancers iPS-18 Cell Line embryonic stem cell
7 chr2:78408000-78408600 Enhancers iPS-20b Cell Line embryonic stem cell
8 chr2:78408200-78408600 Enhancers ES-I3 Cell Line embryonic stem cell
9 chr2:78408200-78408600 Enhancers HUES48 Cell Line embryonic stem cell
10 chr2:78408200-78408600 Enhancers HUES6 Cell Line embryonic stem cell
11 chr2:78408200-78408600 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr2:78413600-78414600 Enhancers HepG2 liver
13 chr2:78414600-78418600 Weak transcription HepG2 liver
14 chr2:78418600-78418800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr2:78418600-78419000 Enhancers HepG2 liver
16 chr2:78418800-78428000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr2:78419000-78432400 Weak transcription HepG2 liver
18 chr2:78428000-78431200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:78428200-78428600 Active TSS Brain Anterior Caudate brain
20 chr2:78428400-78428800 Active TSS Brain Angular Gyrus brain
21 chr2:78428400-78428800 Active TSS Brain Cingulate Gyrus brain
22 chr2:78428400-78428800 Active TSS Brain Inferior Temporal Lobe brain
23 chr2:78428400-78428800 Active TSS Brain Substantia Nigra brain
24 chr2:78428400-78430000 Active TSS Brain Hippocampus Middle brain
25 chr2:78428800-78429600 Weak transcription Brain Inferior Temporal Lobe brain
26 chr2:78428800-78429600 Weak transcription Brain Substantia Nigra brain
27 chr2:78428800-78430400 Weak transcription Brain Cingulate Gyrus brain
28 chr2:78429600-78430000 Active TSS Brain Inferior Temporal Lobe brain
29 chr2:78429600-78430000 Active TSS Brain Substantia Nigra brain
30 chr2:78430000-78430400 Flanking Active TSS Brain Hippocampus Middle brain
31 chr2:78430000-78430600 Weak transcription Brain Substantia Nigra brain
32 chr2:78430200-78430800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
33 chr2:78430400-78430800 Enhancers Brain Cingulate Gyrus brain
34 chr2:78430400-78430800 Enhancers Brain Hippocampus Middle brain
35 chr2:78430600-78430800 Enhancers Brain Inferior Temporal Lobe brain
36 chr2:78430600-78431200 Enhancers Brain Substantia Nigra brain
37 chr2:78445400-78445800 Enhancers ES-WA7 Cell Line embryonic stem cell
38 chr2:78445600-78446200 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr2:78445800-78446200 Enhancers HUES48 Cell Line embryonic stem cell
40 chr2:78447400-78448200 Enhancers Brain Hippocampus Middle brain
41 chr2:78447600-78448400 Enhancers Brain Inferior Temporal Lobe brain
42 chr2:78448200-78453200 Weak transcription Brain Hippocampus Middle brain
43 chr2:78448400-78448800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr2:78448800-78449400 Enhancers Brain Inferior Temporal Lobe brain
45 chr2:78453200-78454000 ZNF genes & repeats Brain Hippocampus Middle brain
46 chr2:78454000-78454400 Weak transcription Brain Hippocampus Middle brain
47 chr2:78459800-78472400 Weak transcription HepG2 liver
48 chr2:78460800-78462000 Enhancers Brain Substantia Nigra brain
49 chr2:78467000-78467200 Enhancers Brain Hippocampus Middle brain
50 chr2:78467000-78468000 Weak transcription Brain Substantia Nigra brain

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