Variant report

Variant nsv1010237
Chromosome Location chr2:53072736-53116413
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:53079400-53080400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
2 chr2:53083200-53083400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr2:53083800-53085800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr2:53085800-53090600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr2:53087400-53088000 Enhancers A549 lung
6 chr2:53088000-53088800 Weak transcription A549 lung
7 chr2:53088600-53090400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr2:53088800-53089000 Enhancers A549 lung
9 chr2:53089000-53089400 Weak transcription A549 lung
10 chr2:53089400-53090200 Enhancers A549 lung
11 chr2:53089800-53090200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr2:53089800-53090200 Weak transcription NHDF-Ad bronchial
13 chr2:53090200-53090400 Enhancers NHDF-Ad bronchial
14 chr2:53090200-53091000 Weak transcription A549 lung
15 chr2:53090200-53093600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr2:53090400-53091800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:53090400-53096200 Weak transcription NHDF-Ad bronchial
18 chr2:53090600-53091000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:53091000-53091200 Enhancers A549 lung
20 chr2:53091600-53095600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr2:53091800-53092600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr2:53092600-53093400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:53093400-53094400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:53093400-53095000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr2:53093600-53094200 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr2:53093600-53095000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:53093600-53095200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr2:53094000-53094400 Enhancers Fetal Lung lung
29 chr2:53094400-53094800 Enhancers HUES64 Cell Line embryonic stem cell
30 chr2:53094400-53108600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:53095000-53096000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:53095800-53096400 Enhancers HUES6 Cell Line embryonic stem cell
33 chr2:53096000-53096400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:53096000-53096600 Enhancers ES-I3 Cell Line embryonic stem cell
35 chr2:53096200-53096400 Enhancers NHDF-Ad bronchial
36 chr2:53101800-53102600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr2:53102600-53108200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr2:53104000-53104200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:53104200-53104600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr2:53104400-53107200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:53104600-53104800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:53104600-53105600 Enhancers Fetal Stomach stomach
43 chr2:53104600-53105600 Enhancers Pancreas Pancrea
44 chr2:53104600-53105600 Enhancers Stomach Smooth Muscle stomach
45 chr2:53104600-53105600 Enhancers A549 lung
46 chr2:53105400-53107600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr2:53105600-53108200 Weak transcription A549 lung
48 chr2:53105600-53121800 Weak transcription Pancreas Pancrea
49 chr2:53106800-53107000 Enhancers Colon Smooth Muscle Colon
50 chr2:53107200-53109000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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