Variant report

Variant nsv1010346
Chromosome Location chr1:152761911-152787707
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:152765600-152765800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:152765800-152766000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:152766000-152767800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr1:152766800-152767800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:152767600-152769600 Enhancers Cortex derived primary cultured neurospheres brain
6 chr1:152767800-152769000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:152768000-152769000 Enhancers Brain Hippocampus Middle brain
8 chr1:152769400-152769800 Enhancers Spleen Spleen
9 chr1:152769600-152770200 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:152770200-152770400 Enhancers Cortex derived primary cultured neurospheres brain
11 chr1:152778200-152778800 Enhancers HMEC breast
12 chr1:152778400-152779400 Enhancers Esophagus oesophagus
13 chr1:152778400-152779600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:152778400-152779600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:152778800-152779000 Bivalent Enhancer Small Intestine intestine
16 chr1:152778800-152779000 Enhancers NHEK skin
17 chr1:152778800-152779200 Flanking Active TSS HMEC breast
18 chr1:152778800-152779600 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr1:152778800-152779600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:152779000-152779400 Flanking Active TSS NHEK skin
21 chr1:152779200-152779600 Enhancers HMEC breast
22 chr1:152779400-152779600 Enhancers NHEK skin
23 chr1:152779400-152783600 Weak transcription Esophagus oesophagus
24 chr1:152779600-152783000 Weak transcription NHEK skin
25 chr1:152779600-152783200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:152779600-152783200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:152779600-152783400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:152779600-152783400 Weak transcription HMEC breast
29 chr1:152779600-152783600 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:152783000-152784200 Enhancers NHEK skin
31 chr1:152783200-152784400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:152783200-152784400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:152783400-152784200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:152783400-152784400 Enhancers HMEC breast
35 chr1:152783600-152784000 Active TSS Gastric stomach
36 chr1:152783600-152784200 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr1:152783600-152784200 Enhancers Esophagus oesophagus
38 chr1:152784200-152789400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:152784200-152789600 Weak transcription NHEK skin
40 chr1:152784400-152789600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:152784400-152789600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:152784400-152789600 Weak transcription HMEC breast
43 chr1:152785400-152786000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell

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