No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs557334880 |
chr1:227199494-227199495 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs116735666 |
chr1:227199514-227199515 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs200031133 |
chr1:227199515-227199516 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs577098214 |
chr1:227199605-227199606 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs116507347 |
chr1:227199617-227199618 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs184456697 |
chr1:227199665-227199666 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs59945801 |
chr1:227199679-227199680 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
8 |
rs541866533 |
chr1:227199687-227199688 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs145412525 |
chr1:227199696-227199697 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs1929862 |
chr1:227199718-227199719 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
11 |
rs530606331 |
chr1:227199767-227199768 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs527486652 |
chr1:227199845-227199846 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs571799376 |
chr1:227199889-227199890 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs530401942 |
chr1:227199929-227199930 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs542841507 |
chr1:227199983-227199984 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs190622918 |
chr1:227200018-227200019 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs182052042 |
chr1:227200059-227200060 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs554486277 |
chr1:227200074-227200075 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs550235241 |
chr1:227200093-227200094 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs4653474 |
chr1:227200100-227200101 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs576490930 |
chr1:227200145-227200146 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs61834002 |
chr1:227200159-227200160 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs139421460 |
chr1:227200168-227200169 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs186465836 |
chr1:227200205-227200206 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs558512286 |
chr1:227200303-227200304 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs576965133 |
chr1:227200311-227200312 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs541338290 |
chr1:227200387-227200388 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs534815159 |
chr1:227200422-227200423 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs115486726 |
chr1:227200510-227200511 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs190457061 |
chr1:227200522-227200523 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs181672222 |
chr1:227200542-227200543 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs61834003 |
chr1:227200570-227200571 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
33 |
rs530557550 |
chr1:227200608-227200609 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs563672835 |
chr1:227200676-227200677 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs545877741 |
chr1:227200682-227200683 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs2183835 |
chr1:227200718-227200719 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs532696599 |
chr1:227200759-227200760 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs543172532 |
chr1:227200779-227200780 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs186373437 |
chr1:227200846-227200847 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs6704144 |
chr1:227201030-227201031 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs530310130 |
chr1:227201050-227201051 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs12117027 |
chr1:227201085-227201086 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs542850219 |
chr1:227201096-227201097 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs548214976 |
chr1:227201097-227201098 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs570023516 |
chr1:227201098-227201099 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs199751667 |
chr1:227201106-227201107 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs558963964 |
chr1:227201172-227201173 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs570568736 |
chr1:227201274-227201275 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs534780031 |
chr1:227201288-227201289 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs182752839 |
chr1:227201291-227201292 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|