Variant report

Variant nsv1010881
Chromosome Location chr4:54471545-54494983
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54463800-54471800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr4:54470600-54471800 Enhancers Placenta Placenta
3 chr4:54471800-54472400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr4:54472800-54473400 Weak transcription Right Ventricle heart
5 chr4:54474800-54475400 ZNF genes & repeats GM12878-XiMat blood
6 chr4:54480600-54480800 Enhancers Rectal Mucosa Donor 29 rectum
7 chr4:54480600-54481800 Enhancers Fetal Intestine Large intestine
8 chr4:54481400-54481800 Enhancers Pancreas Pancrea
9 chr4:54481800-54482600 Weak transcription Pancreas Pancrea
10 chr4:54481800-54484600 Weak transcription Fetal Intestine Large intestine
11 chr4:54482600-54482800 Enhancers Pancreas Pancrea
12 chr4:54482600-54483000 Enhancers Small Intestine intestine
13 chr4:54482800-54484600 Weak transcription Pancreas Pancrea
14 chr4:54483200-54483800 ZNF genes & repeats GM12878-XiMat blood
15 chr4:54483200-54484600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr4:54484600-54484800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
17 chr4:54484600-54484800 Enhancers Pancreas Pancrea
18 chr4:54484600-54485000 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr4:54484600-54485000 Enhancers Fetal Intestine Large intestine
20 chr4:54484600-54485200 Enhancers Esophagus oesophagus
21 chr4:54484800-54487800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr4:54485200-54505800 Weak transcription Esophagus oesophagus
23 chr4:54485400-54486400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr4:54485600-54485800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr4:54485600-54486000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr4:54486200-54486800 Enhancers Brain Germinal Matrix brain
27 chr4:54486400-54486800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr4:54486800-54489600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr4:54487200-54487600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr4:54487600-54488200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr4:54487800-54489600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr4:54488200-54488400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr4:54488200-54489400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr4:54488400-54488600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr4:54488400-54488800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr4:54488400-54488800 Enhancers Hela-S3 cervix
37 chr4:54488400-54488800 Enhancers Osteobl bone
38 chr4:54488400-54489000 Enhancers HMEC breast
39 chr4:54488400-54489600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr4:54488600-54488800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr4:54488600-54489000 Enhancers Muscle Satellite Cultured Cells --
42 chr4:54488600-54489400 Enhancers NHDF-Ad bronchial
43 chr4:54488600-54489600 Enhancers Placenta Placenta
44 chr4:54488800-54489400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr4:54489400-54490600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr4:54489400-54490800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr4:54489600-54492600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr4:54489600-54492600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr4:54489600-54495800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr4:54490600-54491000 Enhancers Ovary ovary

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