Variant report

Variant nsv1010936
Chromosome Location chr2:234549011-234640221
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:501 , 50 per page) page: 1 2 3 4 5 6 7 ... 11
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234547800-234554000 Weak transcription Colonic Mucosa Colon
2 chr2:234548200-234549400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr2:234549400-234550000 Enhancers Rectal Mucosa Donor 31 rectum
4 chr2:234549400-234550000 Enhancers Stomach Mucosa stomach
5 chr2:234550000-234551400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:234550000-234551400 Weak transcription Stomach Mucosa stomach
7 chr2:234551400-234551600 Enhancers Rectal Mucosa Donor 31 rectum
8 chr2:234551400-234551800 Enhancers Stomach Mucosa stomach
9 chr2:234551600-234551800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
10 chr2:234551600-234551800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr2:234551600-234551800 Enhancers Esophagus oesophagus
12 chr2:234551600-234553800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:234551800-234559200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr2:234552400-234552600 Enhancers Esophagus oesophagus
15 chr2:234553800-234554000 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr2:234553800-234554600 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
17 chr2:234554000-234554800 ZNF genes & repeats Colonic Mucosa Colon
18 chr2:234554200-234555000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
19 chr2:234554600-234587800 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr2:234555000-234559600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr2:234559000-234559600 Enhancers NHEK skin
22 chr2:234559000-234560400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:234559200-234560000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:234559200-234560000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr2:234559400-234559800 Enhancers HMEC breast
26 chr2:234559600-234559800 Enhancers Rectal Mucosa Donor 29 rectum
27 chr2:234559600-234560000 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr2:234559600-234560000 Enhancers A549 lung
29 chr2:234559600-234560000 Flanking Active TSS NHEK skin
30 chr2:234559800-234592800 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr2:234560000-234560600 Enhancers NHEK skin
32 chr2:234563200-234563600 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr2:234563200-234564200 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr2:234563200-234564200 Enhancers Duodenum Mucosa Duodenum
35 chr2:234563200-234564200 Enhancers Stomach Mucosa stomach
36 chr2:234563800-234564200 Enhancers Liver Liver
37 chr2:234563800-234565200 Enhancers GM12878-XiMat blood
38 chr2:234564200-234565200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr2:234564200-234566800 Weak transcription Liver Liver
40 chr2:234565200-234565400 Enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr2:234566800-234568400 Enhancers Liver Liver
42 chr2:234567000-234572000 Weak transcription Colonic Mucosa Colon
43 chr2:234568400-234569800 Weak transcription Liver Liver
44 chr2:234569800-234571400 Enhancers Liver Liver
45 chr2:234570000-234570600 Enhancers A549 lung
46 chr2:234570600-234572400 Weak transcription A549 lung
47 chr2:234577400-234578400 Enhancers A549 lung
48 chr2:234577400-234579800 Enhancers Liver Liver
49 chr2:234579800-234580600 Flanking Active TSS Liver Liver
50 chr2:234579800-234580600 Enhancers A549 lung

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