Variant report

Variant nsv1011975
Chromosome Location chr2:54475866-54495222
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:135 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54449800-54535200 Weak transcription Primary T cells from cord blood blood
2 chr2:54452800-54490200 Weak transcription Primary B cells from cord blood blood
3 chr2:54455800-54476000 Weak transcription K562 blood
4 chr2:54456400-54487200 Weak transcription Psoas Muscle Psoas
5 chr2:54468400-54492200 Weak transcription HSMMtube muscle
6 chr2:54468600-54481600 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr2:54469400-54480800 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr2:54472800-54482400 Weak transcription Fetal Stomach stomach
9 chr2:54474200-54485600 Weak transcription Stomach Smooth Muscle stomach
10 chr2:54474600-54478800 Weak transcription HepG2 liver
11 chr2:54474600-54481800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr2:54474600-54482600 Weak transcription Right Ventricle heart
13 chr2:54474600-54484200 Weak transcription Rectal Smooth Muscle rectum
14 chr2:54476000-54476200 ZNF genes & repeats K562 blood
15 chr2:54476200-54478800 Weak transcription K562 blood
16 chr2:54477800-54482800 Weak transcription Pancreas Pancrea
17 chr2:54478200-54478600 Enhancers Pancreatic Islets Pancreatic Islet
18 chr2:54478800-54479200 Enhancers HepG2 liver
19 chr2:54478800-54479400 ZNF genes & repeats K562 blood
20 chr2:54479200-54487200 Weak transcription HepG2 liver
21 chr2:54479200-54489200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:54479400-54479600 Weak transcription K562 blood
23 chr2:54479600-54480800 Active TSS K562 blood
24 chr2:54479600-54482600 Weak transcription Liver Liver
25 chr2:54479800-54489200 Weak transcription Gastric stomach
26 chr2:54480000-54481600 Weak transcription Primary B cells from peripheral blood blood
27 chr2:54480200-54482400 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr2:54480400-54485400 Weak transcription Fetal Lung lung
29 chr2:54480600-54481000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr2:54480600-54481000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
31 chr2:54480600-54481600 Enhancers Brain Substantia Nigra brain
32 chr2:54480800-54481000 Enhancers Brain Inferior Temporal Lobe brain
33 chr2:54480800-54482000 Transcr. at gene 5' and 3' K562 blood
34 chr2:54480800-54483400 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr2:54481000-54482600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:54481000-54502600 Weak transcription Brain Inferior Temporal Lobe brain
37 chr2:54481400-54481800 Weak transcription Fetal Intestine Small intestine
38 chr2:54481600-54482200 Strong transcription Skeletal Muscle Female skeletal muscle
39 chr2:54481600-54482800 Strong transcription Primary B cells from peripheral blood blood
40 chr2:54481600-54484200 Weak transcription Brain Substantia Nigra brain
41 chr2:54481600-54487200 Weak transcription Spleen Spleen
42 chr2:54481800-54483200 Strong transcription Skeletal Muscle Male skeletal muscle
43 chr2:54481800-54483600 ZNF genes & repeats Fetal Intestine Small intestine
44 chr2:54482000-54483800 Active TSS K562 blood
45 chr2:54482200-54482600 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr2:54482200-54482800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:54482200-54482800 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr2:54482400-54482600 Strong transcription Primary T helper naive cells fromperipheralblood blood
49 chr2:54482400-54483400 ZNF genes & repeats Fetal Stomach stomach
50 chr2:54482600-54483000 ZNF genes & repeats Liver Liver

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