Variant report
Variant | nsv1011975 |
---|---|
Chromosome Location | chr2:54475866-54495222 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:54449800-54535200 | Weak transcription | Primary T cells from cord blood | blood |
2 | chr2:54452800-54490200 | Weak transcription | Primary B cells from cord blood | blood |
3 | chr2:54455800-54476000 | Weak transcription | K562 | blood |
4 | chr2:54456400-54487200 | Weak transcription | Psoas Muscle | Psoas |
5 | chr2:54468400-54492200 | Weak transcription | HSMMtube | muscle |
6 | chr2:54468600-54481600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
7 | chr2:54469400-54480800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
8 | chr2:54472800-54482400 | Weak transcription | Fetal Stomach | stomach |
9 | chr2:54474200-54485600 | Weak transcription | Stomach Smooth Muscle | stomach |
10 | chr2:54474600-54478800 | Weak transcription | HepG2 | liver |
11 | chr2:54474600-54481800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
12 | chr2:54474600-54482600 | Weak transcription | Right Ventricle | heart |
13 | chr2:54474600-54484200 | Weak transcription | Rectal Smooth Muscle | rectum |
14 | chr2:54476000-54476200 | ZNF genes & repeats | K562 | blood |
15 | chr2:54476200-54478800 | Weak transcription | K562 | blood |
16 | chr2:54477800-54482800 | Weak transcription | Pancreas | Pancrea |
17 | chr2:54478200-54478600 | Enhancers | Pancreatic Islets | Pancreatic Islet |
18 | chr2:54478800-54479200 | Enhancers | HepG2 | liver |
19 | chr2:54478800-54479400 | ZNF genes & repeats | K562 | blood |
20 | chr2:54479200-54487200 | Weak transcription | HepG2 | liver |
21 | chr2:54479200-54489200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
22 | chr2:54479400-54479600 | Weak transcription | K562 | blood |
23 | chr2:54479600-54480800 | Active TSS | K562 | blood |
24 | chr2:54479600-54482600 | Weak transcription | Liver | Liver |
25 | chr2:54479800-54489200 | Weak transcription | Gastric | stomach |
26 | chr2:54480000-54481600 | Weak transcription | Primary B cells from peripheral blood | blood |
27 | chr2:54480200-54482400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
28 | chr2:54480400-54485400 | Weak transcription | Fetal Lung | lung |
29 | chr2:54480600-54481000 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
30 | chr2:54480600-54481000 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
31 | chr2:54480600-54481600 | Enhancers | Brain Substantia Nigra | brain |
32 | chr2:54480800-54481000 | Enhancers | Brain Inferior Temporal Lobe | brain |
33 | chr2:54480800-54482000 | Transcr. at gene 5' and 3' | K562 | blood |
34 | chr2:54480800-54483400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
35 | chr2:54481000-54482600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
36 | chr2:54481000-54502600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
37 | chr2:54481400-54481800 | Weak transcription | Fetal Intestine Small | intestine |
38 | chr2:54481600-54482200 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
39 | chr2:54481600-54482800 | Strong transcription | Primary B cells from peripheral blood | blood |
40 | chr2:54481600-54484200 | Weak transcription | Brain Substantia Nigra | brain |
41 | chr2:54481600-54487200 | Weak transcription | Spleen | Spleen |
42 | chr2:54481800-54483200 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
43 | chr2:54481800-54483600 | ZNF genes & repeats | Fetal Intestine Small | intestine |
44 | chr2:54482000-54483800 | Active TSS | K562 | blood |
45 | chr2:54482200-54482600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
46 | chr2:54482200-54482800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
47 | chr2:54482200-54482800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
48 | chr2:54482400-54482600 | Strong transcription | Primary T helper naive cells fromperipheralblood | blood |
49 | chr2:54482400-54483400 | ZNF genes & repeats | Fetal Stomach | stomach |
50 | chr2:54482600-54483000 | ZNF genes & repeats | Liver | Liver |