Variant report

Variant nsv1012050
Chromosome Location chr1:223824652-223843610
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:265 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223808600-223825000 Weak transcription Gastric stomach
2 chr1:223809600-223827600 Weak transcription Colonic Mucosa Colon
3 chr1:223822200-223833400 Weak transcription Pancreas Pancrea
4 chr1:223823200-223824800 Weak transcription Stomach Mucosa stomach
5 chr1:223823200-223825000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:223823200-223826400 Weak transcription Liver Liver
7 chr1:223823400-223826400 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:223824800-223825000 Enhancers Stomach Mucosa stomach
9 chr1:223825000-223825200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:223825000-223825200 Bivalent Enhancer Fetal Muscle Trunk muscle
11 chr1:223825000-223825200 ZNF genes & repeats Gastric stomach
12 chr1:223825000-223825200 Enhancers Sigmoid Colon Sigmoid Colon
13 chr1:223825000-223825400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:223825000-223826000 Genic enhancers Stomach Mucosa stomach
15 chr1:223825200-223826400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:223825200-223827400 Weak transcription Gastric stomach
17 chr1:223826000-223826400 Enhancers Stomach Mucosa stomach
18 chr1:223826400-223827200 Weak transcription Stomach Mucosa stomach
19 chr1:223826400-223830400 Enhancers Sigmoid Colon Sigmoid Colon
20 chr1:223826400-223831000 Enhancers Rectal Mucosa Donor 31 rectum
21 chr1:223826400-223831200 Enhancers Liver Liver
22 chr1:223827200-223831000 Enhancers Stomach Mucosa stomach
23 chr1:223827400-223827600 Enhancers Gastric stomach
24 chr1:223827400-223827800 ZNF genes & repeats Duodenum Mucosa Duodenum
25 chr1:223827600-223828200 Enhancers Colonic Mucosa Colon
26 chr1:223827600-223828200 Weak transcription Gastric stomach
27 chr1:223827800-223828400 Weak transcription Duodenum Mucosa Duodenum
28 chr1:223828000-223828200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:223828000-223830400 Enhancers Rectal Mucosa Donor 29 rectum
30 chr1:223828200-223829200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:223828200-223829400 Enhancers Gastric stomach
32 chr1:223828200-223833400 Weak transcription Colonic Mucosa Colon
33 chr1:223828400-223830400 Enhancers Duodenum Mucosa Duodenum
34 chr1:223828600-223829200 Enhancers Fetal Intestine Large intestine
35 chr1:223828600-223829600 Enhancers Primary monocytes fromperipheralblood blood
36 chr1:223828600-223829600 Enhancers Psoas Muscle Psoas
37 chr1:223828800-223834000 Weak transcription Fetal Stomach stomach
38 chr1:223829200-223829400 Enhancers Lung lung
39 chr1:223829200-223829400 Bivalent Enhancer HUVEC blood vessel
40 chr1:223829200-223829600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:223829200-223829600 Weak transcription Fetal Intestine Large intestine
42 chr1:223829200-223829800 Enhancers NHEK skin
43 chr1:223829200-223830000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr1:223829200-223830200 Enhancers Pancreatic Islets Pancreatic Islet
45 chr1:223829200-223830800 Enhancers Fetal Intestine Small intestine
46 chr1:223829400-223829800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr1:223829400-223830800 Weak transcription Gastric stomach
48 chr1:223829400-223834000 Weak transcription Lung lung
49 chr1:223829600-223830200 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr1:223829600-223831000 Enhancers Fetal Intestine Large intestine

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