Variant report
Variant | nsv1012150 |
---|---|
Chromosome Location | chr2:53788495-53840009 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:53787400-53789200 | Weak transcription | Hela-S3 | cervix |
2 | chr2:53788200-53788800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
3 | chr2:53789200-53789600 | Enhancers | Brain Inferior Temporal Lobe | brain |
4 | chr2:53789200-53789800 | Enhancers | Hela-S3 | cervix |
5 | chr2:53789200-53790000 | Enhancers | Brain Hippocampus Middle | brain |
6 | chr2:53789200-53790000 | Enhancers | Brain Substantia Nigra | brain |
7 | chr2:53789400-53789800 | Enhancers | Brain Cingulate Gyrus | brain |
8 | chr2:53789400-53790000 | Enhancers | Placenta | Placenta |
9 | chr2:53790400-53791000 | Enhancers | Colon Smooth Muscle | Colon |
10 | chr2:53790600-53791200 | Enhancers | Rectal Smooth Muscle | rectum |
11 | chr2:53791000-53792400 | Weak transcription | Colon Smooth Muscle | Colon |
12 | chr2:53792400-53792600 | Enhancers | Colon Smooth Muscle | Colon |
13 | chr2:53794000-53794600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
14 | chr2:53794200-53795000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
15 | chr2:53795000-53808800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
16 | chr2:53795200-53796200 | Enhancers | Cortex derived primary cultured neurospheres | brain |
17 | chr2:53795600-53795800 | Active TSS | Dnd41 | blood |
18 | chr2:53795600-53796000 | Active TSS | Brain Substantia Nigra | brain |
19 | chr2:53795600-53796200 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
20 | chr2:53795600-53796200 | Active TSS | Aorta | Aorta |
21 | chr2:53795600-53796200 | Enhancers | Brain Anterior Caudate | brain |
22 | chr2:53795600-53796200 | Active TSS | A549 | lung |
23 | chr2:53795600-53796200 | Active TSS | Osteobl | bone |
24 | chr2:53795600-53797400 | Enhancers | Pancreatic Islets | Pancreatic Islet |
25 | chr2:53795800-53796000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
26 | chr2:53795800-53796000 | Enhancers | Fetal Muscle Leg | muscle |
27 | chr2:53795800-53796000 | Flanking Active TSS | Dnd41 | blood |
28 | chr2:53795800-53796200 | Enhancers | Duodenum Smooth Muscle | Duodenum |
29 | chr2:53795800-53796400 | Enhancers | Brain Hippocampus Middle | brain |
30 | chr2:53796000-53796200 | Enhancers | Brain Substantia Nigra | brain |
31 | chr2:53796200-53799000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
32 | chr2:53796200-53799000 | Weak transcription | Brain Substantia Nigra | brain |
33 | chr2:53796200-53802800 | Weak transcription | Brain Anterior Caudate | brain |
34 | chr2:53796400-53799200 | Weak transcription | Brain Hippocampus Middle | brain |
35 | chr2:53797200-53798200 | Enhancers | Pancreas | Pancrea |
36 | chr2:53797400-53797800 | Active TSS | Pancreatic Islets | Pancreatic Islet |
37 | chr2:53799000-53799400 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
38 | chr2:53799000-53799800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
39 | chr2:53799000-53800400 | Enhancers | Brain Substantia Nigra | brain |
40 | chr2:53799200-53800000 | Enhancers | Brain Cingulate Gyrus | brain |
41 | chr2:53799200-53800200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
42 | chr2:53799200-53800200 | Enhancers | Brain Hippocampus Middle | brain |
43 | chr2:53799400-53802600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
44 | chr2:53799600-53800000 | Enhancers | Brain Inferior Temporal Lobe | brain |
45 | chr2:53799800-53801800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
46 | chr2:53800200-53803000 | Weak transcription | Brain Hippocampus Middle | brain |
47 | chr2:53801800-53804400 | Enhancers | Cortex derived primary cultured neurospheres | brain |
48 | chr2:53802200-53804400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
49 | chr2:53802400-53804200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
50 | chr2:53802600-53802800 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |