Variant report

Variant nsv1012400
Chromosome Location chr3:46801805-46872992
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:475 , 50 per page) page: 1 2 3 4 5 6 7 ... 10
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46801000-46802000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
2 chr3:46801000-46802000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr3:46801000-46802000 Enhancers iPS-18 Cell Line embryonic stem cell
4 chr3:46801200-46802000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:46801400-46802000 Enhancers Skeletal Muscle Male skeletal muscle
6 chr3:46801600-46803400 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr3:46802000-46804400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr3:46804600-46805200 Enhancers HMEC breast
9 chr3:46804600-46805400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr3:46804800-46805000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr3:46804800-46805200 Enhancers NHEK skin
12 chr3:46805000-46809200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr3:46806000-46806200 Weak transcription Pancreas Pancrea
14 chr3:46806200-46806400 ZNF genes & repeats Pancreas Pancrea
15 chr3:46809600-46810000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
16 chr3:46819200-46820200 Enhancers Primary B cells from cord blood blood
17 chr3:46819600-46820000 Enhancers Primary B cells from peripheral blood blood
18 chr3:46829800-46831000 Active TSS ES-I3 Cell Line embryonic stem cell
19 chr3:46830400-46831000 Active TSS HUES6 Cell Line embryonic stem cell
20 chr3:46830800-46831200 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr3:46844000-46844400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr3:46844000-46844400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr3:46844400-46847400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr3:46845600-46846400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr3:46846400-46851400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr3:46847800-46849600 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr3:46848400-46852800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr3:46848600-46849200 Enhancers Fetal Intestine Large intestine
29 chr3:46849000-46852600 Weak transcription H9 Cell Line embryonic stem cell
30 chr3:46849200-46851800 Weak transcription Fetal Intestine Large intestine
31 chr3:46849600-46849800 Genic enhancers Breast Myoepithelial Primary Cells Breast
32 chr3:46849800-46850000 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr3:46850000-46850400 Genic enhancers Breast Myoepithelial Primary Cells Breast
34 chr3:46850000-46850600 Enhancers GM12878-XiMat blood
35 chr3:46850000-46852600 Weak transcription Right Ventricle heart
36 chr3:46850200-46850400 Enhancers Fetal Thymus thymus
37 chr3:46850400-46850600 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr3:46850400-46851400 Weak transcription Fetal Thymus thymus
39 chr3:46850400-46853200 Weak transcription Fetal Intestine Small intestine
40 chr3:46850600-46850800 Enhancers Lung lung
41 chr3:46850600-46851800 Weak transcription GM12878-XiMat blood
42 chr3:46850600-46852000 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr3:46851000-46852200 Weak transcription Lung lung
44 chr3:46851000-46853600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr3:46851400-46852000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr3:46851400-46852200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr3:46851400-46852200 Enhancers Thymus Thymus
48 chr3:46851400-46853200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr3:46851400-46853200 Enhancers Fetal Thymus thymus
50 chr3:46851800-46852000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin

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