Variant report

Variant nsv1012551
Chromosome Location chr3:84235733-84550197
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:84215200-84248000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:84236800-84237600 Enhancers HUES6 Cell Line embryonic stem cell
3 chr3:84240400-84242200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
4 chr3:84242200-84243400 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr3:84243000-84243800 Enhancers HUES64 Cell Line embryonic stem cell
6 chr3:84243200-84243800 Enhancers HMEC breast
7 chr3:84243200-84243800 Enhancers NHEK skin
8 chr3:84243400-84243600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
9 chr3:84243400-84243800 Enhancers iPS-15b Cell Line embryonic stem cell
10 chr3:84245800-84246600 ZNF genes & repeats Adipose Nuclei Adipose
11 chr3:84246000-84246800 ZNF genes & repeats Pancreas Pancrea
12 chr3:84256600-84257800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:84256600-84259400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr3:84257800-84258800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr3:84258400-84259400 Enhancers HUES64 Cell Line embryonic stem cell
16 chr3:84258600-84259000 Enhancers Cortex derived primary cultured neurospheres brain
17 chr3:84258600-84259200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr3:84258600-84259600 Enhancers ES-I3 Cell Line embryonic stem cell
19 chr3:84258600-84259600 Enhancers HUES6 Cell Line embryonic stem cell
20 chr3:84258800-84259200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr3:84258800-84259200 Enhancers iPS-20b Cell Line embryonic stem cell
22 chr3:84258800-84259400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr3:84258800-84259600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr3:84258800-84259600 Enhancers HUES48 Cell Line embryonic stem cell
25 chr3:84258800-84259600 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr3:84268600-84268800 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr3:84268800-84269800 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr3:84269800-84270200 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr3:84270600-84274400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr3:84273800-84274200 Enhancers K562 blood
31 chr3:84282600-84283600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr3:84285400-84285800 Active TSS A549 lung
33 chr3:84287200-84287600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr3:84289400-84297800 Active TSS K562 blood
35 chr3:84307400-84308000 Enhancers HUES48 Cell Line embryonic stem cell
36 chr3:84313000-84313400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr3:84338000-84338800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr3:84341000-84341600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr3:84350800-84351200 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr3:84353000-84360000 Active TSS K562 blood
41 chr3:84391600-84391800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:84396400-84397000 Enhancers H1 Cell Line embryonic stem cell
43 chr3:84396800-84397200 Enhancers HUES6 Cell Line embryonic stem cell
44 chr3:84396800-84397200 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr3:84397000-84397800 Enhancers iPS-15b Cell Line embryonic stem cell
46 chr3:84436400-84437400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
47 chr3:84436600-84437000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:84484000-84485000 Enhancers Cortex derived primary cultured neurospheres brain
49 chr3:84484400-84485000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr3:84484400-84485200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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