Variant report

Variant nsv1012921
Chromosome Location chr3:46831949-46868816
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46844000-46844400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:46844000-46844400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr3:46844400-46847400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:46845600-46846400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr3:46846400-46851400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr3:46847800-46849600 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr3:46848400-46852800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr3:46848600-46849200 Enhancers Fetal Intestine Large intestine
9 chr3:46849000-46852600 Weak transcription H9 Cell Line embryonic stem cell
10 chr3:46849200-46851800 Weak transcription Fetal Intestine Large intestine
11 chr3:46849600-46849800 Genic enhancers Breast Myoepithelial Primary Cells Breast
12 chr3:46849800-46850000 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr3:46850000-46850400 Genic enhancers Breast Myoepithelial Primary Cells Breast
14 chr3:46850000-46850600 Enhancers GM12878-XiMat blood
15 chr3:46850000-46852600 Weak transcription Right Ventricle heart
16 chr3:46850200-46850400 Enhancers Fetal Thymus thymus
17 chr3:46850400-46850600 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr3:46850400-46851400 Weak transcription Fetal Thymus thymus
19 chr3:46850400-46853200 Weak transcription Fetal Intestine Small intestine
20 chr3:46850600-46850800 Enhancers Lung lung
21 chr3:46850600-46851800 Weak transcription GM12878-XiMat blood
22 chr3:46850600-46852000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr3:46851000-46852200 Weak transcription Lung lung
24 chr3:46851000-46853600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr3:46851400-46852000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr3:46851400-46852200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr3:46851400-46852200 Enhancers Thymus Thymus
28 chr3:46851400-46853200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
29 chr3:46851400-46853200 Enhancers Fetal Thymus thymus
30 chr3:46851800-46852000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
31 chr3:46851800-46852000 Enhancers Fetal Intestine Large intestine
32 chr3:46851800-46852200 Enhancers HUES6 Cell Line embryonic stem cell
33 chr3:46851800-46852400 Enhancers GM12878-XiMat blood
34 chr3:46851800-46853400 Enhancers K562 blood
35 chr3:46851800-46856800 Enhancers Fetal Heart heart
36 chr3:46852000-46853000 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr3:46852000-46853000 Enhancers Spleen Spleen
38 chr3:46852000-46853200 Enhancers Placenta Amnion Placenta Amnion
39 chr3:46852200-46852400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr3:46852200-46852400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr3:46852200-46852600 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr3:46852200-46852600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr3:46852200-46852600 Active TSS Thymus Thymus
44 chr3:46852200-46853400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr3:46852200-46853600 Enhancers Lung lung
46 chr3:46852400-46852800 Enhancers Primary T helper cells PMA-I stimulated --
47 chr3:46852400-46853200 Weak transcription Right Atrium heart
48 chr3:46852400-46853800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr3:46852600-46852800 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
50 chr3:46852600-46852800 Bivalent Enhancer H1 Cell Line embryonic stem cell

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