Variant report

Variant	nsv1013103
Chromosome Location	chr1:196709223-196788989
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:196712502-196712701	K562	blood:	n/a	n/a
2	BATF	chr1:196743800-196744098	GM12878	blood:	n/a	chr1:196743977-196743985
3	CEBPB	chr1:196745101-196745132	IMR90	lung:	n/a	n/a
4	CTCF	chr1:196748360-196748510	Hela-S3	cervix:	n/a	n/a
5	CTCF	chr1:196712560-196712710	NHDF-neo	bronchial:	n/a	n/a
6	CTCF	chr1:196748320-196748470	AG10803	skin:	n/a	n/a
7	CTCF	chr1:196712620-196712770	HAc	cerebellar:	n/a	n/a
8	CTCF	chr1:196712425-196712634	K562	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
9	CTCF	chr1:196712460-196712610	HAc	cerebellar:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
10	CTCF	chr1:196712500-196712650	WERI-Rb-1	eye:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
11	CTCF	chr1:196712480-196712630	SAEC	small airway:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
12	CTCF	chr1:196712546-196712621	ProgFib	skin:	n/a	chr1:196712547-196712554
13	CTCF	chr1:196712460-196712610	GM12869	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
14	CTCF	chr1:196712443-196712734	H1-hESC	embryonic stem cell:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
15	CTCF	chr1:196712500-196712650	HMEC	breast:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
16	CTCF	chr1:196712342-196712724	HepG2	liver:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
17	CTCF	chr1:196712500-196712650	GM12878	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
18	CTCF	chr1:196712471-196712652	HepG2	liver:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
19	CTCF	chr1:196712580-196712730	HRPEpiC	eye:	n/a	n/a
20	CTCF	chr1:196712480-196712630	HepG2	liver:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
21	CTCF	chr1:196712480-196712630	BE2_C	brain:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
22	CTCF	chr1:196712488-196712599	Lung_OC	lung:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
23	CTCF	chr1:196712480-196712630	HA-sp	spinal cord:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
24	CTCF	chr1:196712459-196712633	MCF-7	breast:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
25	CTCF	chr1:196712500-196712650	HCT-116	colon:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
26	CTCF	chr1:196712520-196712670	GM06990	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
27	CTCF	chr1:196712460-196712608	GM10266	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
28	CTCF	chr1:196748380-196748530	GM12872	blood:	n/a	n/a
29	CTCF	chr1:196712560-196712710	HFF-Myc	foreskin:	n/a	n/a
30	CTCF	chr1:196712480-196712630	AoAF	blood vessel:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
31	CTCF	chr1:196712540-196712690	HRPEpiC	eye:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
32	CTCF	chr1:196748320-196748470	GM12864	blood:	n/a	n/a
33	CTCF	chr1:196712560-196712710	GM12866	blood:	n/a	n/a
34	CTCF	chr1:196712520-196712670	GM12872	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
35	CTCF	chr1:196712620-196712770	HVMF	connective:	n/a	n/a
36	CTCF	chr1:196712520-196712670	HEEpiC	esophagus:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
37	CTCF	chr1:196748400-196748550	GM12873	blood:	n/a	n/a
38	CTCF	chr1:196712506-196712675	MCF-7	breast:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
39	CTCF	chr1:196712269-196712787	A549	lung:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
40	CTCF	chr1:196712540-196712690	HVMF	connective:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
41	CTCF	chr1:196748320-196748470	GM12873	blood:	n/a	n/a
42	CTCF	chr1:196773125-196773156	Spleen_OC	spleen:	n/a	n/a
43	CTCF	chr1:196748360-196748510	HPAF	blood vessel:	n/a	n/a
44	CTCF	chr1:196712380-196712530	NHDF-neo	bronchial:	n/a	n/a
45	CTCF	chr1:196712360-196712510	HCM	heart:	n/a	n/a
46	CTCF	chr1:196748440-196748590	HUVEC	blood vessel:	n/a	n/a
47	CTCF	chr1:196712231-196712354	GM10266	blood:	n/a	n/a
48	CTCF	chr1:196777082-196777168	GM20000	blood:	n/a	n/a
49	CTCF	chr1:196748420-196748570	MCF-7	breast:	n/a	n/a
50	CTCF	chr1:196748480-196748630	RPTEC	kidney:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:196746875-196746925	HepG2	liver:	n/a
2	chr1:196746875-196746925	HAEpiC	amniotic membrane:	n/a
3	chr1:196743672-196743722	Hepatocyte	liver:	n/a
4	chr1:196787850-196787900	NH-A	brain:	n/a
5	chr1:196746875-196746925	HIPEpiC	eye:	n/a
6	chr1:196743672-196743722	AG09309	skin:	n/a
7	chr1:196787850-196787900	SK-N-SH	brain:	n/a
8	chr1:196746875-196746925	HCM	heart:	n/a
9	chr1:196743672-196743722	H1-hESC	embryonic stem cell:	embryo
10	chr1:196746875-196746925	HNPCEpiC	eye:	n/a
11	chr1:196746875-196746925	HCF	heart:	n/a
12	chr1:196743672-196743722	GM12878	blood:	n/a
13	chr1:196787850-196787900	HEEpiC	esophagus:	n/a
14	chr1:196743672-196743722	U87	brain:	n/a
15	chr1:196787850-196787900	PFSK-1	brain:	n/a
16	chr1:196743672-196743722	ECC-1	luminal epithelium:	n/a
17	chr1:196743672-196743722	GM06990	blood:	n/a
18	chr1:196746875-196746925	AG04449	skin:	fetal
19	chr1:196746875-196746925	HRE	kidney:	n/a
20	chr1:196746875-196746925	AG09309	skin:	n/a
21	chr1:196743672-196743722	HUVEC	blood vessel:	n/a
22	chr1:196787850-196787900	MCF10A-Er-Src	breast:	n/a
23	chr1:196787850-196787900	RPTEC	kidney:	n/a
24	chr1:196787850-196787900	GM19239	blood:	n/a
25	chr1:196743672-196743722	MCF10A-Er-Src	breast:	n/a
26	chr1:196746875-196746925	NHBE	bronchial:	n/a
27	chr1:196746875-196746925	NT2-D1	testis:	n/a
28	chr1:196746875-196746925	HL-60	blood:	n/a
29	chr1:196787850-196787900	HMEC	breast:	n/a
30	chr1:196787850-196787900	MCF-7	breast:	n/a
31	chr1:196787850-196787900	AG09309	skin:	n/a
32	chr1:196787850-196787900	GM12878	blood:	n/a
33	chr1:196743672-196743722	BJ	skin:	n/a
34	chr1:196743672-196743722	Caco-2	colon:	n/a
35	chr1:196746875-196746925	H1-hESC	embryonic stem cell:	embryo
36	chr1:196787850-196787900	HCT-116	colon:	n/a
37	chr1:196746875-196746925	HRPEpiC	eye:	n/a
38	chr1:196746875-196746925	PANC-1	pancreas:	n/a
39	chr1:196787850-196787900	GM06990	blood:	n/a
40	chr1:196743672-196743722	HEEpiC	esophagus:	n/a
41	chr1:196743672-196743722	HCPEpiC	choroid plexus:	n/a
42	chr1:196746875-196746925	AoSMC	blood vessel:	n/a
43	chr1:196787850-196787900	HepG2	liver:	n/a
44	chr1:196743672-196743722	PrEC	prostate:	n/a
45	chr1:196787850-196787900	NB4	blood:	n/a
46	chr1:196746875-196746925	HUVEC	blood vessel:	n/a
47	chr1:196746875-196746925	A549	lung:	n/a
48	chr1:196787850-196787900	ProgFib	skin:	n/a
49	chr1:196746875-196746925	BE2_C	brain:	n/a
50	chr1:196746875-196746925	HMEC	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:196734362..196735975-chr1:196744220..196746531,2	MCF-7	breast:
2	chr1:196711011..196712654-chr1:196796494..196798129,2	MCF-7	breast:
3	chr1:196734362..196735975-chr1:196744220..196746531,2	MCF-7	breast:
4	chr1:196711931..196712944-chr1:196796605..196797511,4	MCF-7	breast:
5	chr1:196706600..196708493-chr1:196711945..196714734,2	K562	blood:
6	chr1:196738269..196739930-chr1:196742962..196745311,2	MCF-7	breast:
7	chr1:196712193..196713017-chr1:197326079..197326750,3	MCF-7	breast:
8	chr1:196712121..196712996-chr1:197035666..197036522,2	MCF-7	breast:
9	chr1:196712168..196712942-chr1:196796703..196797590,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CFHR1-1	chr1:196758890-196759357	NONHSAT008599
2	lnc-CFHR2-1	chr1:196788893-196789032	NONHSAT008600
3	lnc-CFHR2-1	chr1:196788952-196789032	NONHSAT008601
4	lnc-CFHR1-1	chr1:196762447-196762763	NONHSAT008599

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	CFH	hsa-miR-146a-5p	chr1:196716478-196716499

Variant related genes	Relation type
CFHR2	TF binding region
CFHR1	TF binding region
CFHR3	TF binding region
CFHR2	CpG island
CFHR1	CpG island
CFHR3	CpG island
ENSG00000143278	chromatin interactions
ENSG00000116785	chromatin interactions

Extended variants
information (count: 2201 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:2201 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs424535	chr1:196709223-196709224	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs141601348	chr1:196709234-196709235	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs552858795	chr1:196709259-196709260	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs567903086	chr1:196709300-196709301	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs535312078	chr1:196709321-196709322	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs34557289	chr1:196709359-196709360	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs575217641	chr1:196709372-196709373	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs189159291	chr1:196709379-196709380	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs193067702	chr1:196709443-196709444	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs112452907	chr1:196709515-196709516	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs150713392	chr1:196709573-196709574	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs550942137	chr1:196709625-196709626	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs557890944	chr1:196709638-196709639	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs368319704	chr1:196709670-196709671	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs371965990	chr1:196709710-196709711	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs56050311	chr1:196709712-196709713	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs372283020	chr1:196709718-196709719	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs1065489	chr1:196709774-196709775	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs529491401	chr1:196709787-196709788	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs61755704	chr1:196709798-196709799	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs149474608	chr1:196709816-196709817	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs145975787	chr1:196709833-196709834	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs533238588	chr1:196709834-196709835	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs121913053	chr1:196709842-196709843	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs115722139	chr1:196709845-196709846	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs375951438	chr1:196709866-196709867	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs267598267	chr1:196709890-196709891	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs141804786	chr1:196709898-196709899	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs79934209	chr1:196709906-196709907	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs527724777	chr1:196709909-196709910	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs149938052	chr1:196709910-196709911	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs553471643	chr1:196709912-196709913	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs368886847	chr1:196709932-196709933	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs572034879	chr1:196709935-196709936	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs188452801	chr1:196709943-196709944	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs537015849	chr1:196709946-196709947	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs372923799	chr1:196709951-196709952	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs143385632	chr1:196710064-196710065	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs146737328	chr1:196710079-196710080	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs569037632	chr1:196710090-196710091	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs113990844	chr1:196710119-196710120	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs574535611	chr1:196710151-196710152	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs11582939	chr1:196710157-196710158	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs563645995	chr1:196710178-196710179	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs557878375	chr1:196710211-196710212	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs572749191	chr1:196710250-196710251	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs536374479	chr1:196710275-196710276	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs556077846	chr1:196710308-196710309	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs61822179	chr1:196710402-196710403	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs546664020	chr1:196710432-196710433	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	21611746	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	19010865	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Mental retardation	21062444	CNVD
Liver carcinoma	19366792	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:196691200-196718400	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr1:196702800-196709600	Weak transcription	Stomach Smooth Muscle	stomach
3	chr1:196705400-196709600	ZNF genes & repeats	Dnd41	blood
4	chr1:196706000-196710600	Strong transcription	HSMM	muscle
5	chr1:196706000-196711400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr1:196706600-196709400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr1:196706600-196710200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr1:196707000-196709400	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr1:196707000-196709400	Weak transcription	K562	blood
10	chr1:196707400-196722400	Weak transcription	Psoas Muscle	Psoas
11	chr1:196707800-196709400	ZNF genes & repeats	Duodenum Mucosa	Duodenum
12	chr1:196707800-196712600	Weak transcription	NH-A	brain
13	chr1:196708000-196719800	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr1:196708400-196709400	Weak transcription	Lung	lung
15	chr1:196708400-196711000	Weak transcription	Osteobl	bone
16	chr1:196708400-196711400	Strong transcription	Fetal Muscle Leg	muscle
17	chr1:196708400-196711600	Strong transcription	Ovary	ovary
18	chr1:196708400-196712000	Weak transcription	Small Intestine	intestine
19	chr1:196708400-196712800	Weak transcription	Fetal Stomach	stomach
20	chr1:196708400-196717200	Strong transcription	Liver	Liver
21	chr1:196708800-196709800	Weak transcription	Esophagus	oesophagus
22	chr1:196708800-196712600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr1:196708800-196718200	Weak transcription	Adipose Nuclei	Adipose
24	chr1:196709000-196709400	Strong transcription	Fetal Muscle Trunk	muscle
25	chr1:196709000-196712000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
26	chr1:196709000-196712600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr1:196709200-196710200	Weak transcription	Primary hematopoietic stem cells	blood
28	chr1:196709200-196712600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr1:196709200-196712600	Weak transcription	Muscle Satellite Cultured Cells	--
30	chr1:196709400-196710200	ZNF genes & repeats	K562	blood
31	chr1:196709400-196711200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr1:196709400-196716800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr1:196709400-196716800	Weak transcription	Fetal Muscle Trunk	muscle
34	chr1:196709400-196718000	Weak transcription	Duodenum Mucosa	Duodenum
35	chr1:196709600-196710200	Weak transcription	Dnd41	blood
36	chr1:196710200-196711200	Strong transcription	Dnd41	blood
37	chr1:196710200-196711800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr1:196710200-196712000	Weak transcription	K562	blood
39	chr1:196710600-196718200	Weak transcription	HSMM	muscle
40	chr1:196711200-196711600	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr1:196711200-196714600	Weak transcription	Dnd41	blood
42	chr1:196711400-196717800	Weak transcription	Fetal Muscle Leg	muscle
43	chr1:196711400-196719800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr1:196711600-196717200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
45	chr1:196711600-196718000	Weak transcription	Ovary	ovary
46	chr1:196711800-196713400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr1:196712600-196712800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr1:196712600-196712800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr1:196712600-196712800	Enhancers	Muscle Satellite Cultured Cells	--
50	chr1:196712800-196718400	Weak transcription	Muscle Satellite Cultured Cells	--

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