Variant report

Variant	nsv1015591
Chromosome Location	chr7:149561049-149726806
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1710)
CpG islands
(count:2260)
Chromatin interactive
region (count:34)
LncRNA
region (count:32)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:1710 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:149569917-149570279	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:149570724-149570796	K562	blood:	n/a	n/a
3	ARID3A	chr7:149582723-149583399	HepG2	liver:	n/a	n/a
4	ATF1	chr7:149700297-149700734	K562	blood:	n/a	n/a
5	ATF2	chr7:149580488-149580895	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr7:149582481-149582971	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr7:149570787-149571275	A549	lung:	n/a	n/a
8	ATF3	chr7:149569772-149570122	K562	blood:	n/a	n/a
9	ATF3	chr7:149570878-149571254	K562	blood:	n/a	n/a
10	ATF3	chr7:149570786-149571273	A549	lung:	n/a	n/a
11	BACH1	chr7:149580465-149580839	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr7:149570614-149570991	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr7:149570143-149571239	K562	blood:	n/a	n/a
14	BACH1	chr7:149672891-149673080	H1-hESC	embryonic stem cell:	n/a	n/a
15	BATF	chr7:149618320-149618563	GM12878	blood:	n/a	n/a
16	BATF	chr7:149568758-149569093	GM12878	blood:	n/a	n/a
17	BATF	chr7:149568705-149569074	GM12878	blood:	n/a	n/a
18	BCL3	chr7:149630950-149631218	GM12878	blood:	n/a	n/a
19	BCL3	chr7:149631103-149631404	GM12878	blood:	n/a	n/a
20	BHLHE40	chr7:149570710-149572354	HepG2	liver:	n/a	n/a
21	BHLHE40	chr7:149569494-149571562	K562	blood:	n/a	n/a
22	BHLHE40	chr7:149569534-149570143	HepG2	liver:	n/a	n/a
23	BHLHE40	chr7:149567871-149567960	K562	blood:	n/a	n/a
24	BHLHE40	chr7:149570284-149570668	GM12878	blood:	n/a	n/a
25	BHLHE40	chr7:149570982-149571281	GM12878	blood:	n/a	n/a
26	BHLHE40	chr7:149580418-149581011	K562	blood:	n/a	n/a
27	BRCA1	chr7:149570995-149571386	GM12878	blood:	n/a	n/a
28	BRCA1	chr7:149581295-149581426	HepG2	liver:	n/a	n/a
29	BRCA1	chr7:149569691-149570033	HepG2	liver:	n/a	n/a
30	BRCA1	chr7:149571926-149572401	HepG2	liver:	n/a	n/a
31	BRCA1	chr7:149571389-149571516	HepG2	liver:	n/a	n/a
32	BRCA1	chr7:149561921-149562021	HepG2	liver:	n/a	n/a
33	CBX3	chr7:149569402-149571354	K562	blood:	n/a	n/a
34	CBX3	chr7:149569381-149570140	K562	blood:	n/a	n/a
35	CCNT2	chr7:149565719-149565772	K562	blood:	n/a	n/a
36	CCNT2	chr7:149570061-149571478	K562	blood:	n/a	n/a
37	CEBPB	chr7:149571848-149572136	HepG2	liver:	n/a	n/a
38	CEBPB	chr7:149600657-149600793	K562	blood:	n/a	chr7:149600686-149600697
39	CEBPB	chr7:149569947-149570077	HepG2	liver:	n/a	n/a
40	CEBPB	chr7:149569513-149570337	K562	blood:	n/a	n/a
41	CEBPB	chr7:149615029-149615227	HepG2	liver:	n/a	chr7:149615084-149615093 chr7:149615082-149615095 chr7:149615084-149615093 chr7:149615084-149615093 chr7:149615083-149615094 chr7:149615084-149615093 chr7:149615082-149615095 chr7:149615082-149615093
42	CEBPB	chr7:149572398-149572529	K562	blood:	n/a	chr7:149572404-149572417
43	CEBPB	chr7:149600641-149600848	A549	lung:	n/a	chr7:149600686-149600697
44	CEBPB	chr7:149569857-149570560	H1-hESC	embryonic stem cell:	n/a	n/a
45	CEBPB	chr7:149581488-149581752	HepG2	liver:	n/a	chr7:149581616-149581627
46	CEBPB	chr7:149667610-149667796	K562	blood:	n/a	chr7:149667743-149667754
47	CEBPB	chr7:149667622-149667822	IMR90	lung:	n/a	chr7:149667743-149667754
48	CEBPB	chr7:149564427-149564666	HepG2	liver:	n/a	n/a
49	CEBPB	chr7:149684112-149684277	K562	blood:	n/a	chr7:149684215-149684232
50	CEBPB	chr7:149667593-149667795	HepG2	liver:	n/a	chr7:149667743-149667754

(count:2260 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:149570128-149570178	HCM	heart:	n/a
2	chr7:149571017-149571067	PrEC	prostate:	n/a
3	chr7:149570163-149570213	HL-60	blood:	n/a
4	chr7:149570128-149570178	HCM	heart:	n/a
5	chr7:149571017-149571067	PrEC	prostate:	n/a
6	chr7:149570163-149570213	HL-60	blood:	n/a
7	chr7:149577256-149577306	GM06990	blood:	n/a
8	chr7:149570036-149570086	SK-N-SH_RA	brain:	n/a
9	chr7:149571373-149571423	HCM	heart:	n/a
10	chr7:149570183-149570233	Hepatocyte	liver:	n/a
11	chr7:149570992-149571042	HEEpiC	esophagus:	n/a
12	chr7:149570931-149570981	U87	brain:	n/a
13	chr7:149571111-149571161	SKMC	muscle:	n/a
14	chr7:149569715-149569765	SK-N-SH	brain:	n/a
15	chr7:149567078-149567128	HPAEpiC	pulmonary alveolar:	n/a
16	chr7:149571256-149571306	BE2_C	brain:	n/a
17	chr7:149571094-149571144	SK-N-MC	brain:	n/a
18	chr7:149571256-149571306	AG04449	skin:	fetal
19	chr7:149575067-149575117	NH-A	brain:	n/a
20	chr7:149570989-149571039	BE2_C	brain:	n/a
21	chr7:149570071-149570121	HEK293	kidney:	embryo
22	chr7:149580879-149580929	Caco-2	colon:	n/a
23	chr7:149570036-149570086	GM12891	blood:	n/a
24	chr7:149570367-149570417	Hela-S3	cervix:	n/a
25	chr7:149571107-149571157	AoSMC	blood vessel:	n/a
26	chr7:149571094-149571144	Hela-S3	cervix:	n/a
27	chr7:149571146-149571196	T-47D	breast:	n/a
28	chr7:149562623-149562673	SK-N-SH_RA	brain:	n/a
29	chr7:149569998-149570048	AG04449	skin:	fetal
30	chr7:149570183-149570233	MCF-7	breast:	n/a
31	chr7:149582572-149582622	HCPEpiC	choroid plexus:	n/a
32	chr7:149642580-149642630	HepG2	liver:	n/a
33	chr7:149575067-149575117	NHBE	bronchial:	n/a
34	chr7:149570071-149570121	A549	lung:	n/a
35	chr7:149568525-149568575	MCF-7	breast:	n/a
36	chr7:149570071-149570121	HepG2	liver:	n/a
37	chr7:149570931-149570981	AG09319	gingival:	n/a
38	chr7:149571146-149571196	SKMC	muscle:	n/a
39	chr7:149570071-149570121	HRPEpiC	eye:	n/a
40	chr7:149562623-149562673	T-47D	breast:	n/a
41	chr7:149578441-149578491	AG10803	skin:	n/a
42	chr7:149571111-149571161	HMEC	breast:	n/a
43	chr7:149570163-149570213	PFSK-1	brain:	n/a
44	chr7:149570367-149570417	HPAEpiC	pulmonary alveolar:	n/a
45	chr7:149569776-149569826	Hela-S3	cervix:	n/a
46	chr7:149570163-149570213	HepG2	liver:	n/a
47	chr7:149571107-149571157	HL-60	blood:	n/a
48	chr7:149580879-149580929	GM12878	blood:	n/a
49	chr7:149570987-149571037	HUVEC	blood vessel:	n/a
50	chr7:149570036-149570086	IMR90	lung:	fetal

(count:34 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:149570793..149573386-chr7:149577095..149580560,3	K562	blood:
2	chr7:149580491..149582159-chr7:149582592..149584410,2	MCF-7	breast:
3	chr7:149570115..149571658-chr7:149574660..149576811,2	MCF-7	breast:
4	chr7:149561762..149564667-chr7:149569183..149572180,2	MCF-7	breast:
5	chr7:149549543..149551998-chr7:149562107..149563696,2	MCF-7	breast:
6	chr7:149573433..149575641-chr7:149575781..149577952,2	K562	blood:
7	chr7:149561961..149563986-chr7:149564206..149566986,2	MCF-7	breast:
8	chr7:149552958..149556692-chr7:149569431..149572325,5	MCF-7	breast:
9	chr7:149543572..149545726-chr7:149561938..149563805,2	K562	blood:
10	chr7:149565876..149568768-chr7:149569299..149572526,4	MCF-7	breast:
11	chr7:149570103..149572096-chr7:150064199..150066897,3	MCF-7	breast:
12	chr7:149534869..149537140-chr7:149569608..149571872,2	MCF-7	breast:
13	chr7:149470006..149471576-chr7:149569800..149572611,2	MCF-7	breast:
14	chr7:149561896..149564706-chr7:149568478..149571316,3	MCF-7	breast:
15	chr7:149558310..149561559-chr7:149563222..149566237,4	K562	blood:
16	chr7:149570793..149573386-chr7:149577095..149580560,3	K562	blood:
17	chr7:149639335..149639849-chr7:153850966..153851836,2	MCF-7	breast:
18	chr7:149569895..149574234-chr7:149575186..149579607,5	K562	blood:
19	chr7:149559447..149562113-chr7:149563589..149565249,2	MCF-7	breast:
20	chr7:149484191..149484692-chr7:149580431..149580931,2	K562	blood:
21	chr7:149699024..149700856-chr7:153788710..153791500,2	K562	blood:
22	chr7:149580491..149582159-chr7:149582592..149584410,2	MCF-7	breast:
23	chr7:149555292..149556813-chr7:149559703..149561551,2	K562	blood:
24	chr7:149580322..149580844-chr7:149745955..149746566,2	MCF-7	breast:
25	chr17:7742656..7744593-chr7:149569893..149571765,2	MCF-7	breast:
26	chr7:149535200..149537036-chr7:149565230..149566898,2	MCF-7	breast:
27	chr7:149569895..149574234-chr7:149575186..149579607,5	K562	blood:
28	chr7:149541998..149544901-chr7:149565491..149567643,2	MCF-7	breast:
29	chr7:149570954..149573807-chr7:150065336..150068583,3	MCF-7	breast:
30	chr7:149320936..149323357-chr7:149569430..149571790,2	K562	blood:
31	chr7:149545860..149548603-chr7:149560677..149562213,2	MCF-7	breast:
32	chr7:149501055..149503338-chr7:149561332..149564151,2	MCF-7	breast:
33	chr7:149534427..149538606-chr7:149567610..149571411,8	MCF-7	breast:
34	chr7:149561961..149563986-chr7:149564206..149566986,2	MCF-7	breast:

(count:32 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF862-2	chr7:149576425-149576454	NONHSAT124076
2	lnc-ZNF862-2	chr7:149572687-149572734	NONHSAT124078
3	lnc-ZNF467-1	chr7:149568731-149568885	ENSG00000204934
4	lnc-ZNF467-3	chr7:149607852-149608064	expReg_chr7_11327_-
5	lnc-ATP6V0E2-8	chr7:149697081-149697368	expReg_chr7_12098_+
6	lnc-ZNF467-1	chr7:149564783-149566947	NONHSAT124073
7	lnc-ATP6V0E2-7	chr7:149670980-149671663	l_3505_chr7:149670979-149676122_ovary
8	lnc-ZNF862-2	chr7:149571893-149572024	NONHSAT124078
9	lnc-ZNF467-1	chr7:149564786-149566947	ENSG00000204934
10	lnc-ZNF467-1	chr7:149567387-149567440	ENSG00000204934
11	lnc-ATP6V0E2-7	chr7:149676088-149676122	l_3505_chr7:149670979-149676122_ovary
12	lnc-ZNF467-1	chr7:149567331-149567440	ENSG00000204934
13	lnc-ZNF862-2	chr7:149576424-149576631	NONHSAT124078
14	lnc-ATP6V0E2-1	chr7:149697841-149700167	ENSG00000249583
15	lnc-ZNF467-1	chr7:149570313-149570931	ENSG00000204934
16	lnc-ATP6V0E2-4	chr7:149587828-149588505	ENSG00000273011.1
17	lnc-ZNF467-1	chr7:149568731-149568885	ENSG00000204934
18	lnc-ZNF467-4	chr7:149699986-149700449	NONHSAT124086
19	lnc-ATP6V0E2-1	chr7:149701497-149702213	ENSG00000249583
20	lnc-ZNF467-1	chr7:149578448-149578669	ENSG00000273293.1
21	lnc-ZNF862-2	chr7:149575767-149575879	NONHSAT124078
22	lnc-ZNF467-1	chr7:149567331-149567440	NONHSAT124073
23	lnc-ZNF467-1	chr7:149570313-149570934	ENSG00000204934
24	lnc-ZNF467-1	chr7:149577458-149577699	ENSG00000204934
25	lnc-ZNF467-1	chr7:149564861-149566947	ENSG00000204934
26	lnc-ZNF467-1	chr7:149570313-149570951	NONHSAT124073
27	lnc-ATP6V0E2-3	chr7:149578553-149579199	NONHSAT124082
28	lnc-ZNF862-2	chr7:149572688-149572734	NONHSAT124076
29	lnc-ZNF467-1	chr7:149568731-149568885	NONHSAT124073
30	lnc-ZNF862-2	chr7:149571077-149571258	NONHSAT124076
31	lnc-ZNF467-1	chr7:149568731-149568885	ENSG00000204934
32	lnc-ZNF467-4	chr7:149700614-149701513	NONHSAT124086

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ZNF862	hsa-miR-335-5p	chr7:149562373-149562396

Variant related genes	Relation type
ENSG00000273293	TF binding region
ENSG00000224016	TF binding region
ATP6V0E2-AS1	TF binding region
ENSG00000273011	TF binding region
ATP6V0E2	TF binding region
ENSG00000273419	TF binding region
ENSG00000260555	TF binding region
ENSG00000273293	CpG island
ENSG00000224016	CpG island
ATP6V0E2-AS1	CpG island
ENSG00000273011	CpG island
ATP6V0E2	CpG island
ENSG00000273419	CpG island
ENSG00000260555	CpG island
ENSG00000181444	chromatin interactions
ENSG00000196456	chromatin interactions
ENSG00000171130	chromatin interactions
ENSG00000273293	chromatin interactions
ENSG00000133624	chromatin interactions
ENSG00000214022	chromatin interactions
ENSG00000204934	chromatin interactions
ENSG00000132510	chromatin interactions
ENSG00000273419	chromatin interactions
ENSG00000106479	chromatin interactions
HMGA2	miRNA target sites
JPH1	miRNA target sites
SLC26A4	miRNA target sites
HAUS8	miRNA target sites
CCDC47	miRNA target sites
PRR5L	miRNA target sites
RNF219	miRNA target sites
UBE2W	miRNA target sites
SOCS2	miRNA target sites
TAF5	miRNA target sites
MYO9A	miRNA target sites
SMARCC1	miRNA target sites

Extended variants
information (count: 4205 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:4205 , 50 per page) page: 1 2 3 4 5 6 7 ... 85

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3857764	chr7:149561049-149561050	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs542144063	chr7:149561070-149561071	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs552692599	chr7:149561086-149561087	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs182158919	chr7:149561132-149561133	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs527419581	chr7:149561150-149561151	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs186567620	chr7:149561151-149561152	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs371251190	chr7:149561166-149561167	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs117521842	chr7:149561193-149561194	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs377282051	chr7:149561225-149561226	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs376620822	chr7:149561233-149561234	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs368946710	chr7:149561249-149561250	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs34506689	chr7:149561281-149561282	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs139787517	chr7:149561289-149561290	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs200892153	chr7:149561293-149561294	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs200279200	chr7:149561304-149561305	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs62621237	chr7:149561323-149561324	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs373282161	chr7:149561337-149561338	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs557160711	chr7:149561340-149561341	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs531777300	chr7:149561354-149561355	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs377468102	chr7:149561375-149561376	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs549042972	chr7:149561411-149561412	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs371127309	chr7:149561415-149561416	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs548885297	chr7:149561442-149561443	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs568613038	chr7:149561447-149561448	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs560796211	chr7:149561484-149561485	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs575406810	chr7:149561508-149561509	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs533791860	chr7:149561536-149561537	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs116851793	chr7:149561548-149561549	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs570460744	chr7:149561579-149561580	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs539569839	chr7:149561600-149561601	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs80095241	chr7:149561754-149561755	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs398095466	chr7:149561755-149561756	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs189840261	chr7:149561761-149561762	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs35971898	chr7:149561811-149561812	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs558950867	chr7:149561826-149561827	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs573157454	chr7:149561827-149561828	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs115413635	chr7:149561833-149561834	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs555640316	chr7:149561879-149561880	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs143864489	chr7:149561894-149561895	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs148622600	chr7:149561895-149561896	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs142113112	chr7:149561903-149561904	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs532353784	chr7:149562011-149562012	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs559766439	chr7:149562026-149562027	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs529663312	chr7:149562045-149562046	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs116121346	chr7:149562057-149562058	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs112994247	chr7:149562058-149562059	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs531935736	chr7:149562059-149562060	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs10278433	chr7:149562079-149562080	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs79347594	chr7:149562084-149562085	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs182398648	chr7:149562091-149562092	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Papillary thyroid carcinoma	21436994	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Hodgkin''s lymphoma	18179710	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	17603634	CNVD
Urothelial carcinoma	18382360	CNVD
Myelodysplastic syndrome	17634407	CNVD
Multiple myeloma	16461302	CNVD
Neuroblastoma	18923191	CNVD
Schizophrenia	17646849	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	16864856	CNVD
Autism	20808228	CNVD
Breast cancer	21509527	CNVD
Ovarian cancer	21720365	CNVD
Heart disease	21282601	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Glioblastoma multiforme	17002787	CNVD
Lobular carcinoma	20920651	CNVD
Long-qt syndrome	20920651	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Liver carcinoma	19366792	CNVD
Long-qt syndrome	17576883	CNVD
Bradycardia syndrome	17576883	CNVD
Sudden cardiac death	19188705	CNVD
renal disease	17924346	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:1604 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:149540000-149569600	Weak transcription	Psoas Muscle	Psoas
2	chr7:149542600-149561800	Weak transcription	Primary hematopoietic stem cells	blood
3	chr7:149543000-149569600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr7:149552200-149569400	Weak transcription	Fetal Kidney	kidney
5	chr7:149552800-149561400	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr7:149552800-149564800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
7	chr7:149552800-149569600	Weak transcription	NHDF-Ad	bronchial
8	chr7:149552800-149569800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr7:149553000-149567400	Weak transcription	NHLF	lung
10	chr7:149553000-149567800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr7:149553000-149568800	Weak transcription	HSMMtube	muscle
12	chr7:149553200-149564200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr7:149553200-149569600	Weak transcription	HSMM	muscle
14	chr7:149553200-149569800	Weak transcription	Right Atrium	heart
15	chr7:149553400-149569800	Weak transcription	Small Intestine	intestine
16	chr7:149553600-149564000	Strong transcription	Aorta	Aorta
17	chr7:149554000-149563400	Weak transcription	Fetal Heart	heart
18	chr7:149554600-149562600	Genic enhancers	Fetal Thymus	thymus
19	chr7:149554800-149561200	Strong transcription	Primary B cells from cord blood	blood
20	chr7:149554800-149563200	Strong transcription	Placenta	Placenta
21	chr7:149554800-149565400	Strong transcription	Brain Anterior Caudate	brain
22	chr7:149555000-149563200	Strong transcription	Fetal Stomach	stomach
23	chr7:149555000-149565200	Strong transcription	Fetal Muscle Leg	muscle
24	chr7:149555200-149562600	Strong transcription	Rectal Mucosa Donor 29	rectum
25	chr7:149555600-149562600	Strong transcription	Fetal Muscle Trunk	muscle
26	chr7:149555600-149564000	Strong transcription	Brain Cingulate Gyrus	brain
27	chr7:149555600-149564000	Strong transcription	Skeletal Muscle Female	skeletal muscle
28	chr7:149555600-149565000	Strong transcription	Stomach Smooth Muscle	stomach
29	chr7:149555800-149562600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
30	chr7:149555800-149566600	Strong transcription	Fetal Intestine Small	intestine
31	chr7:149556000-149568800	Strong transcription	Brain Inferior Temporal Lobe	brain
32	chr7:149556200-149561200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
33	chr7:149556200-149563400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr7:149556200-149563600	Strong transcription	Esophagus	oesophagus
35	chr7:149556200-149565200	Strong transcription	Brain Hippocampus Middle	brain
36	chr7:149556200-149565600	Strong transcription	Skeletal Muscle Male	skeletal muscle
37	chr7:149556400-149561400	Strong transcription	Spleen	Spleen
38	chr7:149556400-149562200	Strong transcription	Primary neutrophils fromperipheralblood	blood
39	chr7:149556400-149562200	Strong transcription	Cortex derived primary cultured neurospheres	brain
40	chr7:149556400-149562400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr7:149556400-149562400	Strong transcription	Left Ventricle	heart
42	chr7:149556400-149562800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr7:149556400-149562800	Strong transcription	Liver	Liver
44	chr7:149556400-149563000	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr7:149556400-149563600	Strong transcription	Gastric	stomach
46	chr7:149556400-149563800	Strong transcription	Brain Germinal Matrix	brain
47	chr7:149556400-149564000	Strong transcription	Fetal Intestine Large	intestine
48	chr7:149556400-149564200	Strong transcription	Adipose Nuclei	Adipose
49	chr7:149556400-149564400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr7:149556400-149564400	Strong transcription	Brain Angular Gyrus	brain

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