Variant report
Variant | nsv1016037 |
---|---|
Chromosome Location | chr9:22703983-22929532 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:419)
- CpG islands (count:61)
- Chromatin interactive region (count:6)
- LncRNA region (count:22)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BACH1 | chr9:22856119-22856335 | H1-hESC | embryonic stem cell: | n/a | n/a |
2 | BATF | chr9:22922274-22922624 | GM12878 | blood: | n/a | n/a |
3 | BATF | chr9:22922324-22922554 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr9:22913650-22913872 | GM12878 | blood: | n/a | n/a |
5 | BCL3 | chr9:22913627-22913874 | GM12878 | blood: | n/a | n/a |
6 | BCLAF1 | chr9:22913614-22913896 | GM12878 | blood: | n/a | n/a |
7 | BHLHE40 | chr9:22912811-22913992 | GM12878 | blood: | n/a | n/a |
8 | BHLHE40 | chr9:22917384-22917393 | GM12878 | blood: | n/a | n/a |
9 | BHLHE40 | chr9:22922390-22922656 | GM12878 | blood: | n/a | n/a |
10 | BHLHE40 | chr9:22813725-22813875 | GM12878 | blood: | n/a | n/a |
11 | CEBPB | chr9:22822556-22822741 | IMR90 | lung: | n/a | n/a |
12 | CEBPB | chr9:22879790-22879953 | IMR90 | lung: | n/a | n/a |
13 | CEBPB | chr9:22776252-22776563 | IMR90 | lung: | n/a | chr9:22776409-22776418 chr9:22776407-22776418 |
14 | CEBPB | chr9:22709485-22709771 | HepG2 | liver: | n/a | n/a |
15 | CEBPB | chr9:22799083-22799268 | A549 | lung: | n/a | n/a |
16 | CEBPB | chr9:22845556-22845648 | IMR90 | lung: | n/a | n/a |
17 | CEBPB | chr9:22709428-22709726 | IMR90 | lung: | n/a | n/a |
18 | CEBPB | chr9:22845462-22845705 | H1-hESC | embryonic stem cell: | n/a | n/a |
19 | CEBPB | chr9:22709513-22709726 | A549 | lung: | n/a | n/a |
20 | CEBPB | chr9:22919666-22919977 | HepG2 | liver: | n/a | chr9:22919814-22919823 chr9:22919812-22919825 chr9:22919814-22919825 chr9:22919814-22919823 chr9:22919814-22919823 chr9:22919814-22919823 chr9:22919812-22919823 chr9:22919812-22919825 |
21 | CEBPB | chr9:22776317-22776520 | A549 | lung: | n/a | chr9:22776409-22776418 chr9:22776407-22776418 |
22 | CEBPB | chr9:22879815-22879982 | A549 | lung: | n/a | n/a |
23 | CEBPB | chr9:22776272-22776557 | HepG2 | liver: | n/a | chr9:22776409-22776418 chr9:22776407-22776418 |
24 | CEBPB | chr9:22776328-22776436 | H1-hESC | embryonic stem cell: | n/a | chr9:22776409-22776418 chr9:22776407-22776418 |
25 | CEBPB | chr9:22817159-22817473 | IMR90 | lung: | n/a | n/a |
26 | CEBPB | chr9:22905045-22905254 | HepG2 | liver: | n/a | n/a |
27 | CEBPB | chr9:22919664-22919977 | A549 | lung: | n/a | chr9:22919814-22919823 chr9:22919812-22919825 chr9:22919814-22919825 chr9:22919814-22919823 chr9:22919814-22919823 chr9:22919814-22919823 chr9:22919812-22919823 chr9:22919812-22919825 |
28 | CEBPB | chr9:22810946-22811142 | IMR90 | lung: | n/a | chr9:22811049-22811062 chr9:22811049-22811062 chr9:22811050-22811061 chr9:22811049-22811062 chr9:22811049-22811060 |
29 | CEBPB | chr9:22810956-22811124 | HepG2 | liver: | n/a | chr9:22811049-22811062 chr9:22811049-22811062 chr9:22811050-22811061 chr9:22811049-22811062 chr9:22811049-22811060 |
30 | CEBPB | chr9:22766124-22766157 | H1-hESC | embryonic stem cell: | n/a | n/a |
31 | CHD1 | chr9:22912511-22912523 | GM12878 | blood: | n/a | n/a |
32 | CHD1 | chr9:22913648-22913842 | GM12878 | blood: | n/a | n/a |
33 | CHD2 | chr9:22913431-22913982 | GM12878 | blood: | n/a | n/a |
34 | CHD2 | chr9:22813671-22813837 | GM12878 | blood: | n/a | n/a |
35 | CHD2 | chr9:22922062-22922259 | GM12878 | blood: | n/a | n/a |
36 | CTCF | chr9:22813660-22813810 | HRPEpiC | eye: | n/a | chr9:22813711-22813729 |
37 | CTCF | chr9:22719040-22719190 | HA-sp | spinal cord: | n/a | n/a |
38 | CTCF | chr9:22717240-22717390 | MCF-7 | breast: | n/a | n/a |
39 | CTCF | chr9:22717340-22717490 | HRE | kidney: | n/a | n/a |
40 | CTCF | chr9:22813760-22813910 | NHLF | lung: | n/a | n/a |
41 | CTCF | chr9:22718720-22718870 | HRPEpiC | eye: | n/a | chr9:22718838-22718854 chr9:22718837-22718855 |
42 | CTCF | chr9:22813683-22813765 | Kidney_OC | kidney: | n/a | chr9:22813711-22813729 |
43 | CTCF | chr9:22717240-22717390 | NHDF-neo | bronchial: | n/a | n/a |
44 | CTCF | chr9:22813620-22813770 | HEEpiC | esophagus: | n/a | chr9:22813711-22813729 |
45 | CTCF | chr9:22717220-22717370 | HMF | breast: | n/a | n/a |
46 | CTCF | chr9:22813640-22813790 | AG04450 | lung: | n/a | chr9:22813711-22813729 |
47 | CTCF | chr9:22813600-22813750 | AoAF | blood vessel: | n/a | chr9:22813711-22813729 |
48 | CTCF | chr9:22813760-22813910 | BE2_C | brain: | n/a | n/a |
49 | CTCF | chr9:22717341-22717424 | MCF-7 | breast: | n/a | n/a |
50 | CTCF | chr9:22813620-22813770 | GM12865 | blood: | n/a | chr9:22813711-22813729 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr9:22863277-22863327 | T-47D | breast: | n/a |
2 | chr9:22863277-22863327 | NHBE | bronchial: | n/a |
3 | chr9:22863277-22863327 | SK-N-MC | brain: | n/a |
4 | chr9:22863277-22863327 | GM12892 | blood: | n/a |
5 | chr9:22863277-22863327 | GM19239 | blood: | n/a |
6 | chr9:22863277-22863327 | HNPCEpiC | eye: | n/a |
7 | chr9:22863277-22863327 | SK-N-SH | brain: | n/a |
8 | chr9:22863277-22863327 | K562 | blood: | n/a |
9 | chr9:22863277-22863327 | SK-N-SH_RA | brain: | n/a |
10 | chr9:22863277-22863327 | HCM | heart: | n/a |
11 | chr9:22863277-22863327 | HAEpiC | amniotic membrane: | n/a |
12 | chr9:22863277-22863327 | BJ | skin: | n/a |
13 | chr9:22863277-22863327 | Hela-S3 | cervix: | n/a |
14 | chr9:22863277-22863327 | H1-hESC | embryonic stem cell: | embryo |
15 | chr9:22863277-22863327 | LNCaP | prostate: | n/a |
16 | chr9:22863277-22863327 | AG09319 | gingival: | n/a |
17 | chr9:22863277-22863327 | Caco-2 | colon: | n/a |
18 | chr9:22863277-22863327 | ovcar-3 | ovarian: | n/a |
19 | chr9:22863277-22863327 | NB4 | blood: | n/a |
20 | chr9:22863277-22863327 | MCF-7 | breast: | n/a |
21 | chr9:22863277-22863327 | HepG2 | liver: | n/a |
22 | chr9:22863277-22863327 | PANC-1 | pancreas: | n/a |
23 | chr9:22863277-22863327 | HCF | heart: | n/a |
24 | chr9:22863277-22863327 | BE2_C | brain: | n/a |
25 | chr9:22863277-22863327 | NH-A | brain: | n/a |
26 | chr9:22863277-22863327 | AoSMC | blood vessel: | n/a |
27 | chr9:22863277-22863327 | HEK293 | kidney: | embryo |
28 | chr9:22863277-22863327 | ProgFib | skin: | n/a |
29 | chr9:22863277-22863327 | HIPEpiC | eye: | n/a |
30 | chr9:22863277-22863327 | SKMC | muscle: | n/a |
31 | chr9:22863277-22863327 | HRCEpiC | kidney: | n/a |
32 | chr9:22863277-22863327 | AG04450 | lung: | fetal |
33 | chr9:22863277-22863327 | NT2-D1 | testis: | n/a |
34 | chr9:22863277-22863327 | GM12878 | blood: | n/a |
35 | chr9:22863277-22863327 | MCF10A-Er-Src | breast: | n/a |
36 | chr9:22863277-22863327 | PFSK-1 | brain: | n/a |
37 | chr9:22863277-22863327 | HPAEpiC | pulmonary alveolar: | n/a |
38 | chr9:22863277-22863327 | HRPEpiC | eye: | n/a |
39 | chr9:22863277-22863327 | CMK | blood: | n/a |
40 | chr9:22863277-22863327 | AG10803 | skin: | n/a |
41 | chr9:22863277-22863327 | HCT-116 | colon: | n/a |
42 | chr9:22863277-22863327 | HRE | kidney: | n/a |
43 | chr9:22863277-22863327 | AG09309 | skin: | n/a |
44 | chr9:22863277-22863327 | ECC-1 | luminal epithelium: | n/a |
45 | chr9:22863277-22863327 | PrEC | prostate: | n/a |
46 | chr9:22863277-22863327 | HUVEC | blood vessel: | n/a |
47 | chr9:22863277-22863327 | HL-60 | blood: | n/a |
48 | chr9:22863277-22863327 | Hepatocyte | liver: | n/a |
49 | chr9:22863277-22863327 | A549 | lung: | n/a |
50 | chr9:22863277-22863327 | Jurkat | blood: | n/a |
(count:6 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr15:65596803..65598452-chr9:22707864..22709364,2 | K562 | blood: | |
2 | chr15:65596519..65598485-chr9:22707844..22709364,2 | MCF-7 | breast: | |
3 | chr15:65596780..65597412-chr9:22707344..22708364,4 | MCF-7 | breast: | |
4 | chr8:64119199..64121386-chr9:22867154..22869791,2 | MCF-7 | breast: | |
5 | chr9:22813272..22814142-chr9:23088887..23089663,2 | MCF-7 | breast: | |
6 | chr11:73470070..73470855-chr9:22831107..22832031,2 | MCF-7 | breast: |
(count:22 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-DMRTA1-1 | chr9:22767961-22768315 | ENSG00000224549 |
2 | lnc-DMRTA1-11 | chr9:22716040-22716456 | NONHSAT130445 |
3 | lnc-DMRTA1-1 | chr9:22723308-22723429 | NONHSAT130443 |
4 | lnc-DMRTA1-14 | chr9:22764211-22764434 | NONHSAT130447 |
5 | lnc-DMRTA1-15 | chr9:22847494-22847573 | NONHSAT130451 |
6 | lnc-DMRTA1-1 | chr9:22767106-22768486 | NONHSAT130449 |
7 | lnc-DMRTA1-1 | chr9:22767174-22767265 | ENSG00000224549 |
8 | lnc-DMRTA1-15 | chr9:22842077-22844127 | NONHSAT130451 |
9 | lnc-DMRTA1-2 | chr9:22723308-22723429 | ENSG00000234840.1 |
10 | lnc-DMRTA1-13 | chr9:22757174-22757265 | NONHSAT130448 |
11 | lnc-DMRTA1-2 | chr9:22820737-22821597 | ENSG00000234840.1 |
12 | lnc-DMRTA1-1 | chr9:22767174-22767298 | NONHSAT130443 |
13 | lnc-DMRTA1-2 | chr9:22823251-22824212 | ENSG00000234840.1 |
14 | lnc-DMRTA1-15 | chr9:22840524-22841967 | NONHSAT130451 |
15 | lnc-DMRTA1-13 | chr9:22757961-22758315 | NONHSAT130448 |
16 | lnc-DMRTA1-12 | chr9:22725718-22725880 | NONHSAT130446 |
17 | lnc-DMRTA1-14 | chr9:22754997-22755223 | NONHSAT130447 |
18 | lnc-DMRTA1-12 | chr9:22728286-22728585 | NONHSAT130446 |
19 | lnc-DMRTA1-11 | chr9:22715216-22715757 | NONHSAT130445 |
20 | lnc-DMRTA1-10 | chr9:22713308-22713435 | l_3742_chr9:22664441-22713435_adipose |
21 | lnc-DMRTA1-11 | chr9:22714322-22715083 | NONHSAT130445 |
22 | lnc-DMRTA1-14 | chr9:22759737-22759837 | NONHSAT130447 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000236739 | TF binding region |
ENSG00000224549 | TF binding region |
ENSG00000236739 | CpG island |
ENSG00000224549 | CpG island |
ENSG00000200156 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs533533833 | chr9:22705688-22705689 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs192074700 | chr9:22705699-22705700 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs183197227 | chr9:22705701-22705702 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs553114384 | chr9:22705708-22705709 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs111459094 | chr9:22705712-22705713 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs535170733 | chr9:22705747-22705748 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs555007235 | chr9:22705782-22705783 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs140410195 | chr9:22705784-22705785 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs543779720 | chr9:22705785-22705786 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs142727210 | chr9:22705813-22705814 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs578185738 | chr9:22705834-22705835 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs75687101 | chr9:22705853-22705854 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs560735105 | chr9:22705857-22705858 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs529448404 | chr9:22705860-22705861 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs549506877 | chr9:22705862-22705863 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs575667897 | chr9:22705892-22705893 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs544568574 | chr9:22705927-22705928 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs557872734 | chr9:22705947-22705948 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs200035089 | chr9:22705950-22705951 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs531759473 | chr9:22705951-22705952 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs551715301 | chr9:22705954-22705955 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs570686660 | chr9:22705959-22705960 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs533231554 | chr9:22706032-22706033 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs546522238 | chr9:22706061-22706062 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs566341221 | chr9:22706082-22706083 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs535227963 | chr9:22706094-22706095 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs376654647 | chr9:22706128-22706129 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs113342834 | chr9:22706139-22706140 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs1375290 | chr9:22706144-22706145 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
30 | rs537477637 | chr9:22706151-22706152 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs576220837 | chr9:22706161-22706162 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs112778583 | chr9:22706178-22706179 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs557715474 | chr9:22706179-22706180 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs576715884 | chr9:22706182-22706183 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs139168897 | chr9:22706193-22706194 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs549814868 | chr9:22707344-22707345 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs145771830 | chr9:22707370-22707371 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs534784463 | chr9:22707372-22707373 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs554603301 | chr9:22707379-22707380 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs574494652 | chr9:22707388-22707389 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs377668530 | chr9:22707403-22707404 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs371207667 | chr9:22707419-22707420 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs376296788 | chr9:22707426-22707427 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs138694379 | chr9:22707472-22707473 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs576240546 | chr9:22707474-22707475 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs376612896 | chr9:22707476-22707477 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs142693211 | chr9:22707482-22707483 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs541637557 | chr9:22707502-22707503 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs556166098 | chr9:22707533-22707534 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs367854104 | chr9:22707544-22707545 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Glioblastoma multiforme | 21080181 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Breast cancer | 16608533 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Breast cancer | 16272173 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Breast cancer | 17133270 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Cervical cancer | 21063398 | CNVD |
Retinoblastoma | 22278416 | CNVD |
Splenic marginal zone lymphoma | 18492102 | CNVD |
Melanoma | 18172304 | CNVD |
Biliary cancer | 19435499 | CNVD |
Gastric cancer | 21586687 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Myopathy | 18421352 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Acute lymphoblastic leukemia | 18957548 | CNVD |
Myeloproliferative neoplasm | 17564968 | CNVD |
Malignant meningioma | 17937814 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Glioma | 21971842 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
Cutaneous squamous cell carcinomas | 19131950 | CNVD |
Small bowel adenocarcinoma | 21586687 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Chordoma | 18071362 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Chordoma | 21602918 | CNVD |
Renal cell carcinoma | 18592004 | CNVD |
Developmental delay | 19490664 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
microdeletion syndrome | 16199537 | CNVD |
Non-syndromic sensorineural hearing loss | 21987784 | CNVD |
Cancer | 20164919 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Lung cancer | 18438408 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Breast cancer | 21785460 | CNVD |
Esophageal adenocarcinoma | 19417022 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Autism | 22495311 | CNVD |
Hepatocellular carcinoma | 18803288 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Developmental delay | 21147756 | CNVD |
Pilocytic astrocytoma | 18670637 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Melanoma | 22183965 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Non-small cell lung cancer | 19010865 | CNVD |
Myoepithelioma | 18604193 | CNVD |
Cancer | 22183965 | CNVD |
Glioblastoma multiforme | 21569311 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Ewing''s sarcoma | 22429812 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Glioblastoma multiforme | 19435819 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Glioblastoma multiforme | 22291905 | CNVD |
Lung cancer | 21911935 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
head and neck squamous cell carcinoma | 21798897 | CNVD |
Cancer | 21253487 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Intracranial ependymoma | 16609018 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Glioblastoma multiforme | 21922591 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
T-cell acute lymphoblastic leukemia | 19406988 | CNVD |
Urothelial cell carcinoma | 18451213 | CNVD |
Glioma | 17123091 | CNVD |
Mental retardation | 17124404 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Acute lymphoblastic leukemia | 18768390 | CNVD |
Leukemia | 19602459 | CNVD |
Acute monocytic leukemia | 16498392 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
Leukemia | 18688285 | CNVD |
T-cell acute lymphoblastic leukemia | 18185524 | CNVD |
Acute myeloid leukemia | 19651601 | CNVD |
Coronary Disease | 20032323 | CNVD |
Squamous cell cancer | 20885788 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Cancer | 21732550 | CNVD |
Gastric cancer | 22539939 | CNVD |
Cancer | 21183584 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Diffuse large b-cell lymphoma | 18287131 | CNVD |
Metastatic melanoma | 18483359 | CNVD |
Non-small cell lung cancer | 20864512 | CNVD |
Cervical cancer | 21062161 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Glioblastoma | 17090523 | CNVD |
Lung cancer | 16773561 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Bladder cancer | 19088036 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Melanoma | 16977458 | CNVD |
Glioblastoma multiforme | 17369134 | CNVD |
Chagasic megaesophagus | 20163722 | CNVD |
Melanoma | 19566914 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Hodgkin''s lymphoma | 18179710 | CNVD |
Glioma | 20126413 | CNVD |
Melanoma | 17363583 | CNVD |
Glioblastoma multiforme | 19115005 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Adenoid cystic carcinoma | 18332873 | CNVD |
Cancer | 20581869 | CNVD |
Oral cancer | 22144094 | CNVD |
Barrett''s syndrome | 19417022 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Oral cancer | 21386901 | CNVD |
Breast cancer | 21364760 | CNVD |
Acute myeloid leukemia | 17237825 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Breast cancer | 21858162 | CNVD |
Glioblastoma multiforme | 21525872 | CNVD |
Autism | 20858261 | CNVD |
Epilepsy | 20858261 | CNVD |
Mental retardation | 20858261 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Non-small cell lung cancer | 16651412 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr9:22705600-22706200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
2 | chr9:22712800-22713200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
3 | chr9:22716800-22717600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
4 | chr9:22721000-22722600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
5 | chr9:22722000-22722800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
6 | chr9:22722200-22724200 | Enhancers | Muscle Satellite Cultured Cells | -- |
7 | chr9:22722400-22723000 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
8 | chr9:22722600-22722800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
9 | chr9:22722800-22723800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
10 | chr9:22722800-22724000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
11 | chr9:22723000-22724000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
12 | chr9:22723800-22725800 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
13 | chr9:22724000-22724200 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
14 | chr9:22724000-22724800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
15 | chr9:22724800-22725400 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
16 | chr9:22725400-22725800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
17 | chr9:22725800-22739800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
18 | chr9:22725800-22801600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
19 | chr9:22731200-22732200 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
20 | chr9:22731600-22732000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
21 | chr9:22738800-22778800 | Weak transcription | Liver | Liver |
22 | chr9:22739800-22740200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
23 | chr9:22739800-22740600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
24 | chr9:22740600-22742600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
25 | chr9:22742600-22742800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
26 | chr9:22749200-22749400 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
27 | chr9:22755000-22755400 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
28 | chr9:22763800-22803600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
29 | chr9:22767600-22770200 | Weak transcription | Adipose Nuclei | Adipose |
30 | chr9:22770400-22770800 | Enhancers | Fetal Brain Male | brain |
31 | chr9:22770600-22771000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
32 | chr9:22770800-22771000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
33 | chr9:22770800-22771200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
34 | chr9:22771000-22773400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
35 | chr9:22771200-22773200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
36 | chr9:22772800-22773000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
37 | chr9:22773000-22774200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
38 | chr9:22773200-22774200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
39 | chr9:22773400-22774200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
40 | chr9:22773400-22774400 | Enhancers | HUES48 Cell Line | embryonic stem cell |
41 | chr9:22773600-22774200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
42 | chr9:22773800-22774200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
43 | chr9:22791800-22792600 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
44 | chr9:22792200-22792600 | Enhancers | HUES64 Cell Line | embryonic stem cell |
45 | chr9:22792200-22792600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
46 | chr9:22792200-22792800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
47 | chr9:22792200-22793400 | Enhancers | HUES48 Cell Line | embryonic stem cell |
48 | chr9:22794400-22794600 | Bivalent Enhancer | Left Ventricle | heart |
49 | chr9:22797600-22803800 | Weak transcription | Liver | Liver |
50 | chr9:22803600-22805000 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |