Variant report
| Variant | nsv1017006 |
|---|---|
| Chromosome Location | chr5:179064433-179086482 |
| allele | n/a |
| Outlinks | Ensembl   UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:179052200-179085400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr5:179060800-179065200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr5:179061000-179064600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr5:179061200-179064800 | Weak transcription | NHEK | skin |
| 5 | chr5:179061200-179065800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 6 | chr5:179062000-179064600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 7 | chr5:179064600-179064800 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 8 | chr5:179064600-179065000 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 9 | chr5:179064800-179065000 | Enhancers | NHEK | skin |
| 10 | chr5:179064800-179065600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 11 | chr5:179065000-179065800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 12 | chr5:179065000-179066600 | Weak transcription | NHEK | skin |
| 13 | chr5:179065200-179065400 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr5:179065600-179065800 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 15 | chr5:179065800-179066000 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 16 | chr5:179065800-179067000 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 17 | chr5:179065800-179070600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 18 | chr5:179066000-179066400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 19 | chr5:179066400-179066800 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 20 | chr5:179066600-179066800 | Enhancers | NHEK | skin |
| 21 | chr5:179070000-179070600 | Active TSS | Spleen | Spleen |
| 22 | chr5:179070200-179071000 | Bivalent/Poised TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 23 | chr5:179070600-179070800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
| 24 | chr5:179070800-179078000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 25 | chr5:179071800-179072400 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 26 | chr5:179075400-179075800 | Enhancers | Fetal Muscle Leg | muscle |
| 27 | chr5:179075400-179076800 | Enhancers | Fetal Muscle Trunk | muscle |
| 28 | chr5:179076200-179076600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr5:179076200-179076800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr5:179076400-179076600 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 31 | chr5:179078000-179078200 | Flanking Bivalent TSS/Enh | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 32 | chr5:179078000-179078400 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 33 | chr5:179078000-179078400 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
| 34 | chr5:179078200-179078400 | Bivalent/Poised TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 35 | chr5:179078200-179085400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 36 | chr5:179078400-179079600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr5:179078400-179085400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 38 | chr5:179084400-179084600 | Enhancers | Dnd41 | blood |
| 39 | chr5:179084600-179084800 | Flanking Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
| 40 | chr5:179084600-179084800 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 41 | chr5:179084600-179085000 | Flanking Active TSS | Dnd41 | blood |
| 42 | chr5:179084600-179085400 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 43 | chr5:179084600-179085400 | Active TSS | Rectal Mucosa Donor 31 | rectum |
| 44 | chr5:179084600-179085400 | Enhancers | HMEC | breast |
| 45 | chr5:179084600-179085600 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 46 | chr5:179084600-179085600 | Active TSS | Duodenum Mucosa | Duodenum |
| 47 | chr5:179084600-179085600 | Active TSS | Skeletal Muscle Male | skeletal muscle |
| 48 | chr5:179084600-179085600 | Active TSS | HepG2 | liver |
| 49 | chr5:179084600-179086000 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 50 | chr5:179084600-179086200 | Active TSS | Fetal Brain Female | brain |






