Variant report

Variant nsv1017006
Chromosome Location chr5:179064433-179086482
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:358 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:179052200-179085400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr5:179060800-179065200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr5:179061000-179064600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr5:179061200-179064800 Weak transcription NHEK skin
5 chr5:179061200-179065800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr5:179062000-179064600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr5:179064600-179064800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:179064600-179065000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr5:179064800-179065000 Enhancers NHEK skin
10 chr5:179064800-179065600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr5:179065000-179065800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr5:179065000-179066600 Weak transcription NHEK skin
13 chr5:179065200-179065400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr5:179065600-179065800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
15 chr5:179065800-179066000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr5:179065800-179067000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr5:179065800-179070600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr5:179066000-179066400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr5:179066400-179066800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:179066600-179066800 Enhancers NHEK skin
21 chr5:179070000-179070600 Active TSS Spleen Spleen
22 chr5:179070200-179071000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
23 chr5:179070600-179070800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
24 chr5:179070800-179078000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr5:179071800-179072400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:179075400-179075800 Enhancers Fetal Muscle Leg muscle
27 chr5:179075400-179076800 Enhancers Fetal Muscle Trunk muscle
28 chr5:179076200-179076600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr5:179076200-179076800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr5:179076400-179076600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr5:179078000-179078200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
32 chr5:179078000-179078400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr5:179078000-179078400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
34 chr5:179078200-179078400 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
35 chr5:179078200-179085400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:179078400-179079600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr5:179078400-179085400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr5:179084400-179084600 Enhancers Dnd41 blood
39 chr5:179084600-179084800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr5:179084600-179084800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr5:179084600-179085000 Flanking Active TSS Dnd41 blood
42 chr5:179084600-179085400 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr5:179084600-179085400 Active TSS Rectal Mucosa Donor 31 rectum
44 chr5:179084600-179085400 Enhancers HMEC breast
45 chr5:179084600-179085600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr5:179084600-179085600 Active TSS Duodenum Mucosa Duodenum
47 chr5:179084600-179085600 Active TSS Skeletal Muscle Male skeletal muscle
48 chr5:179084600-179085600 Active TSS HepG2 liver
49 chr5:179084600-179086000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr5:179084600-179086200 Active TSS Fetal Brain Female brain

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