Variant report
Variant | nsv1017225 |
---|---|
Chromosome Location | chr8:11877195-12198242 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1763)
- CpG islands (count:2629)
- Chromatin interactive region (count:2)
- LncRNA region (count:24)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr8:12051904-12051921 | HepG2 | liver: | n/a | n/a |
2 | ATF1 | chr8:12051725-12051925 | K562 | blood: | n/a | n/a |
3 | BATF | chr8:12050725-12051189 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr8:12142536-12142891 | GM12878 | blood: | n/a | n/a |
5 | BATF | chr8:11970251-11970426 | GM12878 | blood: | n/a | chr8:11970334-11970345 |
6 | BATF | chr8:12040152-12040516 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr8:11973137-11973394 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr8:12081356-12081721 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr8:12037596-12037795 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr8:11921283-11921507 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr8:12046059-12046358 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr8:12167856-12168080 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr8:11965355-11965780 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr8:12035447-12035785 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr8:11895971-11896326 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr8:12037531-12037813 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr8:12050398-12050714 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr8:12052217-12052442 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr8:12053405-12053605 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr8:11921281-11921530 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr8:12051326-12051536 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr8:12035382-12035742 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr8:12167854-12168103 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr8:11970194-11970485 | GM12878 | blood: | n/a | chr8:11970334-11970345 |
25 | BATF | chr8:12081387-12081678 | GM12878 | blood: | n/a | n/a |
26 | BCL11A | chr8:12050392-12050631 | GM12878 | blood: | n/a | n/a |
27 | BCL11A | chr8:12081474-12081840 | GM12878 | blood: | n/a | n/a |
28 | BCL11A | chr8:11965424-11965597 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr8:12040167-12040485 | GM12878 | blood: | n/a | n/a |
30 | BCL11A | chr8:12050786-12051218 | GM12878 | blood: | n/a | chr8:12050835-12050844 |
31 | BCL11A | chr8:12052220-12052500 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr8:12045911-12046121 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr8:12052892-12053047 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr8:12035473-12035719 | GM12878 | blood: | n/a | chr8:12035653-12035662 |
35 | BCL11A | chr8:12081321-12081725 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr8:12067083-12067426 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr8:11965306-11965766 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr8:12046125-12046374 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr8:12035456-12035792 | GM12878 | blood: | n/a | chr8:12035653-12035662 |
40 | BCL11A | chr8:12070982-12071173 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr8:12040202-12040491 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr8:12050425-12050675 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr8:12050773-12051631 | GM12878 | blood: | n/a | chr8:12050835-12050844 |
44 | BCL11A | chr8:11958839-11959052 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr8:12051317-12051626 | GM12878 | blood: | n/a | n/a |
46 | BCL3 | chr8:11998133-11998417 | GM12878 | blood: | n/a | n/a |
47 | BHLHE40 | chr8:12051774-12052412 | HepG2 | liver: | n/a | n/a |
48 | BHLHE40 | chr8:12081451-12081736 | HepG2 | liver: | n/a | n/a |
49 | BHLHE40 | chr8:12050913-12051162 | HepG2 | liver: | n/a | n/a |
50 | BHLHE40 | chr8:12045980-12046414 | HepG2 | liver: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:11993449-11993499 | RPTEC | kidney: | n/a |
2 | chr8:12052206-12052256 | ovcar-3 | ovarian: | n/a |
3 | chr8:12052206-12052256 | BJ | skin: | n/a |
4 | chr8:11970655-11970705 | H1-hESC | embryonic stem cell: | embryo |
5 | chr8:12034317-12034367 | HEEpiC | esophagus: | n/a |
6 | chr8:12034388-12034438 | AG09319 | gingival: | n/a |
7 | chr8:11993449-11993499 | RPTEC | kidney: | n/a |
8 | chr8:12052206-12052256 | ovcar-3 | ovarian: | n/a |
9 | chr8:12052206-12052256 | BJ | skin: | n/a |
10 | chr8:11970655-11970705 | H1-hESC | embryonic stem cell: | embryo |
11 | chr8:12034317-12034367 | HEEpiC | esophagus: | n/a |
12 | chr8:12034388-12034438 | AG09319 | gingival: | n/a |
13 | chr8:11977206-11977256 | H1-hESC | embryonic stem cell: | embryo |
14 | chr8:12034317-12034367 | U87 | brain: | n/a |
15 | chr8:11986813-11986863 | GM12892 | blood: | n/a |
16 | chr8:12052924-12052974 | HMEC | breast: | n/a |
17 | chr8:12052164-12052214 | NHDF-neo | bronchial: | n/a |
18 | chr8:11996327-11996377 | ovcar-3 | ovarian: | n/a |
19 | chr8:11986864-11986914 | HNPCEpiC | eye: | n/a |
20 | chr8:11947722-11947772 | K562 | blood: | n/a |
21 | chr8:12052206-12052256 | AG09319 | gingival: | n/a |
22 | chr8:11882962-11883012 | HL-60 | blood: | n/a |
23 | chr8:12051240-12051290 | GM19239 | blood: | n/a |
24 | chr8:12027122-12027172 | HCF | heart: | n/a |
25 | chr8:11989285-11989335 | HRE | kidney: | n/a |
26 | chr8:11996937-11996987 | U87 | brain: | n/a |
27 | chr8:11986813-11986863 | HPAEpiC | pulmonary alveolar: | n/a |
28 | chr8:11882897-11882947 | H1-hESC | embryonic stem cell: | embryo |
29 | chr8:11996937-11996987 | HCF | heart: | n/a |
30 | chr8:11989285-11989335 | PFSK-1 | brain: | n/a |
31 | chr8:11991521-11991571 | ovcar-3 | ovarian: | n/a |
32 | chr8:12034317-12034367 | BE2_C | brain: | n/a |
33 | chr8:12052164-12052214 | HUVEC | blood vessel: | n/a |
34 | chr8:12030155-12030205 | HRPEpiC | eye: | n/a |
35 | chr8:11986813-11986863 | MCF10A-Er-Src | breast: | n/a |
36 | chr8:11992857-11992907 | AG10803 | skin: | n/a |
37 | chr8:12051240-12051290 | IMR90 | lung: | fetal |
38 | chr8:11972998-11973048 | HIPEpiC | eye: | n/a |
39 | chr8:11946498-11946548 | Caco-2 | colon: | n/a |
40 | chr8:11996937-11996987 | HCT-116 | colon: | n/a |
41 | chr8:11882962-11883012 | HIPEpiC | eye: | n/a |
42 | chr8:11882897-11882947 | ProgFib | skin: | n/a |
43 | chr8:11995002-11995052 | AoSMC | blood vessel: | n/a |
44 | chr8:12048124-12048174 | PFSK-1 | brain: | n/a |
45 | chr8:11947722-11947772 | SKMC | muscle: | n/a |
46 | chr8:11882962-11883012 | HRPEpiC | eye: | n/a |
47 | chr8:12052206-12052256 | LNCaP | prostate: | n/a |
48 | chr8:12048124-12048174 | GM12892 | blood: | n/a |
49 | chr8:12030155-12030205 | ECC-1 | luminal epithelium: | n/a |
50 | chr8:11989285-11989335 | ECC-1 | luminal epithelium: | n/a |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-ZNF705D-2 | chr8:11998190-11998224 | NONHSAT125119 |
2 | lnc-ZNF705D-2 | chr8:12056213-12056305 | XLOC_006719 |
3 | lnc-ZNF705D-2 | chr8:12052281-12052946 | NONHSAT125127 |
4 | lnc-ZNF705D-2 | chr8:12034891-12035004 | NONHSAT125117 |
5 | lnc-ZNF705D-2 | chr8:12003148-12003209 | NONHSAT125117 |
6 | lnc-ZNF705D-2 | chr8:12002932-12003176 | NONHSAT125119 |
7 | lnc-ZNF705D-2 | chr8:12052320-12052946 | XLOC_006719 |
8 | lnc-ZNF705D-2 | chr8:11973699-11973834 | NONHSAT125117 |
9 | lnc-ZNF705D-2 | chr8:12053532-12053747 | XLOC_006719 |
10 | lnc-ZNF705D-2 | chr8:12059991-12060127 | XLOC_006719 |
11 | lnc-ZNF705D-2 | chr8:12002932-12003055 | NONHSAT125117 |
12 | lnc-ZNF705D-2 | chr8:12053400-12053457 | XLOC_006719 |
13 | lnc-ZNF705D-2 | chr8:12052268-12052946 | XLOC_006719 |
14 | lnc-ZNF705D-2 | chr8:12034324-12034474 | NONHSAT125117 |
15 | lnc-ZNF705D-2 | chr8:12056213-12056305 | XLOC_006719 |
16 | lnc-ZNF705D-2 | chr8:12059991-12060129 | NONHSAT125127 |
17 | lnc-AC130352.1-2 | chr8:12064280-12064606 | ENSG00000215248 |
18 | lnc-USP17L2-2 | chr8:12008404-12008643 | NONHSAT125120 |
19 | lnc-ZNF705D-2 | chr8:12053400-12053747 | NONHSAT125127 |
20 | lnc-USP17L2-1 | chr8:11985367-11986806 | NONHSAT125118 |
21 | lnc-ZNF705D-2 | chr8:11979496-11979559 | NONHSAT125117 |
22 | lnc-ZNF705D-2 | chr8:12056244-12056305 | NONHSAT125127 |
23 | lnc-ZNF705D-2 | chr8:12056832-12056929 | XLOC_006719 |
24 | lnc-ZNF705D-2 | chr8:12053400-12053747 | XLOC_006719 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000254923 | TF binding region |
FAM85A | TF binding region |
DEFB109P3 | TF binding region |
ENPP7P12 | TF binding region |
DEFB108P3 | TF binding region |
ENSG00000233050 | TF binding region |
FAM86B1 | TF binding region |
ENSG00000255098 | TF binding region |
RNA5SP253 | TF binding region |
USP17L7 | TF binding region |
ENSG00000255016 | TF binding region |
RNA5SP254 | TF binding region |
ALG1L11P | TF binding region |
USP17L2 | TF binding region |
DEFB130 | TF binding region |
OR7E160P | TF binding region |
ENSG00000237215 | TF binding region |
FAM90A2P | TF binding region |
ENSG00000254700 | TF binding region |
FAM66D | TF binding region |
ENSG00000266637 | TF binding region |
ZNF705D | TF binding region |
ENSG00000254923 | CpG island |
FAM85A | CpG island |
DEFB109P3 | CpG island |
ENPP7P12 | CpG island |
DEFB108P3 | CpG island |
ENSG00000233050 | CpG island |
FAM86B1 | CpG island |
ENSG00000255098 | CpG island |
RNA5SP253 | CpG island |
USP17L7 | CpG island |
ENSG00000255016 | CpG island |
RNA5SP254 | CpG island |
ALG1L11P | CpG island |
USP17L2 | CpG island |
DEFB130 | CpG island |
OR7E160P | CpG island |
ENSG00000237215 | CpG island |
FAM90A2P | CpG island |
ENSG00000254700 | CpG island |
FAM66D | CpG island |
ENSG00000266637 | CpG island |
ZNF705D | CpG island |
ENSG00000149823 | chromatin interactions |
ZNF597 | miRNA target sites |
C9orf150 | miRNA target sites |
TMEM30B | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs73542355 | chr8:11882401-11882402 | Inactive region | Chromatin interactive region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
2 | rs182024828 | chr8:11882414-11882415 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs549281650 | chr8:11882428-11882429 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs111551761 | chr8:11882437-11882438 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs538242050 | chr8:11882477-11882478 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs188918445 | chr8:11882492-11882493 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs116628510 | chr8:11882508-11882509 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs371045456 | chr8:11882546-11882547 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs539184913 | chr8:11882547-11882548 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs140633812 | chr8:11882549-11882550 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs144483795 | chr8:11882560-11882561 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs540496698 | chr8:11882574-11882575 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs371631770 | chr8:11882587-11882588 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs61387792 | chr8:11882588-11882589 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs151272394 | chr8:11882589-11882590 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs398007083 | chr8:11882598-11882599 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs60181159 | chr8:11882599-11882600 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs555654617 | chr8:11882603-11882604 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs573509347 | chr8:11882622-11882623 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs544203708 | chr8:11882627-11882628 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs201437119 | chr8:11882641-11882642 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs546349110 | chr8:11882642-11882643 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs398007084 | chr8:11882650-11882651 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs368829572 | chr8:11882651-11882652 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs372238377 | chr8:11882652-11882653 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs547691853 | chr8:11882653-11882654 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs562383906 | chr8:11882659-11882660 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs182414318 | chr8:11882676-11882677 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs532860877 | chr8:11882730-11882731 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs181400931 | chr8:11882742-11882743 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs560279419 | chr8:11882764-11882765 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs185537929 | chr8:11882770-11882771 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs374447734 | chr8:11882775-11882776 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs549365877 | chr8:11882799-11882800 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs567960570 | chr8:11882826-11882827 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs189999608 | chr8:11882828-11882829 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs531953739 | chr8:11882833-11882834 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs550148331 | chr8:11882850-11882851 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs571583370 | chr8:11882855-11882856 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs114104733 | chr8:11882896-11882897 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs547923991 | chr8:11882897-11882898 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs566642610 | chr8:11882902-11882903 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs533977569 | chr8:11882910-11882911 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs73200503 | chr8:11882913-11882914 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs573868814 | chr8:11882917-11882918 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs34195527 | chr8:11882918-11882919 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs371344473 | chr8:11882919-11882920 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs6983419 | chr8:11882924-11882925 | Inactive region | Chromatin interactive region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
49 | rs181009819 | chr8:11882936-11882937 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs112446641 | chr8:11882937-11882938 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Crohn''s disease | 19220326 | CNVD |
Psoriasis | 19220326 | CNVD |
Prostate cancer | 21965145 | CNVD |
Prostate cancer | 18515986 | CNVD |
Chronic obstructive pulmonary disease | 20378733 | CNVD |
Autism | 18414403 | CNVD |
Cancer | 21183584 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 17603634 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Cervical cancer | 17311676 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Schizophrenia | 20877625 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Breast cancer | 17001317 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Heart disease | 21282601 | CNVD |
Prostate cancer | 16573809 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Colorectal cancer | 21297112 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Congenital diaphragmatic hernia | 21064195 | CNVD |
Autism | 22495311 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Intellectual disability | 22045946 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Breast cancer | 16608533 | CNVD |
Seminomas | 18059402 | CNVD |
Lung cancer | 18438408 | CNVD |
Lung squamous cell carcinoma | 22363434 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Gastric cancer | 18160780 | CNVD |
Breast cancer | 21990379 | CNVD |
Psoriasis | 20403174 | CNVD |
Psoriasis | 20663923 | CNVD |
Crohn''s disease | 16909382 | CNVD |
Cancer | 21129771 | CNVD |
Congenital diaphragmatic hernia | 21085971 | CNVD |
Crohn''s disease | 20877625 | CNVD |
Inflammatory disorder | 20877625 | CNVD |
Cardiac defect | 21933911 | CNVD |
Psoriasis | 18059266 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
Psoriasis | 20877625 | CNVD |
Mental retardation | 17847001 | CNVD |
Prostate cancer | 17217626 | CNVD |
Schizophrenia | 21399695 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Colorectal cancer | 19455253 | CNVD |
Psoriasis | 18848619 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Colorectal cancer | 17229543 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Immune disease | 21572526 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Kallmann Syndrome 2 | 22470819 | CNVD |
Developmental disorder | 20461109 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21364760 | CNVD |
Gastric cancer | 21811585 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Cancer | 20164919 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Renal cell carcinoma | 21215367 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Schizophrenia | 20967226 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Melanoma | 20688739 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:11884400-11885200 | Enhancers | Primary B cells from peripheral blood | blood |
2 | chr8:11887400-11887600 | Enhancers | Pancreas | Pancrea |
3 | chr8:11887600-11889200 | Weak transcription | Pancreas | Pancrea |
4 | chr8:11889200-11889600 | Enhancers | Pancreas | Pancrea |
5 | chr8:11973200-11973400 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
6 | chr8:11973200-11973600 | Active TSS | HUES48 Cell Line | embryonic stem cell |
7 | chr8:11973200-11973600 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
8 | chr8:11973200-11973600 | Active TSS | Cortex derived primary cultured neurospheres | brain |
9 | chr8:11973200-11973600 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
10 | chr8:11973200-11973600 | Active TSS | Primary mononuclear cells fromperipheralblood | Blood |
11 | chr8:11973200-11973600 | Active TSS | Colonic Mucosa | Colon |
12 | chr8:11973200-11973600 | Active TSS | Duodenum Smooth Muscle | Duodenum |
13 | chr8:11973200-11973600 | Active TSS | Esophagus | oesophagus |
14 | chr8:11973200-11973600 | Active TSS | Placenta | Placenta |
15 | chr8:11973200-11973600 | Active TSS | Fetal Stomach | stomach |
16 | chr8:11973200-11973600 | Active TSS | Fetal Thymus | thymus |
17 | chr8:11973200-11973600 | Active TSS | Left Ventricle | heart |
18 | chr8:11973200-11973600 | Active TSS | Thymus | Thymus |
19 | chr8:11973200-11973600 | Active TSS | A549 | lung |
20 | chr8:11973200-11973600 | Active TSS | Monocytes-CD14+_RO01746 | blood |
21 | chr8:11973200-11973600 | Active TSS | NHLF | lung |
22 | chr8:11973200-11973600 | Active TSS | Osteobl | bone |
23 | chr8:11973200-11973800 | Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
24 | chr8:11973200-11973800 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
25 | chr8:11973200-11973800 | Active TSS | Ovary | ovary |
26 | chr8:11973200-11973800 | Active TSS | Psoas Muscle | Psoas |
27 | chr8:11973200-11973800 | Active TSS | Right Ventricle | heart |
28 | chr8:11973200-11974000 | Active TSS | H1 Cell Line | embryonic stem cell |
29 | chr8:11973200-11974000 | Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
30 | chr8:11973200-11974000 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
31 | chr8:11973200-11974000 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
32 | chr8:11973200-11974000 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
33 | chr8:11973200-11974000 | Active TSS | Primary T regulatory cells fromperipheralblood | blood |
34 | chr8:11973200-11974000 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
35 | chr8:11973200-11974000 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
36 | chr8:11973200-11974000 | Active TSS | Muscle Satellite Cultured Cells | -- |
37 | chr8:11973200-11974000 | Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
38 | chr8:11973200-11974000 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
39 | chr8:11973200-11974000 | Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
40 | chr8:11973200-11974000 | Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
41 | chr8:11973200-11974000 | Active TSS | Adipose Nuclei | Adipose |
42 | chr8:11973200-11974000 | Active TSS | Brain Germinal Matrix | brain |
43 | chr8:11973200-11974000 | Active TSS | Fetal Brain Female | brain |
44 | chr8:11973200-11974000 | Active TSS | Fetal Muscle Leg | muscle |
45 | chr8:11973200-11974000 | Active TSS | Stomach Smooth Muscle | stomach |
46 | chr8:11973400-11973600 | Flanking Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
47 | chr8:11973400-11973800 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
48 | chr8:11973400-11973800 | Active TSS | Rectal Mucosa Donor 31 | rectum |
49 | chr8:11973400-11974000 | Active TSS | Brain Hippocampus Middle | brain |
50 | chr8:11973400-11974000 | Active TSS | NHDF-Ad | bronchial |