Variant report

Variant	nsv1017446
Chromosome Location	chr7:110875153-111056870
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1053)
CpG islands
(count:184)
Chromatin interactive
region (count:135)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1053 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:110966486-110967469	K562	blood:	n/a	n/a
2	ARID3A	chr7:110895612-110896118	K562	blood:	n/a	n/a
3	ARID3A	chr7:110968691-110969273	K562	blood:	n/a	n/a
4	ARID3A	chr7:110967767-110967878	K562	blood:	n/a	n/a
5	ARID3A	chr7:110946747-110946768	K562	blood:	n/a	n/a
6	ARID3A	chr7:111008626-111008764	K562	blood:	n/a	n/a
7	ARID3A	chr7:110953154-110953413	K562	blood:	n/a	n/a
8	ARID3A	chr7:110968080-110968421	K562	blood:	n/a	n/a
9	ARID3A	chr7:110997534-110997571	K562	blood:	n/a	n/a
10	ARID3A	chr7:111024781-111024793	K562	blood:	n/a	n/a
11	ARID3A	chr7:110969611-110970170	K562	blood:	n/a	n/a
12	ARID3A	chr7:111021038-111021344	HepG2	liver:	n/a	n/a
13	ATF1	chr7:111012802-111012930	K562	blood:	n/a	n/a
14	ATF1	chr7:111054516-111054769	K562	blood:	n/a	n/a
15	ATF1	chr7:110895660-110895855	K562	blood:	n/a	n/a
16	ATF1	chr7:110889894-110890092	K562	blood:	n/a	n/a
17	ATF2	chr7:111053704-111054218	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr7:110935269-110935465	K562	blood:	n/a	n/a
19	BATF	chr7:110960156-110960503	GM12878	blood:	n/a	n/a
20	BATF	chr7:110992517-110992735	GM12878	blood:	n/a	n/a
21	BATF	chr7:111029015-111029334	GM12878	blood:	n/a	n/a
22	BCL11A	chr7:111029036-111029324	GM12878	blood:	n/a	n/a
23	BHLHE40	chr7:110913546-110913742	K562	blood:	n/a	n/a
24	BHLHE40	chr7:110964357-110964616	GM12878	blood:	n/a	n/a
25	CBX3	chr7:110983007-110983449	K562	blood:	n/a	n/a
26	CBX3	chr7:111051022-111051426	K562	blood:	n/a	n/a
27	CBX3	chr7:110983037-110983415	K562	blood:	n/a	n/a
28	CBX3	chr7:110910820-110911290	K562	blood:	n/a	n/a
29	CBX3	chr7:110969313-110970175	K562	blood:	n/a	n/a
30	CCNT2	chr7:110953302-110953502	K562	blood:	n/a	n/a
31	CCNT2	chr7:110895712-110896018	K562	blood:	n/a	n/a
32	CCNT2	chr7:110896464-110896592	K562	blood:	n/a	n/a
33	CCNT2	chr7:110941498-110941584	K562	blood:	n/a	n/a
34	CEBPB	chr7:110953014-110953336	IMR90	lung:	n/a	chr7:110953149-110953162 chr7:110953149-110953160
35	CEBPB	chr7:110895680-110895932	K562	blood:	n/a	n/a
36	CEBPB	chr7:110906651-110907078	H1-hESC	embryonic stem cell:	n/a	chr7:110906880-110906891
37	CEBPB	chr7:111033008-111033349	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr7:111053689-111054137	H1-hESC	embryonic stem cell:	n/a	n/a
39	CEBPB	chr7:111004475-111004941	HCT-116	colon:	n/a	n/a
40	CEBPB	chr7:110906589-110907001	A549	lung:	n/a	chr7:110906880-110906891
41	CEBPB	chr7:110926298-110926561	A549	lung:	n/a	n/a
42	CEBPB	chr7:110900041-110900427	K562	blood:	n/a	n/a
43	CEBPB	chr7:110952993-110953347	ECC-1	luminal epithelium:	n/a	chr7:110953149-110953162 chr7:110953149-110953160
44	CEBPB	chr7:110906684-110907120	MCF-7	breast:	n/a	chr7:110906880-110906891
45	CEBPB	chr7:110906653-110907076	IMR90	lung:	n/a	chr7:110906880-110906891
46	CEBPB	chr7:111004463-111004919	HCT-116	colon:	n/a	n/a
47	CEBPB	chr7:111053686-111053711	A549	lung:	n/a	n/a
48	CEBPB	chr7:110900121-110900405	A549	lung:	n/a	n/a
49	CEBPB	chr7:111004360-111004835	A549	lung:	n/a	n/a
50	CEBPB	chr7:110906628-110907107	ECC-1	luminal epithelium:	n/a	chr7:110906880-110906891

(count:184 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:111033064-111033114	NH-A	brain:	n/a
2	chr7:111033064-111033114	NH-A	brain:	n/a
3	chr7:110879415-110879465	HPAEpiC	pulmonary alveolar:	n/a
4	chr7:110879415-110879465	Hepatocyte	liver:	n/a
5	chr7:111033064-111033114	AG04449	skin:	fetal
6	chr7:110879415-110879465	HRE	kidney:	n/a
7	chr7:110906785-110906835	U87	brain:	n/a
8	chr7:111033064-111033114	HRE	kidney:	n/a
9	chr7:110906785-110906835	PrEC	prostate:	n/a
10	chr7:110906785-110906835	Caco-2	colon:	n/a
11	chr7:111033064-111033114	A549	lung:	n/a
12	chr7:110879415-110879465	SKMC	muscle:	n/a
13	chr7:111033064-111033114	GM19239	blood:	n/a
14	chr7:111033064-111033114	ECC-1	luminal epithelium:	n/a
15	chr7:110879415-110879465	AG04449	skin:	fetal
16	chr7:110906785-110906835	T-47D	breast:	n/a
17	chr7:110879415-110879465	PANC-1	pancreas:	n/a
18	chr7:111033064-111033114	MCF10A-Er-Src	breast:	n/a
19	chr7:111033064-111033114	CMK	blood:	n/a
20	chr7:110879415-110879465	GM06990	blood:	n/a
21	chr7:110906785-110906835	HIPEpiC	eye:	n/a
22	chr7:110879415-110879465	SK-N-SH_RA	brain:	n/a
23	chr7:110906785-110906835	SK-N-MC	brain:	n/a
24	chr7:110906785-110906835	HEK293	kidney:	embryo
25	chr7:111033064-111033114	HL-60	blood:	n/a
26	chr7:110879415-110879465	HCPEpiC	choroid plexus:	n/a
27	chr7:110906785-110906835	GM12878	blood:	n/a
28	chr7:111033064-111033114	GM12892	blood:	n/a
29	chr7:111033064-111033114	LNCaP	prostate:	n/a
30	chr7:110879415-110879465	RPTEC	kidney:	n/a
31	chr7:111033064-111033114	Caco-2	colon:	n/a
32	chr7:110906785-110906835	Hepatocyte	liver:	n/a
33	chr7:111033064-111033114	HEEpiC	esophagus:	n/a
34	chr7:110879415-110879465	HL-60	blood:	n/a
35	chr7:111033064-111033114	SK-N-SH_RA	brain:	n/a
36	chr7:110906785-110906835	GM19239	blood:	n/a
37	chr7:111033064-111033114	RPTEC	kidney:	n/a
38	chr7:110879415-110879465	AoSMC	blood vessel:	n/a
39	chr7:110879415-110879465	LNCaP	prostate:	n/a
40	chr7:110906785-110906835	SAEC	small airway:	n/a
41	chr7:110879415-110879465	A549	lung:	n/a
42	chr7:110879415-110879465	HCF	heart:	n/a
43	chr7:110906785-110906835	HRE	kidney:	n/a
44	chr7:110906785-110906835	NHDF-neo	bronchial:	n/a
45	chr7:110879415-110879465	NT2-D1	testis:	n/a
46	chr7:111033064-111033114	SK-N-SH	brain:	n/a
47	chr7:110906785-110906835	AG09319	gingival:	n/a
48	chr7:111033064-111033114	HRPEpiC	eye:	n/a
49	chr7:110906785-110906835	HepG2	liver:	n/a
50	chr7:111033064-111033114	HNPCEpiC	eye:	n/a

(count:135 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr7:110929795..110932437-chr7:110933207..110936083,3	K562	blood:
2	chr7:110875743..110879019-chr7:110880390..110884102,5	K562	blood:
3	chr7:110873178..110876028-chr7:110879023..110881102,2	K562	blood:
4	chr7:110924432..110929578-chr7:110932859..110937635,6	K562	blood:
5	chr7:110876830..110878652-chr7:110880390..110881983,2	K562	blood:
6	chr7:110904002..110906677-chr7:110908987..110911839,2	K562	blood:
7	chr7:110969600..110972534-chr7:111078171..111081389,3	K562	blood:
8	chr7:111003207..111005251-chr7:111008050..111010228,2	K562	blood:
9	chr7:110924432..110929578-chr7:110932859..110937635,6	K562	blood:
10	chr7:110970635..110973843-chr7:110975141..110978905,5	K562	blood:
11	chr7:111050112..111052168-chr7:111053965..111056674,3	K562	blood:
12	chr7:110978869..110982048-chr7:110982767..110985792,3	K562	blood:
13	chr7:110959334..110960882-chr7:110965813..110967484,2	K562	blood:
14	chr7:110946954..110949529-chr7:111129446..111130953,2	MCF-7	breast:
15	chr7:110975243..110978153-chr7:110979724..110981495,2	K562	blood:
16	chr7:110890356..110892390-chr7:110893967..110896589,2	K562	blood:
17	chr7:110962126..110964268-chr7:110964422..110967257,2	K562	blood:
18	chr7:110919285..110921892-chr7:110924129..110926222,2	K562	blood:
19	chr7:110978869..110982048-chr7:110982767..110985792,3	K562	blood:
20	chr7:110962126..110964268-chr7:110964422..110967257,2	K562	blood:
21	chr7:110964713..110967341-chr7:110967524..110969143,2	K562	blood:
22	chr7:110948192..110950310-chr7:110952497..110954721,2	K562	blood:
23	chr7:110994535..110996072-chr7:110997457..110999303,2	K562	blood:
24	chr7:110977304..110981066-chr7:110982767..110987604,6	K562	blood:
25	chr7:110958175..110961174-chr7:110967524..110969443,2	K562	blood:
26	chr7:110864193..110867019-chr7:110872692..110875184,2	K562	blood:
27	chr7:110924432..110926999-chr7:110933691..110937635,4	K562	blood:
28	chr7:111014312..111015875-chr7:111016018..111018954,2	MCF-7	breast:
29	chr7:110946449..110947994-chr7:110949688..110952187,2	K562	blood:
30	chr7:111012849..111014530-chr7:111019458..111021313,2	K562	blood:
31	chr7:110953570..110955733-chr7:111376151..111377847,2	MCF-7	breast:
32	chr5:125812513..125813255-chr7:110998210..110998982,2	MCF-7	breast:
33	chr7:110962569..110964668-chr7:110968085..110971412,3	K562	blood:
34	chr7:111025105..111026879-chr7:111027995..111029881,2	K562	blood:
35	chr7:111043409..111046006-chr7:111053282..111056029,3	K562	blood:
36	chr7:110985007..110987369-chr7:110994363..110996141,2	K562	blood:
37	chr7:110962569..110964668-chr7:110968085..110971412,3	K562	blood:
38	chr7:111018295..111020688-chr7:111021531..111024788,3	MCF-7	breast:
39	chr7:110963413..110966213-chr7:110967085..110969024,2	K562	blood:
40	chr7:111001961..111006807-chr7:111013802..111016795,4	K562	blood:
41	chr7:110991909..110993941-chr7:110997470..110999246,2	K562	blood:
42	chr7:110959106..110960834-chr7:110964696..110967313,2	K562	blood:
43	chr7:110946494..110948605-chr7:110949688..110952299,2	K562	blood:
44	chr7:110901387..110901887-chr9:130159518..130160059,2	Hela-S3	cervix:
45	chr7:110910606..110912820-chr7:110916912..110919074,2	K562	blood:
46	chr7:111014312..111015875-chr7:111016018..111018954,2	MCF-7	breast:
47	chr7:110729634..110730189-chr7:110952732..110953606,2	MCF-7	breast:
48	chr12:108200986..108203742-chr7:111052172..111055145,3	MCF-7	breast:
49	chr7:110875743..110879019-chr7:110880390..110884102,5	K562	blood:
50	chr7:110941905..110944454-chr7:110944620..110946786,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DOCK4-7	chr7:110902289-110902553	expReg_chr7_8342_-

No data

Variant related genes	Relation type
ENSG00000227948	TF binding region
IMMP2L	TF binding region
ENSG00000243621	TF binding region
ENSG00000227948	CpG island
IMMP2L	CpG island
ENSG00000243621	CpG island
ENSG00000136856	chromatin interactions
ENSG00000227948	chromatin interactions
ENSG00000184903	chromatin interactions
ENSG00000243621	chromatin interactions
ENSG00000188825	chromatin interactions

Extended variants
information (count: 6027 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:6027 , 50 per page) page: 1 2 3 4 5 6 7 ... 121

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs37712	chr7:110875153-110875154	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs542286079	chr7:110875192-110875193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs560401636	chr7:110875198-110875199	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs572640889	chr7:110875203-110875204	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs546427351	chr7:110875242-110875243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs548201034	chr7:110875257-110875258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs564719694	chr7:110875276-110875277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs375167425	chr7:110875280-110875281	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs537051052	chr7:110875384-110875385	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs550243314	chr7:110875420-110875421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs562485150	chr7:110875441-110875442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs529679192	chr7:110875465-110875466	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs568012567	chr7:110875466-110875467	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs548235108	chr7:110875522-110875523	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs78702981	chr7:110875540-110875541	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs189489238	chr7:110875541-110875542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs150960115	chr7:110875551-110875552	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs192144317	chr7:110875590-110875591	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs536929387	chr7:110875608-110875609	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs369484120	chr7:110875610-110875611	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs537731008	chr7:110875618-110875619	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs184963672	chr7:110875659-110875660	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs201206595	chr7:110875663-110875664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs556211272	chr7:110875676-110875677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs78016082	chr7:110875688-110875689	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs140799042	chr7:110875707-110875708	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs150087266	chr7:110875714-110875715	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs572573686	chr7:110875753-110875754	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs572009542	chr7:110875754-110875755	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs147778699	chr7:110875805-110875806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs567019529	chr7:110875881-110875882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs558370405	chr7:110875896-110875897	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs576739767	chr7:110875943-110875944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs112031741	chr7:110875970-110875971	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs562261699	chr7:110875975-110875976	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs529653384	chr7:110875982-110875983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs541464622	chr7:110875997-110875998	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs111282000	chr7:110876019-110876020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs113821470	chr7:110876071-110876072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs568680511	chr7:110876075-110876076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs536182845	chr7:110876117-110876118	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs554162978	chr7:110876136-110876137	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs188535587	chr7:110876184-110876185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs143992292	chr7:110876195-110876196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs531427991	chr7:110876222-110876223	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs181196176	chr7:110876248-110876249	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs568271494	chr7:110876269-110876270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs535791692	chr7:110876288-110876289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs37713	chr7:110876320-110876321	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs143267302	chr7:110876341-110876342	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Squamous cell cancer	20885788	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	16397240	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	23792589	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Autism	19401682	CNVD
Non-small cell lung cancer	19889201	CNVD
Acute myeloid leukemia	18000384	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Metastatic melanoma	18483359	CNVD
Autism	18414403	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Melanoma	19188590	CNVD
small cell lung cancer	20016488	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
Breast cancer	21509527	CNVD
Schizophrenia	23813976	CNVD
Autism	20531469	CNVD
early-passage human iPS cells	21368824	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:859 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:110871000-110878600	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr7:110871400-110878400	Weak transcription	Adipose Nuclei	Adipose
3	chr7:110873000-110878000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr7:110873000-110878200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr7:110873200-110878000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:110873200-110878000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr7:110873200-110878000	Weak transcription	Osteobl	bone
8	chr7:110873200-110878200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr7:110873200-110878200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr7:110873200-110878200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr7:110873200-110878600	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr7:110873200-110878600	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr7:110873200-110878600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
14	chr7:110873200-110878600	Weak transcription	HUVEC	blood vessel
15	chr7:110873200-110878600	Weak transcription	NHLF	lung
16	chr7:110873200-110879000	Weak transcription	Right Ventricle	heart
17	chr7:110873200-110879600	Weak transcription	K562	blood
18	chr7:110873400-110878600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr7:110874400-110879200	Weak transcription	A549	lung
20	chr7:110878000-110878200	Enhancers	Pancreatic Islets	Pancreatic Islet
21	chr7:110878000-110878600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr7:110878000-110878800	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr7:110878000-110878800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr7:110878000-110878800	Enhancers	Osteobl	bone
25	chr7:110878000-110879000	Enhancers	Brain Germinal Matrix	brain
26	chr7:110878000-110880000	Enhancers	Fetal Lung	lung
27	chr7:110878200-110878400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr7:110878200-110878600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr7:110878200-110878600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr7:110878200-110879000	Enhancers	iPS-20b Cell Line	embryonic stem cell
31	chr7:110878200-110879600	Active TSS	Pancreatic Islets	Pancreatic Islet
32	chr7:110878200-110881000	Enhancers	Cortex derived primary cultured neurospheres	brain
33	chr7:110878400-110878600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr7:110878400-110878600	Enhancers	Adipose Nuclei	Adipose
35	chr7:110878400-110878600	Enhancers	Duodenum Smooth Muscle	Duodenum
36	chr7:110878600-110878800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr7:110878600-110878800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr7:110878600-110878800	Enhancers	Brain Inferior Temporal Lobe	brain
39	chr7:110878600-110878800	Enhancers	Colon Smooth Muscle	Colon
40	chr7:110878600-110878800	Flanking Active TSS	NHLF	lung
41	chr7:110878600-110879000	Enhancers	HUES48 Cell Line	embryonic stem cell
42	chr7:110878600-110879200	Enhancers	HUES6 Cell Line	embryonic stem cell
43	chr7:110878600-110879200	Active TSS	Primary hematopoietic stem cells	blood
44	chr7:110878600-110879200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr7:110878600-110879200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr7:110878600-110879400	Enhancers	iPS-15b Cell Line	embryonic stem cell
47	chr7:110878600-110879400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr7:110878600-110879400	Flanking Active TSS	Adipose Nuclei	Adipose
49	chr7:110878600-110879400	Active TSS	Brain Substantia Nigra	brain
50	chr7:110878600-110879400	Active TSS	Duodenum Smooth Muscle	Duodenum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links