Variant report

Variant nsv1017488
Chromosome Location chr5:152239716-152383640
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:152237400-152240400 Weak transcription Stomach Mucosa stomach
2 chr5:152240000-152240600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr5:152240200-152240800 Enhancers Pancreatic Islets Pancreatic Islet
4 chr5:152240400-152241200 Enhancers Stomach Mucosa stomach
5 chr5:152241000-152241600 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr5:152243200-152245200 Enhancers HSMM muscle
7 chr5:152246000-152247400 Enhancers HUES48 Cell Line embryonic stem cell
8 chr5:152247200-152247400 Enhancers H1 Cell Line embryonic stem cell
9 chr5:152247400-152247800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
10 chr5:152247400-152248400 Weak transcription H1 Cell Line embryonic stem cell
11 chr5:152248400-152248600 Enhancers H1 Cell Line embryonic stem cell
12 chr5:152253400-152253600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
13 chr5:152253400-152253600 ZNF genes & repeats Gastric stomach
14 chr5:152261400-152262800 Enhancers Fetal Brain Male brain
15 chr5:152262000-152263200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
16 chr5:152262200-152264800 Enhancers Brain Germinal Matrix brain
17 chr5:152262400-152263200 Enhancers Fetal Brain Female brain
18 chr5:152279800-152280200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr5:152279800-152280600 Enhancers HUES64 Cell Line embryonic stem cell
20 chr5:152279800-152280800 Enhancers HUES48 Cell Line embryonic stem cell
21 chr5:152280000-152280600 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr5:152280000-152280800 Enhancers iPS-20b Cell Line embryonic stem cell
23 chr5:152281200-152282200 Enhancers Liver Liver
24 chr5:152282200-152287000 Weak transcription Liver Liver
25 chr5:152287000-152287400 Active TSS Pancreatic Islets Pancreatic Islet
26 chr5:152287000-152287600 Active TSS Liver Liver
27 chr5:152287400-152287600 Flanking Active TSS Pancreatic Islets Pancreatic Islet
28 chr5:152287600-152287800 Flanking Active TSS Liver Liver
29 chr5:152287800-152288000 Enhancers Liver Liver
30 chr5:152289600-152289800 Enhancers Liver Liver
31 chr5:152304600-152306000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr5:152305600-152305800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
33 chr5:152306400-152306800 Enhancers Pancreatic Islets Pancreatic Islet
34 chr5:152307600-152308000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr5:152308000-152309400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr5:152309400-152310000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr5:152312400-152313000 Enhancers Cortex derived primary cultured neurospheres brain
38 chr5:152317000-152318600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr5:152317800-152318600 Enhancers Liver Liver
40 chr5:152318600-152318800 Flanking Active TSS Liver Liver
41 chr5:152318800-152319000 Active TSS Liver Liver
42 chr5:152328800-152329000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr5:152329000-152330800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr5:152329600-152330600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr5:152330000-152330600 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr5:152330800-152331200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr5:152331200-152332400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:152333000-152333600 Enhancers Liver Liver
49 chr5:152333600-152334000 Flanking Active TSS Liver Liver
50 chr5:152334000-152334200 Enhancers Liver Liver

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