Variant report

Variant nsv1017633
Chromosome Location chr6:53935336-54118476
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:893 , 50 per page) page: 1 2 3 4 5 6 7 ... 18
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53921600-53936600 Weak transcription Right Ventricle heart
2 chr6:53928000-53939000 Weak transcription Left Ventricle heart
3 chr6:53928600-53939000 Weak transcription Fetal Heart heart
4 chr6:53934800-53935400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr6:53934800-53935400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr6:53934800-53935400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr6:53934800-53935400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
8 chr6:53934800-53935400 Active TSS Aorta Aorta
9 chr6:53934800-53935400 Flanking Active TSS Liver Liver
10 chr6:53934800-53935400 Enhancers Brain Hippocampus Middle brain
11 chr6:53934800-53935400 Active TSS Pancreatic Islets Pancreatic Islet
12 chr6:53934800-53935400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
13 chr6:53934800-53935400 Active TSS Right Atrium heart
14 chr6:53934800-53935400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
15 chr6:53934800-53935400 Enhancers Stomach Mucosa stomach
16 chr6:53934800-53935400 Weak transcription HSMM muscle
17 chr6:53934800-53935400 Flanking Active TSS Osteobl bone
18 chr6:53935000-53935400 Flanking Active TSS Colon Smooth Muscle Colon
19 chr6:53935200-53935400 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr6:53935200-53935400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr6:53935200-53935400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:53935200-53935400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:53935200-53935400 Enhancers Adipose Nuclei Adipose
24 chr6:53935200-53935400 Enhancers Fetal Lung lung
25 chr6:53935200-53935400 Enhancers Psoas Muscle Psoas
26 chr6:53935200-53935400 Enhancers HepG2 liver
27 chr6:53935200-53935400 Enhancers NHEK skin
28 chr6:53935200-53935600 Enhancers Skeletal Muscle Male skeletal muscle
29 chr6:53935200-53936600 Weak transcription HUVEC blood vessel
30 chr6:53935200-53939400 Weak transcription Ovary ovary
31 chr6:53935400-53935600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:53935400-53935600 Enhancers Rectal Mucosa Donor 31 rectum
33 chr6:53935400-53935600 Enhancers Skeletal Muscle Female skeletal muscle
34 chr6:53935400-53935600 Enhancers HSMM muscle
35 chr6:53935400-53935600 Enhancers Osteobl bone
36 chr6:53935400-53936400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr6:53935400-53936600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr6:53935400-53936600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr6:53935400-53936600 Weak transcription Psoas Muscle Psoas
40 chr6:53935400-53936800 Weak transcription Adipose Nuclei Adipose
41 chr6:53935400-53937800 Weak transcription Fetal Stomach stomach
42 chr6:53935400-53940600 Weak transcription Liver Liver
43 chr6:53935400-53944600 Weak transcription Right Atrium heart
44 chr6:53935600-53936600 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr6:53935600-53936600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:53935600-53936600 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr6:53935600-53936600 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr6:53935600-53936600 Weak transcription HSMM muscle
49 chr6:53935600-53936600 Weak transcription Osteobl bone
50 chr6:53936400-53936600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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