Variant report

Variant nsv1017679
Chromosome Location chr5:12457731-13393269
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:866 , 50 per page) page: 1 2 3 4 5 6 7 ... 18
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:12459200-12460000 Enhancers Fetal Brain Female brain
2 chr5:12460200-12461400 Enhancers HMEC breast
3 chr5:12462000-12469200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr5:12488200-12488400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:12488200-12488600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:12501600-12505600 Weak transcription H9 Cell Line embryonic stem cell
7 chr5:12503400-12504600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
8 chr5:12504000-12505000 Enhancers iPS-18 Cell Line embryonic stem cell
9 chr5:12504200-12505000 Enhancers iPS-20b Cell Line embryonic stem cell
10 chr5:12504200-12507000 Enhancers HUES48 Cell Line embryonic stem cell
11 chr5:12504400-12506200 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr5:12504600-12505000 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr5:12504600-12507400 Enhancers HUES64 Cell Line embryonic stem cell
14 chr5:12505000-12505200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
15 chr5:12505000-12505200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
16 chr5:12505000-12506000 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr5:12505200-12505400 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr5:12505200-12505400 Enhancers iPS-20b Cell Line embryonic stem cell
19 chr5:12505400-12505600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
20 chr5:12505400-12505800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
21 chr5:12505600-12505800 Enhancers ES-WA7 Cell Line embryonic stem cell
22 chr5:12505600-12506400 Enhancers iPS-20b Cell Line embryonic stem cell
23 chr5:12505800-12506000 Enhancers H9 Cell Line embryonic stem cell
24 chr5:12505800-12506400 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr5:12507200-12507400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr5:12507600-12522400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr5:12509800-12511800 Weak transcription H1 Cell Line embryonic stem cell
28 chr5:12532200-12532800 ZNF genes & repeats Pancreas Pancrea
29 chr5:12535400-12535600 Weak transcription H9 Cell Line embryonic stem cell
30 chr5:12535600-12535800 Enhancers H9 Cell Line embryonic stem cell
31 chr5:12562600-12569200 Weak transcription Placenta Placenta
32 chr5:12565600-12570400 Weak transcription K562 blood
33 chr5:12567600-12568200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:12569200-12570800 Strong transcription Placenta Placenta
35 chr5:12570400-12572400 Strong transcription K562 blood
36 chr5:12570800-12573800 Weak transcription Placenta Placenta
37 chr5:12572400-12573000 Weak transcription K562 blood
38 chr5:12573000-12576200 Active TSS K562 blood
39 chr5:12573800-12575400 Active TSS Placenta Placenta
40 chr5:12576200-12577600 Weak transcription K562 blood
41 chr5:12577800-12578000 ZNF genes & repeats K562 blood
42 chr5:12578000-12581200 Weak transcription K562 blood
43 chr5:12579800-12580800 Enhancers iPS-20b Cell Line embryonic stem cell
44 chr5:12579800-12581000 Enhancers HUES48 Cell Line embryonic stem cell
45 chr5:12580200-12580800 Enhancers HUES64 Cell Line embryonic stem cell
46 chr5:12580400-12580800 Enhancers HUES6 Cell Line embryonic stem cell
47 chr5:12581200-12582000 Strong transcription K562 blood
48 chr5:12582000-12596000 Weak transcription K562 blood
49 chr5:12596000-12596400 Strong transcription K562 blood
50 chr5:12596400-12597400 Weak transcription K562 blood

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