Variant report

Variant nsv1017812
Chromosome Location chr5:152220845-152467431
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:269 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:152231400-152232000 Enhancers Stomach Mucosa stomach
2 chr5:152232000-152235200 Weak transcription Stomach Mucosa stomach
3 chr5:152232800-152235200 Enhancers iPS-15b Cell Line embryonic stem cell
4 chr5:152233000-152233400 Enhancers H9 Cell Line embryonic stem cell
5 chr5:152233000-152233800 Enhancers ES-I3 Cell Line embryonic stem cell
6 chr5:152233000-152234600 Enhancers H1 Cell Line embryonic stem cell
7 chr5:152233000-152235400 Enhancers iPS-18 Cell Line embryonic stem cell
8 chr5:152233000-152236200 Enhancers iPS-20b Cell Line embryonic stem cell
9 chr5:152233200-152235600 Enhancers HUES6 Cell Line embryonic stem cell
10 chr5:152233200-152235800 Enhancers HUES64 Cell Line embryonic stem cell
11 chr5:152233400-152233800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
12 chr5:152233400-152235800 Enhancers HUES48 Cell Line embryonic stem cell
13 chr5:152233800-152234200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr5:152234000-152236400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr5:152234200-152236000 Enhancers ES-I3 Cell Line embryonic stem cell
16 chr5:152234800-152235200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr5:152235200-152235800 Enhancers Stomach Mucosa stomach
18 chr5:152235800-152237000 Weak transcription Stomach Mucosa stomach
19 chr5:152236000-152237000 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr5:152236400-152236800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr5:152236800-152238400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:152237000-152237400 Enhancers Stomach Mucosa stomach
23 chr5:152237200-152237400 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr5:152237200-152237400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:152237200-152237600 Enhancers Gastric stomach
26 chr5:152237400-152240400 Weak transcription Stomach Mucosa stomach
27 chr5:152237600-152238200 Weak transcription Gastric stomach
28 chr5:152238200-152238400 Enhancers Gastric stomach
29 chr5:152240000-152240600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr5:152240200-152240800 Enhancers Pancreatic Islets Pancreatic Islet
31 chr5:152240400-152241200 Enhancers Stomach Mucosa stomach
32 chr5:152241000-152241600 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr5:152243200-152245200 Enhancers HSMM muscle
34 chr5:152246000-152247400 Enhancers HUES48 Cell Line embryonic stem cell
35 chr5:152247200-152247400 Enhancers H1 Cell Line embryonic stem cell
36 chr5:152247400-152247800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
37 chr5:152247400-152248400 Weak transcription H1 Cell Line embryonic stem cell
38 chr5:152248400-152248600 Enhancers H1 Cell Line embryonic stem cell
39 chr5:152253400-152253600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
40 chr5:152253400-152253600 ZNF genes & repeats Gastric stomach
41 chr5:152261400-152262800 Enhancers Fetal Brain Male brain
42 chr5:152262000-152263200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr5:152262200-152264800 Enhancers Brain Germinal Matrix brain
44 chr5:152262400-152263200 Enhancers Fetal Brain Female brain
45 chr5:152279800-152280200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr5:152279800-152280600 Enhancers HUES64 Cell Line embryonic stem cell
47 chr5:152279800-152280800 Enhancers HUES48 Cell Line embryonic stem cell
48 chr5:152280000-152280600 Enhancers iPS-18 Cell Line embryonic stem cell
49 chr5:152280000-152280800 Enhancers iPS-20b Cell Line embryonic stem cell
50 chr5:152281200-152282200 Enhancers Liver Liver

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