Variant report

Variant	nsv1019113
Chromosome Location	chr6:161127584-161197558
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1173)
CpG islands
(count:732)
Chromatin interactive
region (count:22)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1173 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:161154158-161154390	K562	blood:	n/a	n/a
2	ARID3A	chr6:161171366-161171550	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:161130029-161130039	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:161154123-161154426	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:161195588-161195744	K562	blood:	n/a	n/a
6	ATF1	chr6:161195553-161195712	K562	blood:	n/a	n/a
7	ATF2	chr6:161188260-161188782	GM12878	blood:	n/a	n/a
8	ATF2	chr6:161161857-161162562	GM12878	blood:	n/a	n/a
9	ATF2	chr6:161156393-161157074	GM12878	blood:	n/a	n/a
10	ATF2	chr6:161161986-161162462	GM12878	blood:	n/a	n/a
11	ATF2	chr6:161156066-161157128	GM12878	blood:	n/a	n/a
12	ATF2	chr6:161162690-161163528	GM12878	blood:	n/a	n/a
13	ATF2	chr6:161171169-161171825	GM12878	blood:	n/a	n/a
14	BACH1	chr6:161151957-161152298	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr6:161195550-161195750	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr6:161195553-161195793	K562	blood:	n/a	n/a
17	BACH1	chr6:161188007-161188814	H1-hESC	embryonic stem cell:	n/a	n/a
18	BATF	chr6:161171251-161171600	GM12878	blood:	n/a	n/a
19	BATF	chr6:161156411-161156983	GM12878	blood:	n/a	n/a
20	BATF	chr6:161156225-161157003	GM12878	blood:	n/a	n/a
21	BATF	chr6:161162074-161162446	GM12878	blood:	n/a	n/a
22	BATF	chr6:161163213-161163486	GM12878	blood:	n/a	n/a
23	BATF	chr6:161161952-161162564	GM12878	blood:	n/a	n/a
24	BCL11A	chr6:161162020-161162458	GM12878	blood:	n/a	n/a
25	BCL11A	chr6:161156439-161156943	GM12878	blood:	n/a	n/a
26	BCL11A	chr6:161162028-161162492	GM12878	blood:	n/a	n/a
27	BCL3	chr6:161156386-161156997	GM12878	blood:	n/a	n/a
28	BCL3	chr6:161156575-161157006	GM12878	blood:	n/a	n/a
29	BCLAF1	chr6:161156207-161157052	GM12878	blood:	n/a	n/a
30	BCLAF1	chr6:161162003-161162409	GM12878	blood:	n/a	n/a
31	BCLAF1	chr6:161161888-161162487	GM12878	blood:	n/a	n/a
32	BCLAF1	chr6:161188232-161188830	GM12878	blood:	n/a	n/a
33	BHLHE40	chr6:161156617-161156923	GM12878	blood:	n/a	n/a
34	BHLHE40	chr6:161154332-161154359	K562	blood:	n/a	n/a
35	BHLHE40	chr6:161188391-161188713	GM12878	blood:	n/a	n/a
36	BHLHE40	chr6:161171335-161171592	K562	blood:	n/a	n/a
37	BHLHE40	chr6:161162093-161162396	GM12878	blood:	n/a	n/a
38	BRCA1	chr6:161189398-161189449	GM12878	blood:	n/a	n/a
39	BRCA1	chr6:161188458-161188461	HepG2	liver:	n/a	n/a
40	BRCA1	chr6:161187996-161188190	H1-hESC	embryonic stem cell:	n/a	n/a
41	BRCA1	chr6:161162285-161162395	GM12878	blood:	n/a	n/a
42	CEBPB	chr6:161188494-161188649	HepG2	liver:	n/a	n/a
43	CEBPB	chr6:161162055-161162346	GM12878	blood:	n/a	n/a
44	CEBPB	chr6:161171312-161171536	K562	blood:	n/a	n/a
45	CEBPB	chr6:161151605-161151677	IMR90	lung:	n/a	chr6:161151652-161151665
46	CHD1	chr6:161188483-161188627	GM12878	blood:	n/a	n/a
47	CHD2	chr6:161188519-161188710	GM12878	blood:	n/a	n/a
48	CHD2	chr6:161188069-161188169	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD2	chr6:161188054-161188088	HepG2	liver:	n/a	n/a
50	CHD2	chr6:161188410-161188713	H1-hESC	embryonic stem cell:	n/a	n/a

(count:732 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:161188022-161188072	HRE	kidney:	n/a
2	chr6:161188337-161188387	BE2_C	brain:	n/a
3	chr6:161190726-161190776	GM06990	blood:	n/a
4	chr6:161188022-161188072	HNPCEpiC	eye:	n/a
5	chr6:161188337-161188387	HCT-116	colon:	n/a
6	chr6:161188183-161188233	HMEC	breast:	n/a
7	chr6:161186852-161186902	K562	blood:	n/a
8	chr6:161188322-161188372	BE2_C	brain:	n/a
9	chr6:161188638-161188688	NH-A	brain:	n/a
10	chr6:161188822-161188872	H1-hESC	embryonic stem cell:	embryo
11	chr6:161188022-161188072	NB4	blood:	n/a
12	chr6:161188183-161188233	HEEpiC	esophagus:	n/a
13	chr6:161188574-161188624	PrEC	prostate:	n/a
14	chr6:161188529-161188579	HRE	kidney:	n/a
15	chr6:161188529-161188579	HEEpiC	esophagus:	n/a
16	chr6:161188574-161188624	ECC-1	luminal epithelium:	n/a
17	chr6:161188638-161188688	RPTEC	kidney:	n/a
18	chr6:161185585-161185635	K562	blood:	n/a
19	chr6:161188183-161188233	HCF	heart:	n/a
20	chr6:161174486-161174536	AG09319	gingival:	n/a
21	chr6:161188022-161188072	Hepatocyte	liver:	n/a
22	chr6:161188574-161188624	HRE	kidney:	n/a
23	chr6:161188529-161188579	NT2-D1	testis:	n/a
24	chr6:161188183-161188233	HIPEpiC	eye:	n/a
25	chr6:161188337-161188387	A549	lung:	n/a
26	chr6:161174486-161174536	HIPEpiC	eye:	n/a
27	chr6:161188638-161188688	NHBE	bronchial:	n/a
28	chr6:161186852-161186902	GM19239	blood:	n/a
29	chr6:161188022-161188072	GM06990	blood:	n/a
30	chr6:161188322-161188372	HCM	heart:	n/a
31	chr6:161188822-161188872	CMK	blood:	n/a
32	chr6:161188822-161188872	HCPEpiC	choroid plexus:	n/a
33	chr6:161188638-161188688	SAEC	small airway:	n/a
34	chr6:161186852-161186902	HCPEpiC	choroid plexus:	n/a
35	chr6:161188183-161188233	AG09309	skin:	n/a
36	chr6:161188638-161188688	HMEC	breast:	n/a
37	chr6:161188022-161188072	K562	blood:	n/a
38	chr6:161188322-161188372	GM19239	blood:	n/a
39	chr6:161188183-161188233	Hepatocyte	liver:	n/a
40	chr6:161188183-161188233	GM12878	blood:	n/a
41	chr6:161188822-161188872	HL-60	blood:	n/a
42	chr6:161174486-161174536	U87	brain:	n/a
43	chr6:161190726-161190776	GM19239	blood:	n/a
44	chr6:161185585-161185635	IMR90	lung:	fetal
45	chr6:161185585-161185635	SKMC	muscle:	n/a
46	chr6:161188322-161188372	NB4	blood:	n/a
47	chr6:161188529-161188579	MCF10A-Er-Src	breast:	n/a
48	chr6:161190726-161190776	SK-N-SH	brain:	n/a
49	chr6:161190726-161190776	HCPEpiC	choroid plexus:	n/a
50	chr6:161186852-161186902	HCT-116	colon:	n/a

(count:22 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:161183337..161185501-chr6:161187046..161189123,2	K562	blood:
2	chr6:161183337..161185501-chr6:161187046..161189123,2	K562	blood:
3	chr6:161170784..161171753-chr6:161794646..161795782,4	MCF-7	breast:
4	chr6:161170865..161172640-chr6:161793998..161795799,2	MCF-7	breast:
5	chr6:161152558..161155557-chr6:161793126..161797169,4	K562	blood:
6	chr6:161178222..161180525-chr6:161182750..161185405,2	K562	blood:
7	chr6:161185948..161188243-chr6:161411812..161413951,2	K562	blood:
8	chr6:161152558..161154302-chr6:161794607..161797169,2	K562	blood:
9	chr6:161135262..161137526-chr6:161141388..161143611,2	K562	blood:
10	chr6:161125304..161127777-chr6:161128271..161131075,2	K562	blood:
11	chr6:161135262..161137526-chr6:161141388..161143611,2	K562	blood:
12	chr6:161178222..161180525-chr6:161182750..161185405,2	K562	blood:
13	chr6:161153756..161154634-chr6:161794865..161795506,2	K562	blood:
14	chr6:161170972..161171781-chr6:161412957..161413893,2	MCF-7	breast:
15	chr6:161139981..161142405-chr6:161144900..161146552,2	K562	blood:
16	chr6:161171347..161171874-chr6:161413503..161414501,3	K562	blood:
17	chr6:161170261..161171981-chr6:161410808..161413803,2	K562	blood:
18	chr6:161171318..161172128-chr6:161791567..161792523,2	K562	blood:
19	chr6:161139981..161142405-chr6:161144900..161146552,2	K562	blood:
20	chr6:161154056..161155892-chr6:161501781..161503522,2	K562	blood:
21	chr6:161196367..161198386-chr6:161199110..161200907,2	K562	blood:
22	chr6:161153719..161154752-chr6:161413517..161414074,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LPA-5	chr6:161158176-161158373	NONHSAT115913
2	lnc-LPA-5	chr6:161157586-161157865	NONHSAT115913
3	lnc-LPA-5	chr6:161156572-161157283	NONHSAT115913

No data

Variant related genes	Relation type
PLG	TF binding region
PLG	CpG island
ENSG00000272841	chromatin interactions
ENSG00000122194	chromatin interactions
ENSG00000085511	chromatin interactions

Extended variants
information (count: 2949 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:2949 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs369616302	chr6:161127588-161127589	Transcr. at gene 5' and 3' Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs192461252	chr6:161127589-161127590	Transcr. at gene 5' and 3' Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs376903431	chr6:161127599-161127600	Transcr. at gene 5' and 3' Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs201728206	chr6:161127600-161127601	Transcr. at gene 5' and 3' Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs372555905	chr6:161127612-161127613	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs377075321	chr6:161127618-161127619	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs547042354	chr6:161127628-161127629	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs570966066	chr6:161127670-161127671	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs572592883	chr6:161127672-161127673	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs145530654	chr6:161127675-161127676	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs375718953	chr6:161127678-161127679	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs183882362	chr6:161127685-161127686	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs570362826	chr6:161127721-161127722	Transcr. at gene 5' and 3' Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs200723447	chr6:161127800-161127801	Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs555820228	chr6:161127801-161127802	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs572425870	chr6:161127910-161127911	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs188159767	chr6:161127915-161127916	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs541572635	chr6:161127930-161127931	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs370504830	chr6:161127983-161127984	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs558325917	chr6:161128003-161128004	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs578032609	chr6:161128016-161128017	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs369027020	chr6:161128042-161128043	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs77120139	chr6:161128170-161128171	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs374428431	chr6:161128171-161128172	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs4252071	chr6:161128241-161128242	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs4252072	chr6:161128264-161128265	Flanking Active TSS Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs541689735	chr6:161128276-161128277	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs181409745	chr6:161128279-161128280	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs148432914	chr6:161128293-161128294	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs564252669	chr6:161128312-161128313	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs368273387	chr6:161128315-161128316	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs532871882	chr6:161128371-161128372	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs184555866	chr6:161128387-161128388	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs536159841	chr6:161128398-161128399	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs4252073	chr6:161128399-161128400	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs549660191	chr6:161128400-161128401	Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs566368993	chr6:161128426-161128427	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs142907605	chr6:161128458-161128459	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs4252074	chr6:161128531-161128532	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs578072139	chr6:161128545-161128546	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs537113514	chr6:161128549-161128550	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs543426117	chr6:161128554-161128555	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs556343332	chr6:161128577-161128578	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs576109928	chr6:161128589-161128590	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs4252075	chr6:161128617-161128618	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs561687863	chr6:161128628-161128629	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs572004723	chr6:161128658-161128659	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs371083243	chr6:161128723-161128724	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs140789621	chr6:161128745-161128746	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs540661824	chr6:161128749-161128750	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Developmental delay	21147756	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chordoma	18071362	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Breast cancer	16397240	CNVD
Atherosclerosis	21956041	CNVD
Maculopathy	20981449	CNVD
Retinoblastoma	22278416	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Ovarian cancer	20844748	CNVD
Uveal melanoma	20484589	CNVD
Glioblastoma multiforme	19435819	CNVD
Astrocytoma	16205629	CNVD
Parkinson disease	17160897	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Medulloblastoma	21163964	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:320 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:161124800-161127600	Enhancers	Fetal Intestine Large	intestine
2	chr6:161125200-161128800	Enhancers	HepG2	liver
3	chr6:161126400-161130400	Weak transcription	Fetal Intestine Small	intestine
4	chr6:161127400-161127800	Transcr. at gene 5' and 3'	Liver	Liver
5	chr6:161127600-161129400	Weak transcription	Fetal Intestine Large	intestine
6	chr6:161127800-161128400	Flanking Active TSS	Liver	Liver
7	chr6:161128400-161129400	Enhancers	Liver	Liver
8	chr6:161128800-161129200	Weak transcription	HepG2	liver
9	chr6:161129200-161131000	Enhancers	HepG2	liver
10	chr6:161129400-161129600	Enhancers	Fetal Intestine Large	intestine
11	chr6:161129400-161129800	Flanking Active TSS	Liver	Liver
12	chr6:161129400-161130800	Enhancers	HUVEC	blood vessel
13	chr6:161129600-161130000	Weak transcription	Fetal Intestine Large	intestine
14	chr6:161129800-161130200	Active TSS	Liver	Liver
15	chr6:161130000-161131000	Enhancers	Fetal Intestine Large	intestine
16	chr6:161130200-161130400	Flanking Active TSS	Liver	Liver
17	chr6:161130400-161131000	Enhancers	Fetal Intestine Small	intestine
18	chr6:161130400-161131200	Transcr. at gene 5' and 3'	Liver	Liver
19	chr6:161130600-161131000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr6:161131200-161138800	Genic enhancers	Liver	Liver
21	chr6:161134000-161134200	Enhancers	Fetal Muscle Leg	muscle
22	chr6:161135200-161137200	Enhancers	HSMMtube	muscle
23	chr6:161135400-161137200	Enhancers	NHDF-Ad	bronchial
24	chr6:161135800-161136800	Enhancers	Rectal Smooth Muscle	rectum
25	chr6:161135800-161137000	Enhancers	Fetal Muscle Leg	muscle
26	chr6:161137000-161137600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr6:161138600-161139000	Enhancers	Breast Myoepithelial Primary Cells	Breast
28	chr6:161138800-161140000	Strong transcription	Liver	Liver
29	chr6:161140000-161140800	Genic enhancers	Liver	Liver
30	chr6:161140800-161175200	Strong transcription	Liver	Liver
31	chr6:161154200-161154400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr6:161154200-161154400	Enhancers	Brain Cingulate Gyrus	brain
33	chr6:161154200-161156000	Enhancers	GM12878-XiMat	blood
34	chr6:161156000-161156200	Flanking Active TSS	GM12878-XiMat	blood
35	chr6:161156200-161156400	Enhancers	GM12878-XiMat	blood
36	chr6:161156400-161156600	Flanking Active TSS	GM12878-XiMat	blood
37	chr6:161156600-161158600	Enhancers	GM12878-XiMat	blood
38	chr6:161158600-161159600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr6:161158600-161159800	ZNF genes & repeats	GM12878-XiMat	blood
40	chr6:161158800-161159200	Enhancers	HMEC	breast
41	chr6:161159200-161159400	Enhancers	NHEK	skin
42	chr6:161159800-161160000	Weak transcription	GM12878-XiMat	blood
43	chr6:161160000-161161000	Enhancers	GM12878-XiMat	blood
44	chr6:161161000-161163200	Flanking Active TSS	GM12878-XiMat	blood
45	chr6:161161000-161164000	Enhancers	Primary B cells from peripheral blood	blood
46	chr6:161161200-161163000	Enhancers	Primary B cells from cord blood	blood
47	chr6:161163200-161164000	Enhancers	GM12878-XiMat	blood
48	chr6:161164000-161165000	Weak transcription	GM12878-XiMat	blood
49	chr6:161165000-161165200	Enhancers	GM12878-XiMat	blood
50	chr6:161165200-161167400	ZNF genes & repeats	GM12878-XiMat	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links