Variant report

Variant	nsv1019222
Chromosome Location	chr9:6328242-6402856
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr9:6355807-6355988	GM12878	blood:	n/a	chr9:6355904-6355915
2	BHLHE40	chr9:6355818-6355946	HepG2	liver:	n/a	n/a
3	BHLHE40	chr9:6355705-6356113	GM12878	blood:	n/a	n/a
4	BRCA1	chr9:6354191-6354410	Hela-S3	cervix:	n/a	n/a
5	CEBPB	chr9:6356965-6357266	HepG2	liver:	n/a	chr9:6357095-6357108 chr9:6357095-6357108 chr9:6357095-6357106 chr9:6357097-6357108
6	CEBPB	chr9:6383754-6384293	IMR90	lung:	n/a	n/a
7	CEBPB	chr9:6357057-6357205	H1-hESC	embryonic stem cell:	n/a	chr9:6357095-6357108 chr9:6357095-6357108 chr9:6357095-6357106 chr9:6357097-6357108
8	CEBPB	chr9:6382717-6383026	IMR90	lung:	n/a	n/a
9	CEBPB	chr9:6356584-6357272	Hela-S3	cervix:	n/a	chr9:6357095-6357108 chr9:6357095-6357108 chr9:6357095-6357106 chr9:6357097-6357108
10	CEBPB	chr9:6357011-6357239	A549	lung:	n/a	chr9:6357095-6357108 chr9:6357095-6357108 chr9:6357095-6357106 chr9:6357097-6357108
11	CTCF	chr9:6354220-6354370	HCPEpiC	choroid plexus:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
12	CTCF	chr9:6354057-6354594	HCT-116	colon:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
13	CTCF	chr9:6354157-6354431	K562	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
14	CTCF	chr9:6354116-6354379	GM19240	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
15	CTCF	chr9:6354074-6354436	K562	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
16	CTCF	chr9:6354200-6354350	RPTEC	kidney:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
17	CTCF	chr9:6354140-6354290	WI-38	lung:	n/a	n/a
18	CTCF	chr9:6354177-6354348	MCF-7	breast:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
19	CTCF	chr9:6354220-6354370	HCFaa	heart:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
20	CTCF	chr9:6354160-6354310	Hela-S3	cervix:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
21	CTCF	chr9:6354200-6354350	SK-N-SH_RA	brain:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
22	CTCF	chr9:6354220-6354370	HepG2	liver:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
23	CTCF	chr9:6354220-6354370	HRE	kidney:	n/a	chr9:6354285-6354306 chr9:6354284-6354300 chr9:6354283-6354301
24	CTCF	chr9:6354180-6354330	GM12878	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
25	CTCF	chr9:6354180-6354330	GM06990	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
26	CTCF	chr9:6354160-6354310	A549	lung:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
27	CTCF	chr9:6354240-6354390	GM12867	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
28	CTCF	chr9:6354200-6354350	HUVEC	blood vessel:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
29	CTCF	chr9:6354240-6354390	WI-38	lung:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
30	CTCF	chr9:6354120-6354270	HAc	cerebellar:	n/a	n/a
31	CTCF	chr9:6354220-6354370	GM12875	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
32	CTCF	chr9:6353480-6353630	HVMF	connective:	n/a	n/a
33	CTCF	chr9:6354172-6354376	GM19238	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
34	CTCF	chr9:6354143-6354428	MCF-7	breast:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
35	CTCF	chr9:6354175-6354396	Fibrobl	skin:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
36	CTCF	chr9:6354200-6354350	GM12871	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
37	CTCF	chr9:6354180-6354330	GM12873	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
38	CTCF	chr9:6354200-6354350	GM12867	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
39	CTCF	chr9:6354200-6354350	HCPEpiC	choroid plexus:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
40	CTCF	chr9:6354784-6354797	GM19240	blood:	n/a	n/a
41	CTCF	chr9:6353818-6354972	A549	lung:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
42	CTCF	chr9:6334300-6334450	GM06990	blood:	n/a	n/a
43	CTCF	chr9:6354220-6354370	HAc	cerebellar:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
44	CTCF	chr9:6354200-6354350	BJ	skin:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
45	CTCF	chr9:6354154-6354420	GM12878	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
46	CTCF	chr9:6371625-6371655	LNCaP	prostate:	n/a	n/a
47	CTCF	chr9:6354200-6354350	GM12874	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
48	CTCF	chr9:6378214-6378271	GM20000	blood:	n/a	n/a
49	CTCF	chr9:6354172-6354399	GM19239	blood:	n/a	chr9:6354284-6354300 chr9:6354285-6354306 chr9:6354283-6354301
50	CTCF	chr9:6353900-6354050	HL-60	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:6328386-6328436	K562	blood:	n/a
2	chr9:6328386-6328436	AG09309	skin:	n/a
3	chr9:6328493-6328543	SAEC	small airway:	n/a
4	chr9:6328386-6328436	HCPEpiC	choroid plexus:	n/a
5	chr9:6328386-6328436	PANC-1	pancreas:	n/a
6	chr9:6328493-6328543	Jurkat	blood:	n/a
7	chr9:6328493-6328543	NT2-D1	testis:	n/a
8	chr9:6328386-6328436	HL-60	blood:	n/a
9	chr9:6328386-6328436	ECC-1	luminal epithelium:	n/a
10	chr9:6328493-6328543	AG09309	skin:	n/a
11	chr9:6328493-6328543	HPAEpiC	pulmonary alveolar:	n/a
12	chr9:6328386-6328436	GM19239	blood:	n/a
13	chr9:6328493-6328543	Caco-2	colon:	n/a
14	chr9:6328493-6328543	GM19239	blood:	n/a
15	chr9:6328493-6328543	IMR90	lung:	fetal
16	chr9:6328386-6328436	GM12892	blood:	n/a
17	chr9:6328493-6328543	U87	brain:	n/a
18	chr9:6328386-6328436	NH-A	brain:	n/a
19	chr9:6328386-6328436	LNCaP	prostate:	n/a
20	chr9:6328386-6328436	HCF	heart:	n/a
21	chr9:6328493-6328543	HMEC	breast:	n/a
22	chr9:6328493-6328543	PrEC	prostate:	n/a
23	chr9:6328386-6328436	HRPEpiC	eye:	n/a
24	chr9:6328386-6328436	HPAEpiC	pulmonary alveolar:	n/a
25	chr9:6328493-6328543	MCF-7	breast:	n/a
26	chr9:6328386-6328436	PFSK-1	brain:	n/a
27	chr9:6328493-6328543	HRCEpiC	kidney:	n/a
28	chr9:6328493-6328543	HCM	heart:	n/a
29	chr9:6328386-6328436	SK-N-SH	brain:	n/a
30	chr9:6328493-6328543	AoSMC	blood vessel:	n/a
31	chr9:6328386-6328436	HRCEpiC	kidney:	n/a
32	chr9:6328493-6328543	HL-60	blood:	n/a
33	chr9:6328493-6328543	ovcar-3	ovarian:	n/a
34	chr9:6328493-6328543	CMK	blood:	n/a
35	chr9:6328493-6328543	ECC-1	luminal epithelium:	n/a
36	chr9:6328493-6328543	AG04450	lung:	fetal
37	chr9:6328493-6328543	HCT-116	colon:	n/a
38	chr9:6328493-6328543	HEEpiC	esophagus:	n/a
39	chr9:6328386-6328436	MCF-7	breast:	n/a
40	chr9:6328493-6328543	A549	lung:	n/a
41	chr9:6328386-6328436	A549	lung:	n/a
42	chr9:6328386-6328436	Caco-2	colon:	n/a
43	chr9:6328386-6328436	T-47D	breast:	n/a
44	chr9:6328493-6328543	NHBE	bronchial:	n/a
45	chr9:6328386-6328436	HEK293	kidney:	embryo
46	chr9:6328386-6328436	NHDF-neo	bronchial:	n/a
47	chr9:6328493-6328543	H1-hESC	embryonic stem cell:	embryo
48	chr9:6328493-6328543	HRPEpiC	eye:	n/a
49	chr9:6328493-6328543	T-47D	breast:	n/a
50	chr9:6328386-6328436	HAEpiC	amniotic membrane:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:11969564..11971245-chr9:6400768..6402268,2	K562	blood:
2	chr9:6354073..6354743-chr9:6738989..6739892,3	K562	blood:
3	chr1:11968667..11972683-chr9:6399248..6402268,5	K562	blood:
4	chr9:6354241..6354767-chr9:6667295..6668097,2	K562	blood:
5	chr9:6389667..6391498-chr9:6396973..6399114,2	MCF-7	breast:
6	chr9:6054942..6055457-chr9:6353907..6354484,2	MCF-7	breast:
7	chr9:6398344..6401128-chr9:6407574..6409551,2	K562	blood:
8	chr9:6352849..6355311-chr9:6679612..6682199,2	MCF-7	breast:
9	chr9:6329167..6331675-chr9:6333759..6336639,2	K562	blood:
10	chr9:6354058..6354828-chr9:6567905..6568745,4	MCF-7	breast:
11	chr9:6354258..6354771-chr9:6567896..6568668,2	MCF-7	breast:
12	chr9:6389667..6391498-chr9:6396973..6399114,2	MCF-7	breast:
13	chr9:6329167..6331675-chr9:6333759..6336639,2	K562	blood:

Variant related genes	Relation type
TPD52L3	TF binding region
TPD52L3	CpG island
ENSG00000201801	chromatin interactions

Extended variants
information (count: 1870 )
Associated
traits (count: 103 )

Variant overlapped rSNPs/rCNVs (count:1870 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs543015868	chr9:6328244-6328245	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs116398118	chr9:6328292-6328293	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs546748538	chr9:6328299-6328300	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs528972296	chr9:6328301-6328302	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs190981957	chr9:6328307-6328308	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs559875779	chr9:6328311-6328312	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs35303419	chr9:6328342-6328343	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs151257191	chr9:6328355-6328356	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs111908711	chr9:6328357-6328358	Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs539490870	chr9:6328408-6328409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs374420240	chr9:6328421-6328422	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs571668408	chr9:6328433-6328434	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs11553814	chr9:6328440-6328441	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs537397783	chr9:6328441-6328442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs549412300	chr9:6328493-6328494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs117475693	chr9:6328504-6328505	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs141637710	chr9:6328507-6328508	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs147074821	chr9:6328511-6328512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs370187738	chr9:6328523-6328524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs369317872	chr9:6328548-6328549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs373611509	chr9:6328556-6328557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs377508099	chr9:6328562-6328563	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs10975545	chr9:6328563-6328564	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs376747813	chr9:6328592-6328593	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs143960234	chr9:6328596-6328597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs374167147	chr9:6328611-6328612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs369621175	chr9:6328624-6328625	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs373494234	chr9:6328630-6328631	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs138795326	chr9:6328643-6328644	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs142792619	chr9:6328649-6328650	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs554477691	chr9:6328673-6328674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs371715772	chr9:6328676-6328677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs377070373	chr9:6328678-6328679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs200354889	chr9:6328684-6328685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs201977309	chr9:6328686-6328687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs368800447	chr9:6328695-6328696	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs370065176	chr9:6328696-6328697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs78770668	chr9:6328698-6328699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs147413366	chr9:6328710-6328711	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs75202744	chr9:6328739-6328740	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs17853209	chr9:6328745-6328746	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs542980966	chr9:6328748-6328749	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs561333352	chr9:6328762-6328763	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs573329913	chr9:6328774-6328775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs142696829	chr9:6328796-6328797	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs77788073	chr9:6328797-6328798	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs548511287	chr9:6328811-6328812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs372625824	chr9:6328813-6328814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs139263361	chr9:6328823-6328824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs375647271	chr9:6328829-6328830	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:103)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metastatic melanoma	18483359	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	16783165	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Dyslexia	22102821	CNVD
Renal cell carcinoma	21215367	CNVD

Chromatin state (count:151 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:6328200-6328400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:6328400-6335800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr9:6329000-6329400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr9:6329000-6329600	Enhancers	GM12878-XiMat	blood
5	chr9:6329800-6332400	Enhancers	HUVEC	blood vessel
6	chr9:6330600-6332000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr9:6335800-6336400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr9:6336200-6336400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
9	chr9:6342200-6342400	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr9:6342400-6352000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr9:6342600-6342800	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr9:6342800-6343000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr9:6348000-6348400	Enhancers	HepG2	liver
14	chr9:6348600-6348800	Enhancers	GM12878-XiMat	blood
15	chr9:6351000-6355800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr9:6351400-6352800	Enhancers	Hela-S3	cervix
17	chr9:6351800-6352200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr9:6352000-6352200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr9:6352000-6352200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr9:6352000-6352200	Enhancers	HMEC	breast
21	chr9:6352000-6352400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr9:6352200-6352600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr9:6352200-6353800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr9:6352200-6354000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr9:6352400-6354000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr9:6352400-6354400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr9:6352600-6353000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr9:6352800-6353800	Weak transcription	Hela-S3	cervix
29	chr9:6353000-6353200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr9:6353200-6354000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr9:6353800-6354800	Enhancers	Hela-S3	cervix
32	chr9:6354000-6354200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr9:6354000-6354800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr9:6354000-6354800	Enhancers	Primary B cells from peripheral blood	blood
35	chr9:6354000-6357200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr9:6354000-6357200	Enhancers	Muscle Satellite Cultured Cells	--
37	chr9:6354000-6357400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr9:6354000-6357400	Enhancers	HMEC	breast
39	chr9:6354000-6357400	Enhancers	Osteobl	bone
40	chr9:6354000-6358200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr9:6354200-6354800	Enhancers	Primary B cells from cord blood	blood
42	chr9:6354200-6354800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr9:6354200-6354800	Enhancers	HUVEC	blood vessel
44	chr9:6354200-6355000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr9:6354400-6354600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr9:6354400-6356800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr9:6354400-6357200	Enhancers	NHDF-Ad	bronchial
48	chr9:6354400-6357400	Enhancers	GM12878-XiMat	blood
49	chr9:6354400-6357400	Enhancers	NHLF	lung
50	chr9:6354600-6355200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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