Variant report

Variant nsv1019228
Chromosome Location chr6:55608688-55653498
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:144 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:55608800-55622000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:55611200-55611600 Enhancers Fetal Lung lung
3 chr6:55612200-55612600 Enhancers Fetal Heart heart
4 chr6:55612600-55623000 Weak transcription Fetal Heart heart
5 chr6:55614600-55614800 ZNF genes & repeats Pancreas Pancrea
6 chr6:55616200-55616600 ZNF genes & repeats Fetal Lung lung
7 chr6:55616200-55627800 Weak transcription Fetal Brain Male brain
8 chr6:55616600-55619000 Weak transcription Fetal Lung lung
9 chr6:55617400-55619000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr6:55617800-55618600 Enhancers Pancreatic Islets Pancreatic Islet
11 chr6:55618200-55672400 Weak transcription Placenta Placenta
12 chr6:55618600-55619200 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr6:55619000-55619200 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr6:55619000-55619600 Genic enhancers Fetal Lung lung
15 chr6:55619000-55619800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:55619200-55620200 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr6:55619200-55620200 Enhancers Pancreatic Islets Pancreatic Islet
18 chr6:55619400-55619800 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr6:55619600-55619800 Enhancers Fetal Lung lung
20 chr6:55619600-55624600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr6:55619800-55621200 Weak transcription Fetal Lung lung
22 chr6:55619800-55626000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr6:55620200-55623200 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr6:55620200-55623800 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr6:55620800-55621400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:55621200-55621400 Enhancers Fetal Lung lung
27 chr6:55621400-55621600 Weak transcription Fetal Lung lung
28 chr6:55621400-55621800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr6:55621400-55624600 Enhancers Hela-S3 cervix
30 chr6:55621600-55621800 Genic enhancers Fetal Lung lung
31 chr6:55621800-55625000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr6:55621800-55626800 Strong transcription Fetal Lung lung
33 chr6:55622000-55624000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr6:55622800-55623000 Enhancers NHDF-Ad bronchial
35 chr6:55622800-55623200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr6:55622800-55624000 Enhancers NHEK skin
37 chr6:55622800-55624400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr6:55622800-55624600 Enhancers HMEC breast
39 chr6:55623000-55623200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr6:55623000-55623200 ZNF genes & repeats Fetal Heart heart
41 chr6:55623000-55623200 Flanking Active TSS NHDF-Ad bronchial
42 chr6:55623000-55623800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr6:55623000-55624000 Enhancers Osteobl bone
44 chr6:55623000-55624600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr6:55623000-55624600 Enhancers Muscle Satellite Cultured Cells --
46 chr6:55623200-55623800 Enhancers Pancreatic Islets Pancreatic Islet
47 chr6:55623200-55624600 Enhancers NHDF-Ad bronchial
48 chr6:55623200-55631400 Weak transcription Fetal Heart heart
49 chr6:55623400-55623800 Enhancers A549 lung
50 chr6:55623400-55624000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links