Variant report

Variant	nsv1019324
Chromosome Location	chr9:3436845-3502815
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1048)
CpG islands
(count:61)
Chromatin interactive
region (count:45)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1048 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:3441298-3441535	HepG2	liver:	n/a	n/a
2	ATF2	chr9:3475443-3476039	GM12878	blood:	n/a	n/a
3	ATF2	chr9:3475292-3476102	GM12878	blood:	n/a	n/a
4	ATF2	chr9:3479428-3480436	GM12878	blood:	n/a	n/a
5	ATF2	chr9:3478178-3478876	GM12878	blood:	n/a	n/a
6	ATF2	chr9:3479370-3480333	GM12878	blood:	n/a	n/a
7	ATF2	chr9:3478340-3478822	GM12878	blood:	n/a	n/a
8	ATF3	chr9:3475317-3475567	HepG2	liver:	n/a	n/a
9	ATF3	chr9:3475231-3475643	K562	blood:	n/a	n/a
10	ATF3	chr9:3475331-3475578	K562	blood:	n/a	n/a
11	BACH1	chr9:3455278-3455282	H1-hESC	embryonic stem cell:	n/a	n/a
12	BATF	chr9:3479480-3479762	GM12878	blood:	n/a	n/a
13	BATF	chr9:3475282-3475581	GM12878	blood:	n/a	chr9:3475427-3475438
14	BATF	chr9:3475305-3475599	GM12878	blood:	n/a	chr9:3475427-3475438
15	BATF	chr9:3475628-3476049	GM12878	blood:	n/a	n/a
16	BATF	chr9:3480020-3480395	GM12878	blood:	n/a	n/a
17	BCL11A	chr9:3475655-3476069	GM12878	blood:	n/a	n/a
18	BCL11A	chr9:3479574-3480056	GM12878	blood:	n/a	chr9:3479921-3479930
19	BCL11A	chr9:3475688-3476026	GM12878	blood:	n/a	n/a
20	BCL3	chr9:3475614-3476073	GM12878	blood:	n/a	n/a
21	BCLAF1	chr9:3467518-3468055	GM12878	blood:	n/a	chr9:3467803-3467812
22	BCLAF1	chr9:3475372-3476053	GM12878	blood:	n/a	n/a
23	BCLAF1	chr9:3475517-3476108	GM12878	blood:	n/a	n/a
24	BCLAF1	chr9:3441185-3441610	GM12878	blood:	n/a	n/a
25	BCLAF1	chr9:3479414-3480223	GM12878	blood:	n/a	chr9:3479921-3479930
26	BCLAF1	chr9:3473349-3473785	GM12878	blood:	n/a	n/a
27	BCLAF1	chr9:3478308-3479065	GM12878	blood:	n/a	n/a
28	BHLHE40	chr9:3475349-3475581	HepG2	liver:	n/a	n/a
29	BHLHE40	chr9:3475328-3476086	GM12878	blood:	n/a	n/a
30	BHLHE40	chr9:3467628-3467956	GM12878	blood:	n/a	n/a
31	BHLHE40	chr9:3475319-3475706	K562	blood:	n/a	n/a
32	CBX3	chr9:3477770-3478100	K562	blood:	n/a	n/a
33	CBX3	chr9:3475298-3475599	K562	blood:	n/a	n/a
34	CEBPB	chr9:3475235-3476196	GM12878	blood:	n/a	n/a
35	CEBPB	chr9:3466283-3466577	IMR90	lung:	n/a	n/a
36	CEBPB	chr9:3467468-3468111	GM12878	blood:	n/a	n/a
37	CEBPB	chr9:3502452-3503130	A549	lung:	n/a	chr9:3502457-3502470 chr9:3502459-3502470
38	CEBPB	chr9:3464214-3464434	K562	blood:	n/a	n/a
39	CEBPB	chr9:3466338-3466511	A549	lung:	n/a	n/a
40	CEBPB	chr9:3441311-3441453	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr9:3464201-3464484	IMR90	lung:	n/a	n/a
42	CHD1	chr9:3477640-3477760	GM12878	blood:	n/a	n/a
43	CHD2	chr9:3467608-3468058	GM12878	blood:	n/a	n/a
44	CHD2	chr9:3475646-3476022	GM12878	blood:	n/a	n/a
45	CREB1	chr9:3479525-3480334	GM12878	blood:	n/a	n/a
46	CTCF	chr9:3441320-3441470	HCM	heart:	n/a	n/a
47	CTCF	chr9:3467700-3467850	HCM	heart:	n/a	chr9:3467769-3467790 chr9:3467767-3467785
48	CTCF	chr9:3441340-3441490	AoAF	blood vessel:	n/a	n/a
49	CTCF	chr9:3467558-3468091	GM12878	blood:	n/a	chr9:3467769-3467790 chr9:3467767-3467785
50	CTCF	chr9:3467622-3467910	Hela-S3	cervix:	n/a	chr9:3467769-3467790 chr9:3467767-3467785

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:3441530-3441580	Hepatocyte	liver:	n/a
2	chr9:3441530-3441580	SK-N-SH_RA	brain:	n/a
3	chr9:3441530-3441580	GM12891	blood:	n/a
4	chr9:3441530-3441580	NHBE	bronchial:	n/a
5	chr9:3441530-3441580	HL-60	blood:	n/a
6	chr9:3441530-3441580	GM12892	blood:	n/a
7	chr9:3441530-3441580	Hela-S3	cervix:	n/a
8	chr9:3441530-3441580	HCM	heart:	n/a
9	chr9:3441530-3441580	SK-N-SH	brain:	n/a
10	chr9:3441530-3441580	NT2-D1	testis:	n/a
11	chr9:3441530-3441580	T-47D	breast:	n/a
12	chr9:3441530-3441580	SAEC	small airway:	n/a
13	chr9:3441530-3441580	Caco-2	colon:	n/a
14	chr9:3441530-3441580	RPTEC	kidney:	n/a
15	chr9:3441530-3441580	HRE	kidney:	n/a
16	chr9:3441530-3441580	ovcar-3	ovarian:	n/a
17	chr9:3441530-3441580	HNPCEpiC	eye:	n/a
18	chr9:3441530-3441580	HEEpiC	esophagus:	n/a
19	chr9:3441530-3441580	HMEC	breast:	n/a
20	chr9:3441530-3441580	HCPEpiC	choroid plexus:	n/a
21	chr9:3441530-3441580	SK-N-MC	brain:	n/a
22	chr9:3441530-3441580	LNCaP	prostate:	n/a
23	chr9:3441530-3441580	NB4	blood:	n/a
24	chr9:3441530-3441580	AG09309	skin:	n/a
25	chr9:3441530-3441580	AG10803	skin:	n/a
26	chr9:3441530-3441580	HRPEpiC	eye:	n/a
27	chr9:3441530-3441580	GM06990	blood:	n/a
28	chr9:3441530-3441580	Jurkat	blood:	n/a
29	chr9:3441530-3441580	CMK	blood:	n/a
30	chr9:3441530-3441580	AoSMC	blood vessel:	n/a
31	chr9:3441530-3441580	ProgFib	skin:	n/a
32	chr9:3441530-3441580	HUVEC	blood vessel:	n/a
33	chr9:3441530-3441580	PANC-1	pancreas:	n/a
34	chr9:3441530-3441580	SKMC	muscle:	n/a
35	chr9:3441530-3441580	HEK293	kidney:	embryo
36	chr9:3441530-3441580	ECC-1	luminal epithelium:	n/a
37	chr9:3441530-3441580	AG04450	lung:	fetal
38	chr9:3441530-3441580	H1-hESC	embryonic stem cell:	embryo
39	chr9:3441530-3441580	NHDF-neo	bronchial:	n/a
40	chr9:3441530-3441580	HPAEpiC	pulmonary alveolar:	n/a
41	chr9:3441530-3441580	HIPEpiC	eye:	n/a
42	chr9:3441530-3441580	K562	blood:	n/a
43	chr9:3441530-3441580	MCF10A-Er-Src	breast:	n/a
44	chr9:3441530-3441580	HCT-116	colon:	n/a
45	chr9:3441530-3441580	PFSK-1	brain:	n/a
46	chr9:3441530-3441580	HRCEpiC	kidney:	n/a
47	chr9:3441530-3441580	U87	brain:	n/a
48	chr9:3441530-3441580	A549	lung:	n/a
49	chr9:3441530-3441580	HAEpiC	amniotic membrane:	n/a
50	chr9:3441530-3441580	GM19239	blood:	n/a

(count:45 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:3462529..3469298-chr9:3525044..3529022,8	MCF-7	breast:
2	chr9:3474071..3478012-chr9:3525066..3526947,3	K562	blood:
3	chr9:3489743..3491847-chr9:3522486..3524735,2	K562	blood:
4	chr9:3498254..3500362-chr9:3527205..3528736,2	K562	blood:
5	chr9:3467888..3469865-chr9:4296792..4299430,2	MCF-7	breast:
6	chr9:3240483..3241298-chr9:3440976..3441796,6	MCF-7	breast:
7	chr9:3444697..3447599-chr9:3525875..3528087,2	MCF-7	breast:
8	chr9:3478739..3481374-chr9:3498869..3500820,2	MCF-7	breast:
9	chr9:3493140..3494788-chr9:3496837..3499206,2	K562	blood:
10	chr9:3450776..3452796-chr9:3525242..3527139,2	MCF-7	breast:
11	chr9:3491268..3494910-chr9:3525417..3527620,3	MCF-7	breast:
12	chr9:3497780..3499700-chr9:3524560..3526876,2	K562	blood:
13	chr9:3488422..3492745-chr9:3526119..3529756,3	K562	blood:
14	chr9:3466442..3469407-chr9:3524530..3526691,2	K562	blood:
15	chr9:3465058..3467363-chr9:3472646..3474184,2	K562	blood:
16	chr9:3460990..3463630-chr9:3491395..3493289,2	K562	blood:
17	chr9:3472148..3476426-chr9:3525120..3528323,5	MCF-7	breast:
18	chr9:3465058..3467363-chr9:3472646..3474184,2	K562	blood:
19	chr9:3467327..3468207-chr9:3521230..3521983,2	MCF-7	breast:
20	chr9:3495458..3497256-chr9:3517334..3519565,2	K562	blood:
21	chr9:3479015..3481934-chr9:3484671..3486572,2	K562	blood:
22	chr9:3453765..3455686-chr9:3457220..3458884,2	K562	blood:
23	chr9:3481303..3484512-chr9:3524609..3529415,5	MCF-7	breast:
24	chr9:3493140..3494788-chr9:3496837..3499206,2	K562	blood:
25	chr9:3501077..3503324-chr9:3523015..3525744,2	MCF-7	breast:
26	chr9:3460990..3463630-chr9:3491395..3493289,2	K562	blood:
27	chr9:3500140..3503117-chr9:3505256..3509401,4	K562	blood:
28	chr9:3472046..3474328-chr9:3525232..3527655,2	K562	blood:
29	chr9:3477335..3480982-chr9:3525320..3527937,6	MCF-7	breast:
30	chr9:3470655..3472991-chr9:3531327..3534236,2	K562	blood:
31	chr9:3489811..3492188-chr9:3524629..3527115,2	MCF-7	breast:
32	chr9:3495106..3497016-chr9:3524367..3527205,3	MCF-7	breast:
33	chr9:3462690..3464398-chr9:3511341..3512985,2	K562	blood:
34	chr9:3474241..3476726-chr9:3530164..3531864,2	K562	blood:
35	chr9:3478739..3481374-chr9:3498869..3500820,2	MCF-7	breast:
36	chr9:3486226..3487734-chr9:3489487..3491455,2	K562	blood:
37	chr9:3479015..3481934-chr9:3484671..3486572,2	K562	blood:
38	chr9:3486226..3487734-chr9:3489487..3491455,2	K562	blood:
39	chr9:3474527..3477268-chr9:3526312..3529776,3	K562	blood:
40	chr9:3453765..3455686-chr9:3457220..3458884,2	K562	blood:
41	chr9:3461663..3464190-chr9:3509726..3512985,3	K562	blood:
42	chr9:3498806..3500362-chr9:3527236..3529774,2	K562	blood:
43	chr9:3478923..3481537-chr9:3524337..3526099,2	K562	blood:
44	chr9:3440838..3441394-chr9:3513388..3514228,2	MCF-7	breast:
45	chr20:47428621..47429287-chr9:3440592..3441337,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KCNV2-8	chr9:3479874-3481237	NONHSAT130020
2	lnc-KCNV2-7	chr9:3469874-3471237	ucscGeneNc_uc003zhu_2

No data

Variant related genes	Relation type
RFX3	TF binding region
ENSG00000203286	TF binding region
RFX3	CpG island
ENSG00000203286	CpG island
ENSG00000107249	chromatin interactions
ENSG00000232104	chromatin interactions
ENSG00000080298	chromatin interactions
ENSG00000228322	chromatin interactions

Extended variants
information (count: 2809 )
Associated
traits (count: 105 )

Variant overlapped rSNPs/rCNVs (count:2809 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs79511599	chr9:3436900-3436901	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs535386217	chr9:3436902-3436903	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs199537724	chr9:3436945-3436946	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs200653841	chr9:3436949-3436950	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs555567040	chr9:3436950-3436951	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs548507082	chr9:3436951-3436952	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs375279745	chr9:3436952-3436953	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs35142574	chr9:3436959-3436960	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs556986981	chr9:3436980-3436981	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs10972037	chr9:3437017-3437018	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs114415363	chr9:3437193-3437194	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs111816906	chr9:3437207-3437208	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs573509823	chr9:3437224-3437225	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs547795928	chr9:3437255-3437256	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs542143230	chr9:3437299-3437300	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs562323784	chr9:3437301-3437302	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs541800296	chr9:3437313-3437314	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs550699719	chr9:3437400-3437401	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs376620657	chr9:3437421-3437422	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs139785059	chr9:3437425-3437426	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs187646404	chr9:3437442-3437443	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs192552671	chr9:3437448-3437449	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs367811013	chr9:3437461-3437462	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs376289278	chr9:3437463-3437464	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs548975957	chr9:3437554-3437555	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs569033794	chr9:3437559-3437560	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs372673090	chr9:3437565-3437566	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs537606858	chr9:3437574-3437575	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs115051653	chr9:3437585-3437586	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs12115798	chr9:3437594-3437595	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs539525799	chr9:3437615-3437616	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs539547066	chr9:3437628-3437629	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs556658296	chr9:3437653-3437654	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs573120911	chr9:3437664-3437665	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs576466195	chr9:3437701-3437702	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs184789283	chr9:3437731-3437732	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs368030133	chr9:3437793-3437794	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs145207700	chr9:3437804-3437805	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs73639894	chr9:3437807-3437808	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs544862777	chr9:3437811-3437812	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs76817186	chr9:3437836-3437837	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs533091828	chr9:3437844-3437845	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs116140550	chr9:3437866-3437867	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs560113985	chr9:3437934-3437935	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs528833426	chr9:3437938-3437939	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs59777838	chr9:3437942-3437943	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs371853307	chr9:3437956-3437957	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs549267994	chr9:3437999-3438000	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs568850427	chr9:3438122-3438123	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs531497824	chr9:3438165-3438166	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:105)

Disease	PMID	Source
Gastric cancer	16715143	CNVD
Glioblastoma multiforme	22286061	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Myelofibrosis	22110671	CNVD
Developmental delay	21373258	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Autism	20808228	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD

Chromatin state (count:867 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:3398800-3437200	Weak transcription	Primary B cells from cord blood	blood
2	chr9:3419000-3437000	Weak transcription	Brain Substantia Nigra	brain
3	chr9:3425600-3453200	Weak transcription	Primary hematopoietic stem cells	blood
4	chr9:3426600-3444600	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr9:3426800-3437000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr9:3426800-3446200	Weak transcription	Left Ventricle	heart
7	chr9:3428200-3438200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr9:3428200-3443200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr9:3429800-3443800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr9:3431800-3441400	Weak transcription	Primary B cells from peripheral blood	blood
11	chr9:3432400-3467800	Weak transcription	GM12878-XiMat	blood
12	chr9:3432600-3437200	Weak transcription	Brain Hippocampus Middle	brain
13	chr9:3432600-3460600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
14	chr9:3433600-3437800	Enhancers	Pancreatic Islets	Pancreatic Islet
15	chr9:3434400-3437200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr9:3435000-3437600	Weak transcription	Brain Angular Gyrus	brain
17	chr9:3435000-3437800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr9:3435000-3473200	Weak transcription	Primary T cells from cord blood	blood
19	chr9:3435400-3438200	Enhancers	Brain Germinal Matrix	brain
20	chr9:3435600-3437000	Weak transcription	Primary T helper cells fromperipheralblood	blood
21	chr9:3435800-3444000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr9:3436200-3437400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr9:3436200-3437400	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr9:3436600-3437000	Enhancers	Colon Smooth Muscle	Colon
25	chr9:3436600-3437600	Enhancers	Fetal Heart	heart
26	chr9:3436600-3437800	Enhancers	Cortex derived primary cultured neurospheres	brain
27	chr9:3436600-3437800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr9:3436600-3439000	Weak transcription	HUVEC	blood vessel
29	chr9:3436800-3437000	Enhancers	Psoas Muscle	Psoas
30	chr9:3436800-3437600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr9:3437000-3437400	Weak transcription	Psoas Muscle	Psoas
32	chr9:3437000-3437600	Enhancers	Brain Substantia Nigra	brain
33	chr9:3437000-3437800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr9:3437200-3437600	Enhancers	Brain Hippocampus Middle	brain
35	chr9:3437200-3437800	Enhancers	Brain Anterior Caudate	brain
36	chr9:3437200-3438400	Strong transcription	Primary B cells from cord blood	blood
37	chr9:3437400-3437800	Enhancers	Psoas Muscle	Psoas
38	chr9:3437800-3438400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr9:3437800-3446000	Weak transcription	Pancreatic Islets	Pancreatic Islet
40	chr9:3438400-3443200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr9:3438400-3472800	Weak transcription	Primary B cells from cord blood	blood
42	chr9:3441400-3441600	Enhancers	Primary B cells from peripheral blood	blood
43	chr9:3443200-3443600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr9:3443200-3444800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr9:3443600-3446400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr9:3443800-3444800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr9:3443800-3445000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr9:3444000-3445000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
49	chr9:3444600-3444800	Enhancers	Sigmoid Colon	Sigmoid Colon
50	chr9:3444800-3446600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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