Variant report

Variant	nsv1019974
Chromosome Location	chr5:99968378-100010033
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:336)
CpG islands
(count:123)
Chromatin interactive
region (count:29)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:336 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:99977601-99977922	K562	blood:	n/a	n/a
2	ARID3A	chr5:99982017-99982085	K562	blood:	n/a	n/a
3	ARID3A	chr5:99990630-99990941	K562	blood:	n/a	n/a
4	ARID3A	chr5:99983489-99983958	K562	blood:	n/a	n/a
5	ATF1	chr5:99990201-99990376	K562	blood:	n/a	n/a
6	BACH1	chr5:100000078-100000111	K562	blood:	n/a	n/a
7	BHLHE40	chr5:99990719-99990919	K562	blood:	n/a	n/a
8	BHLHE40	chr5:99978352-99978517	K562	blood:	n/a	n/a
9	BHLHE40	chr5:99983105-99983921	K562	blood:	n/a	n/a
10	BHLHE40	chr5:99980080-99980171	HepG2	liver:	n/a	n/a
11	BHLHE40	chr5:99970745-99970938	GM12878	blood:	n/a	n/a
12	BRCA1	chr5:99983490-99983559	GM12878	blood:	n/a	n/a
13	BRCA1	chr5:99981848-99981913	GM12878	blood:	n/a	n/a
14	CBX3	chr5:99977588-99977872	K562	blood:	n/a	n/a
15	CCNT2	chr5:99977656-99977879	K562	blood:	n/a	n/a
16	CCNT2	chr5:99990726-99991000	K562	blood:	n/a	chr5:99990744-99990764
17	CEBPB	chr5:99980650-99981422	A549	lung:	n/a	chr5:99981235-99981246
18	CEBPB	chr5:99983312-99983748	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr5:100002822-100003462	Hela-S3	cervix:	n/a	chr5:100003132-100003145 chr5:100003133-100003144 chr5:100003132-100003143
20	CEBPB	chr5:100002939-100003398	IMR90	lung:	n/a	chr5:100003132-100003145 chr5:100003133-100003144 chr5:100003132-100003143
21	CEBPB	chr5:99980697-99981417	K562	blood:	n/a	chr5:99981235-99981246
22	CEBPB	chr5:99983195-99983759	ECC-1	luminal epithelium:	n/a	n/a
23	CEBPB	chr5:100002888-100003406	HCT-116	colon:	n/a	chr5:100003132-100003145 chr5:100003133-100003144 chr5:100003132-100003143
24	CEBPB	chr5:99979129-99979560	ECC-1	luminal epithelium:	n/a	n/a
25	CEBPB	chr5:100002966-100003372	MCF-7	breast:	n/a	chr5:100003132-100003145 chr5:100003133-100003144 chr5:100003132-100003143
26	CEBPB	chr5:100002888-100003324	K562	blood:	n/a	chr5:100003132-100003145 chr5:100003133-100003144 chr5:100003132-100003143
27	CEBPB	chr5:99979850-99980320	ECC-1	luminal epithelium:	n/a	n/a
28	CEBPB	chr5:99983151-99983762	MCF-7	breast:	n/a	n/a
29	CEBPB	chr5:100002876-100003404	A549	lung:	n/a	chr5:100003132-100003145 chr5:100003133-100003144 chr5:100003132-100003143
30	CEBPB	chr5:99970744-99971140	Hela-S3	cervix:	n/a	n/a
31	CEBPB	chr5:99979154-99979484	H1-hESC	embryonic stem cell:	n/a	n/a
32	CEBPB	chr5:99983315-99983876	K562	blood:	n/a	n/a
33	CEBPB	chr5:99980653-99981420	HepG2	liver:	n/a	chr5:99981235-99981246
34	CEBPB	chr5:99979829-99980250	ECC-1	luminal epithelium:	n/a	n/a
35	CEBPB	chr5:100002957-100003342	HepG2	liver:	n/a	chr5:100003132-100003145 chr5:100003133-100003144 chr5:100003132-100003143
36	CEBPB	chr5:100003105-100003224	H1-hESC	embryonic stem cell:	n/a	chr5:100003132-100003145 chr5:100003133-100003144 chr5:100003132-100003143
37	CEBPD	chr5:99977656-99978028	K562	blood:	n/a	n/a
38	CEBPD	chr5:99990624-99990996	K562	blood:	n/a	n/a
39	CEBPD	chr5:99977620-99977943	K562	blood:	n/a	n/a
40	CHD1	chr5:99978477-99978492	GM12878	blood:	n/a	n/a
41	CTCF	chr5:99977714-99977779	MCF-7	breast:	n/a	n/a
42	CTCF	chr5:99977644-99977804	MCF-7	breast:	n/a	n/a
43	CTCF	chr5:99977639-99977813	K562	blood:	n/a	n/a
44	CTCF	chr5:99992493-99992530	GM10266	blood:	n/a	n/a
45	CTCF	chr5:99985079-99985182	GM10248	blood:	n/a	chr5:99985158-99985165
46	CTCF	chr5:99992854-99992942	H1-hESC	embryonic stem cell:	n/a	n/a
47	CTCF	chr5:99977563-99977898	K562	blood:	n/a	n/a
48	CTCF	chr5:99985578-99985642	Kidney_OC	kidney:	n/a	n/a
49	CUX1	chr5:99990821-99990898	K562	blood:	n/a	n/a
50	CUX1	chr5:99970605-99970757	GM12878	blood:	n/a	n/a

(count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:99979316-99979366	SK-N-SH_RA	brain:	n/a
2	chr5:99979316-99979366	SK-N-SH_RA	brain:	n/a
3	chr5:99993323-99993373	SK-N-MC	brain:	n/a
4	chr5:99979316-99979366	AG04449	skin:	fetal
5	chr5:99993323-99993373	AG09319	gingival:	n/a
6	chr5:99993323-99993373	HEK293	kidney:	embryo
7	chr5:99993323-99993373	HepG2	liver:	n/a
8	chr5:99979316-99979366	CMK	blood:	n/a
9	chr5:99979316-99979366	HEK293	kidney:	embryo
10	chr5:99979316-99979366	K562	blood:	n/a
11	chr5:99979316-99979366	MCF-7	breast:	n/a
12	chr5:99993323-99993373	K562	blood:	n/a
13	chr5:99979316-99979366	HRE	kidney:	n/a
14	chr5:99993323-99993373	GM12892	blood:	n/a
15	chr5:99979316-99979366	SK-N-SH	brain:	n/a
16	chr5:99979316-99979366	HCT-116	colon:	n/a
17	chr5:99993323-99993373	NH-A	brain:	n/a
18	chr5:99979316-99979366	SAEC	small airway:	n/a
19	chr5:99993323-99993373	HRE	kidney:	n/a
20	chr5:99993323-99993373	PrEC	prostate:	n/a
21	chr5:99993323-99993373	GM19239	blood:	n/a
22	chr5:99979316-99979366	AG04450	lung:	fetal
23	chr5:99979316-99979366	AoSMC	blood vessel:	n/a
24	chr5:99979316-99979366	GM12891	blood:	n/a
25	chr5:99993323-99993373	HRPEpiC	eye:	n/a
26	chr5:99979316-99979366	H1-hESC	embryonic stem cell:	embryo
27	chr5:99993323-99993373	NT2-D1	testis:	n/a
28	chr5:99979316-99979366	HMEC	breast:	n/a
29	chr5:99993323-99993373	AG04449	skin:	fetal
30	chr5:99993323-99993373	IMR90	lung:	fetal
31	chr5:99979316-99979366	IMR90	lung:	fetal
32	chr5:99979316-99979366	HEEpiC	esophagus:	n/a
33	chr5:99993323-99993373	HAEpiC	amniotic membrane:	n/a
34	chr5:99979316-99979366	SKMC	muscle:	n/a
35	chr5:99979316-99979366	BJ	skin:	n/a
36	chr5:99979316-99979366	GM19239	blood:	n/a
37	chr5:99979316-99979366	NT2-D1	testis:	n/a
38	chr5:99979316-99979366	NHDF-neo	bronchial:	n/a
39	chr5:99979316-99979366	T-47D	breast:	n/a
40	chr5:99993323-99993373	NB4	blood:	n/a
41	chr5:99993323-99993373	HL-60	blood:	n/a
42	chr5:99993323-99993373	HEEpiC	esophagus:	n/a
43	chr5:99993323-99993373	HCF	heart:	n/a
44	chr5:99979316-99979366	Jurkat	blood:	n/a
45	chr5:99979316-99979366	ovcar-3	ovarian:	n/a
46	chr5:99993323-99993373	AG10803	skin:	n/a
47	chr5:99979316-99979366	HL-60	blood:	n/a
48	chr5:99979316-99979366	HCM	heart:	n/a
49	chr5:99993323-99993373	SK-N-SH	brain:	n/a
50	chr5:99993323-99993373	HIPEpiC	eye:	n/a

(count:29 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:99983045..99983930-chr5:100117214..100117742,2	MCF-7	breast:
2	chr5:99979324..99981672-chr5:99983886..99985398,2	K562	blood:
3	chr5:99978017..99980273-chr5:99982713..99984242,2	MCF-7	breast:
4	chr5:99994840..99996773-chr5:99998173..100000130,2	K562	blood:
5	chr5:99989812..99991852-chr5:99993776..99996637,2	K562	blood:
6	chr5:99969436..99971759-chr5:99981835..99984130,2	MCF-7	breast:
7	chr5:99975585..99977874-chr5:99980709..99983188,3	K562	blood:
8	chr5:99982908..99983980-chr5:100090394..100091716,11	MCF-7	breast:
9	chr5:99982875..99983980-chr5:100090231..100091716,20	MCF-7	breast:
10	chr5:99994840..99996773-chr5:99998173..100000130,2	K562	blood:
11	chr5:99983058..99983589-chr5:100699944..100700904,2	MCF-7	breast:
12	chr5:99975585..99977874-chr5:99980709..99983188,3	K562	blood:
13	chr5:99968617..99971336-chr5:99974828..99976431,2	K562	blood:
14	chr5:99989812..99991852-chr5:99993776..99996637,2	K562	blood:
15	chr5:99984054..99985811-chr5:99989132..99991041,2	K562	blood:
16	chr5:99979051..99981832-chr5:99981912..99985691,4	MCF-7	breast:
17	chr5:99979324..99981672-chr5:99983886..99985398,2	K562	blood:
18	chr5:99983166..99984736-chr5:100011479..100013209,2	MCF-7	breast:
19	chr5:99979051..99981832-chr5:99981912..99985691,4	MCF-7	breast:
20	chr5:99983062..99983901-chr5:100090730..100091412,3	MCF-7	breast:
21	chr5:99983206..99984911-chr8:101906981..101908614,2	MCF-7	breast:
22	chr5:99969436..99971759-chr5:99981835..99984130,2	MCF-7	breast:
23	chr5:99968617..99971336-chr5:99974828..99976431,2	K562	blood:
24	chr5:99984054..99985811-chr5:99989132..99991041,2	K562	blood:
25	chr5:25503170..25504042-chr5:99982844..99983480,2	MCF-7	breast:
26	chr5:99978017..99980273-chr5:99982713..99984242,2	MCF-7	breast:
27	chr5:99993129..99995264-chr5:100001992..100004177,2	K562	blood:
28	chr5:99978477..99981448-chr5:99989522..99992251,2	MCF-7	breast:
29	chr5:99978477..99981448-chr5:99989522..99992251,2	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ST8SIA4-2	chr5:99993523-99993674	XLOC_004939
2	lnc-ST8SIA4-2	chr5:99991144-99991208	XLOC_004939
3	lnc-ST8SIA4-2	chr5:99992117-99992230	XLOC_004939
4	lnc-ST8SIA4-2	chr5:99993523-99993674	XLOC_004939
5	lnc-ST8SIA4-2	chr5:99991144-99991179	XLOC_004939
6	lnc-ST8SIA4-2	chr5:99989816-99990096	XLOC_004939
7	lnc-ST8SIA4-2	chr5:99989792-99990096	XLOC_004939

No data

Variant related genes	Relation type
ENSG00000250806	TF binding region
ENSG00000250806	CpG island
ENSG00000212994	chromatin interactions
ENSG00000250806	chromatin interactions
RBFOX2	miRNA target sites

Extended variants
information (count: 1189 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:1189 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs572758023	chr5:99971105-99971106	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs10440751	chr5:99971110-99971111	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs114808962	chr5:99971117-99971118	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs545460691	chr5:99971134-99971135	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs13182963	chr5:99971161-99971162	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs141358854	chr5:99971172-99971173	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs113234788	chr5:99972833-99972834	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs533704435	chr5:99972936-99972937	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs151030063	chr5:99973037-99973038	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs77489146	chr5:99973104-99973105	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs570197160	chr5:99973133-99973134	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs554413438	chr5:99973249-99973250	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs140953909	chr5:99973314-99973315	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs549051857	chr5:99973330-99973331	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs34365747	chr5:99973367-99973368	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs149775566	chr5:99973374-99973375	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs146807579	chr5:99973382-99973383	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs140611555	chr5:99973383-99973384	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs144734518	chr5:99973389-99973390	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs115031495	chr5:99973404-99973405	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs556998796	chr5:99973405-99973406	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs73776605	chr5:99973412-99973413	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs181301958	chr5:99973445-99973446	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs146738018	chr5:99973457-99973458	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs148897248	chr5:99973492-99973493	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs143621025	chr5:99973498-99973499	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs183619829	chr5:99973499-99973500	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs188320411	chr5:99973515-99973516	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs539872220	chr5:99973520-99973521	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs113486144	chr5:99973527-99973528	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs553199334	chr5:99973597-99973598	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs148064790	chr5:99973638-99973639	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs76245639	chr5:99973669-99973670	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs35325336	chr5:99973677-99973678	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs32284	chr5:99973740-99973741	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs373754038	chr5:99973747-99973748	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs181760514	chr5:99973757-99973758	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs555439066	chr5:99973775-99973776	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs141614828	chr5:99973787-99973788	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs145773430	chr5:99973836-99973837	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs573773752	chr5:99973837-99973838	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs544371254	chr5:99973848-99973849	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs367792273	chr5:99973859-99973860	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs542466699	chr5:99973868-99973869	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs571197357	chr5:99973869-99973870	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs556298263	chr5:99973879-99973880	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs34991842	chr5:99973880-99973881	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs372010515	chr5:99973919-99973920	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs186276213	chr5:99973980-99973981	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs556075980	chr5:99973988-99973989	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Merkel cell carcinoma	19020549	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Testicular cancer	18059402	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16573809	CNVD
Renal cell carcinoma	18194544	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
abnormal development	18461090	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	16774939	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Multiple myeloma	17550852	CNVD
Glioblastoma multiforme	22286061	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Ovarian cancer	21720365	CNVD
Prostate cancer	16461572	CNVD
Neurocytoma	17123091	CNVD
Salivary gland tumor	18059337	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:210 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:99971000-99971200	Enhancers	GM12878-XiMat	blood
2	chr5:99972800-99974200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr5:99973000-99973400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:99973000-99973400	Enhancers	Fetal Lung	lung
5	chr5:99973400-99978400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr5:99976800-99978600	Enhancers	K562	blood
7	chr5:99977600-99977800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr5:99977600-99978000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr5:99977600-99978000	Enhancers	Placenta	Placenta
10	chr5:99977600-99978200	Enhancers	Placenta Amnion	Placenta Amnion
11	chr5:99977800-99978000	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr5:99977800-99978400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr5:99977800-99979200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr5:99977800-99980000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr5:99978000-99979600	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr5:99978000-99980200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr5:99978000-99983000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr5:99978000-99983200	Weak transcription	Placenta	Placenta
19	chr5:99978200-99979200	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr5:99978200-99979400	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr5:99978400-99980200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr5:99978400-99980400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr5:99978400-99983000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr5:99978600-99978800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr5:99978600-99979800	Weak transcription	K562	blood
26	chr5:99979000-99979400	Enhancers	Brain Angular Gyrus	brain
27	chr5:99979000-99979600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr5:99979000-99980000	Enhancers	HUES64 Cell Line	embryonic stem cell
29	chr5:99979000-99980000	Enhancers	Brain Germinal Matrix	brain
30	chr5:99979000-99980200	Enhancers	iPS-20b Cell Line	embryonic stem cell
31	chr5:99979000-99980200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
32	chr5:99979000-99980200	Enhancers	Cortex derived primary cultured neurospheres	brain
33	chr5:99979000-99980200	Enhancers	HUVEC	blood vessel
34	chr5:99979000-99980200	Enhancers	NH-A	brain
35	chr5:99979000-99980400	Enhancers	HUES48 Cell Line	embryonic stem cell
36	chr5:99979200-99979400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr5:99979200-99979400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr5:99979200-99980000	Enhancers	HMEC	breast
39	chr5:99979200-99980200	Enhancers	H1 Cell Line	embryonic stem cell
40	chr5:99979200-99980200	Enhancers	HUES6 Cell Line	embryonic stem cell
41	chr5:99979200-99980200	Enhancers	iPS-15b Cell Line	embryonic stem cell
42	chr5:99979200-99980200	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr5:99979200-99980200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr5:99979200-99980200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr5:99979200-99980200	Enhancers	Fetal Kidney	kidney
46	chr5:99979400-99979800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr5:99979400-99980000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr5:99979400-99980200	Enhancers	Placenta Amnion	Placenta Amnion
49	chr5:99979400-99983200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr5:99979600-99980000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links