Variant report

Variant	nsv1020543
Chromosome Location	chr7:13851470-14021121
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1377)
CpG islands
(count:244)
Chromatin interactive
region (count:91)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1377 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:13889765-13890070	K562	blood:	n/a	n/a
2	ARID3A	chr7:14019807-14021691	K562	blood:	n/a	chr7:14020786-14020802 chr7:14020787-14020803
3	ARID3A	chr7:13915440-13915557	K562	blood:	n/a	n/a
4	ARID3A	chr7:13959750-13960140	K562	blood:	n/a	n/a
5	ATF1	chr7:13987729-13988052	K562	blood:	n/a	n/a
6	ATF1	chr7:13862322-13862554	K562	blood:	n/a	n/a
7	ATF1	chr7:13959834-13960225	K562	blood:	n/a	n/a
8	ATF1	chr7:13889729-13890161	K562	blood:	n/a	n/a
9	ATF1	chr7:13900658-13900844	K562	blood:	n/a	n/a
10	ATF1	chr7:14020698-14021136	K562	blood:	n/a	n/a
11	ATF1	chr7:13934044-13934292	K562	blood:	n/a	n/a
12	ATF1	chr7:14019904-14020081	K562	blood:	n/a	n/a
13	ATF3	chr7:14020788-14020993	K562	blood:	n/a	n/a
14	ATF3	chr7:14020590-14021036	K562	blood:	n/a	n/a
15	ATF3	chr7:13889705-13890029	K562	blood:	n/a	n/a
16	BACH1	chr7:13873923-13874075	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr7:14020708-14021014	H1-hESC	embryonic stem cell:	n/a	chr7:14020850-14020864
18	BACH1	chr7:13889847-13890003	H1-hESC	embryonic stem cell:	n/a	chr7:13889889-13889903
19	BCLAF1	chr7:14020709-14021202	K562	blood:	n/a	chr7:14020853-14020862 chr7:14020852-14020861
20	BHLHE40	chr7:13959838-13960065	K562	blood:	n/a	n/a
21	BHLHE40	chr7:13889782-13890158	K562	blood:	n/a	n/a
22	BHLHE40	chr7:14020621-14021121	K562	blood:	n/a	n/a
23	BHLHE40	chr7:13915327-13915479	K562	blood:	n/a	n/a
24	BHLHE40	chr7:13987491-13987899	K562	blood:	n/a	n/a
25	BHLHE40	chr7:13972912-13973017	K562	blood:	n/a	n/a
26	BRCA1	chr7:13959665-13960170	Hela-S3	cervix:	n/a	n/a
27	CBX3	chr7:13919496-13920313	HCT-116	colon:	n/a	n/a
28	CBX3	chr7:13959551-13960396	HCT-116	colon:	n/a	n/a
29	CBX3	chr7:13889637-13890195	K562	blood:	n/a	n/a
30	CBX3	chr7:13948217-13948986	HCT-116	colon:	n/a	n/a
31	CBX3	chr7:13889630-13890509	HCT-116	colon:	n/a	n/a
32	CBX3	chr7:13919485-13920390	HCT-116	colon:	n/a	n/a
33	CBX3	chr7:14020686-14021294	HCT-116	colon:	n/a	n/a
34	CBX3	chr7:13889571-13890520	HCT-116	colon:	n/a	n/a
35	CBX3	chr7:13889755-13890146	K562	blood:	n/a	n/a
36	CBX3	chr7:13959648-13960390	HCT-116	colon:	n/a	n/a
37	CCNT2	chr7:13945243-13945446	K562	blood:	n/a	n/a
38	CCNT2	chr7:14019439-14019595	K562	blood:	n/a	n/a
39	CCNT2	chr7:13889753-13890143	K562	blood:	n/a	n/a
40	CCNT2	chr7:14020845-14021045	K562	blood:	n/a	n/a
41	CEBPB	chr7:13880992-13881274	H1-hESC	embryonic stem cell:	n/a	chr7:13881124-13881135
42	CEBPB	chr7:13943774-13943999	K562	blood:	n/a	chr7:13943906-13943918 chr7:13943878-13943889 chr7:13943876-13943889 chr7:13943876-13943887 chr7:13943876-13943889 chr7:13943878-13943887 chr7:13943878-13943887 chr7:13943878-13943889 chr7:13943878-13943887 chr7:13943878-13943887
43	CEBPB	chr7:13932728-13932820	A549	lung:	n/a	n/a
44	CEBPB	chr7:13869741-13869988	A549	lung:	n/a	chr7:13869838-13869849
45	CEBPB	chr7:14019756-14020094	K562	blood:	n/a	chr7:14019938-14019949
46	CEBPB	chr7:14020654-14021116	K562	blood:	n/a	n/a
47	CEBPB	chr7:13869718-13870004	HepG2	liver:	n/a	chr7:13869838-13869849
48	CEBPB	chr7:13943706-13944047	HepG2	liver:	n/a	chr7:13943906-13943918 chr7:13943878-13943889 chr7:13943876-13943889 chr7:13943876-13943887 chr7:13943876-13943889 chr7:13943878-13943887 chr7:13943878-13943887 chr7:13943878-13943889 chr7:13943878-13943887 chr7:13943878-13943887
49	CEBPB	chr7:13900136-13900404	K562	blood:	n/a	chr7:13900271-13900282 chr7:13900271-13900284 chr7:13900271-13900284
50	CEBPB	chr7:14017975-14018315	IMR90	lung:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:13960140-13960190	ECC-1	luminal epithelium:	n/a
2	chr7:13985664-13985714	NH-A	brain:	n/a
3	chr7:13889871-13889921	H1-hESC	embryonic stem cell:	embryo
4	chr7:13960140-13960190	SKMC	muscle:	n/a
5	chr7:13935467-13935517	HRCEpiC	kidney:	n/a
6	chr7:13889871-13889921	CMK	blood:	n/a
7	chr7:13889871-13889921	HIPEpiC	eye:	n/a
8	chr7:13960140-13960190	AG09309	skin:	n/a
9	chr7:13889871-13889921	SAEC	small airway:	n/a
10	chr7:13935467-13935517	HRE	kidney:	n/a
11	chr7:13985664-13985714	Caco-2	colon:	n/a
12	chr7:13935467-13935517	GM19239	blood:	n/a
13	chr7:13889871-13889921	HCM	heart:	n/a
14	chr7:13889871-13889921	AG10803	skin:	n/a
15	chr7:13985664-13985714	SKMC	muscle:	n/a
16	chr7:13985664-13985714	MCF-7	breast:	n/a
17	chr7:13960140-13960190	A549	lung:	n/a
18	chr7:13960140-13960190	CMK	blood:	n/a
19	chr7:13889871-13889921	NH-A	brain:	n/a
20	chr7:13935467-13935517	RPTEC	kidney:	n/a
21	chr7:13985664-13985714	AG10803	skin:	n/a
22	chr7:13889871-13889921	HCT-116	colon:	n/a
23	chr7:13960140-13960190	SK-N-SH	brain:	n/a
24	chr7:13960140-13960190	PrEC	prostate:	n/a
25	chr7:13935467-13935517	HAEpiC	amniotic membrane:	n/a
26	chr7:13985664-13985714	NHBE	bronchial:	n/a
27	chr7:13935467-13935517	IMR90	lung:	fetal
28	chr7:13935467-13935517	SAEC	small airway:	n/a
29	chr7:13935467-13935517	GM12891	blood:	n/a
30	chr7:13889871-13889921	HRPEpiC	eye:	n/a
31	chr7:13985664-13985714	AoSMC	blood vessel:	n/a
32	chr7:13985664-13985714	U87	brain:	n/a
33	chr7:13935467-13935517	ECC-1	luminal epithelium:	n/a
34	chr7:13985664-13985714	SK-N-SH	brain:	n/a
35	chr7:13889871-13889921	HCPEpiC	choroid plexus:	n/a
36	chr7:13985664-13985714	Hepatocyte	liver:	n/a
37	chr7:13985664-13985714	GM12891	blood:	n/a
38	chr7:13935467-13935517	HEK293	kidney:	embryo
39	chr7:13935467-13935517	CMK	blood:	n/a
40	chr7:13935467-13935517	HRPEpiC	eye:	n/a
41	chr7:13960140-13960190	GM06990	blood:	n/a
42	chr7:13935467-13935517	HPAEpiC	pulmonary alveolar:	n/a
43	chr7:13960140-13960190	AoSMC	blood vessel:	n/a
44	chr7:13960140-13960190	HCF	heart:	n/a
45	chr7:13935467-13935517	K562	blood:	n/a
46	chr7:13935467-13935517	HEEpiC	esophagus:	n/a
47	chr7:13889871-13889921	HMEC	breast:	n/a
48	chr7:13889871-13889921	GM12878	blood:	n/a
49	chr7:13960140-13960190	U87	brain:	n/a
50	chr7:13960140-13960190	HCT-116	colon:	n/a

(count:91 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:13980622..13983188-chr7:14022030..14023536,2	K562	blood:
2	chr7:13989697..13991875-chr7:13998508..14000403,2	K562	blood:
3	chr7:13993113..13994903-chr7:14003071..14005104,2	K562	blood:
4	chr7:13887425..13891202-chr7:13891537..13895717,6	K562	blood:
5	chr7:13929008..13930898-chr7:13949066..13950636,2	K562	blood:
6	chr7:13921967..13924964-chr7:13941231..13943091,2	K562	blood:
7	chr7:14007347..14010372-chr7:14013891..14016149,3	K562	blood:
8	chr7:13929540..13931526-chr7:13932770..13934783,2	K562	blood:
9	chr7:13985844..13987492-chr7:14019235..14021498,3	K562	blood:
10	chr7:13997007..14000342-chr7:14017723..14020427,3	K562	blood:
11	chr7:13931063..13934018-chr7:13935773..13937430,2	K562	blood:
12	chr7:13989697..13992273-chr7:13998903..14000492,2	K562	blood:
13	chr7:14006642..14008318-chr7:14033077..14034662,2	K562	blood:
14	chr7:13994487..13997447-chr7:13998861..14001557,3	K562	blood:
15	chr7:14014823..14017219-chr7:14018906..14020830,2	MCF-7	breast:
16	chr7:13993113..13994903-chr7:14003071..14005104,2	K562	blood:
17	chr7:14006832..14009874-chr7:14010267..14013655,4	K562	blood:
18	chr7:13929008..13930898-chr7:13949066..13950636,2	K562	blood:
19	chr7:13953124..13955887-chr7:14024617..14027108,2	K562	blood:
20	chr7:13997095..13998598-chr7:14011763..14014097,2	K562	blood:
21	chr7:13972971..13975876-chr7:14017215..14019067,2	K562	blood:
22	chr7:13999444..14001578-chr7:14011983..14013986,2	K562	blood:
23	chr7:13869026..13872125-chr7:13876719..13879737,3	K562	blood:
24	chr7:13894294..13896373-chr7:13930641..13933578,2	K562	blood:
25	chr7:14007347..14010372-chr7:14013891..14016149,3	K562	blood:
26	chr7:13883716..13885561-chr7:13890341..13892357,2	K562	blood:
27	chr7:13859282..13862271-chr7:13864269..13866964,2	K562	blood:
28	chr7:14011992..14014933-chr7:14015921..14017592,2	K562	blood:
29	chr7:13894294..13896373-chr7:13930641..13933578,2	K562	blood:
30	chr7:13989943..13991716-chr7:13993587..13996241,2	K562	blood:
31	chr7:13996982..13998734-chr7:14003556..14005276,2	K562	blood:
32	chr7:13972971..13975876-chr7:14017215..14019067,2	K562	blood:
33	chr7:13985844..13987492-chr7:14019235..14021498,3	K562	blood:
34	chr7:13941782..13943979-chr7:13946074..13948883,2	K562	blood:
35	chr7:13996982..13998734-chr7:14003556..14005276,2	K562	blood:
36	chr7:14006507..14011484-chr7:14016197..14021172,5	K562	blood:
37	chr7:13934709..13935267-chr7:14497324..14498029,2	MCF-7	breast:
38	chr7:13934057..13934906-chr7:14497131..14498025,4	MCF-7	breast:
39	chr7:13987784..13990174-chr7:13991754..13993508,2	K562	blood:
40	chr7:14014823..14017219-chr7:14018906..14020830,2	MCF-7	breast:
41	chr7:13998712..14001529-chr7:14011348..14014089,2	K562	blood:
42	chr7:13987872..13991716-chr7:13991871..13996241,5	K562	blood:
43	chr7:13859282..13862271-chr7:13864269..13866964,2	K562	blood:
44	chr7:13869026..13872125-chr7:13876719..13879737,3	K562	blood:
45	chr7:13929540..13931526-chr7:13932770..13934783,2	K562	blood:
46	chr7:13997566..14001513-chr7:14018273..14020813,4	K562	blood:
47	chr7:14008374..14010454-chr7:14010741..14014267,3	K562	blood:
48	chr7:13980412..13983231-chr7:14027961..14030275,2	K562	blood:
49	chr7:13964325..13967217-chr7:14020611..14022495,2	K562	blood:
50	chr7:13989697..13992273-chr7:13998903..14000492,2	K562	blood:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ETV1-3	chr7:13860505-13860772	NONHSAT119257
2	lnc-ARL4A-8	chr7:13934333-13934794	NONHSAT119259
3	lnc-ETV1-1	chr7:13898560-13898650	XLOC_006359
4	lnc-ETV1-1	chr7:13893980-13894247	XLOC_006359
5	lnc-ETV1-3	chr7:13865085-13865175	NONHSAT119257

No data

Variant related genes	Relation type
ENSG00000224330	TF binding region
ETV1	TF binding region
ENSG00000213875	TF binding region
ENSG00000224330	CpG island
ETV1	CpG island
ENSG00000213875	CpG island
ENSG00000224330	chromatin interactions
ENSG00000006468	chromatin interactions
ENSG00000252374	chromatin interactions

Extended variants
information (count: 6823 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:6823 , 50 per page) page: 1 2 3 4 5 6 7 ... 137

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs141326890	chr7:13860414-13860415	Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs113677820	chr7:13860432-13860433	Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs542731693	chr7:13860440-13860441	Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs6957915	chr7:13860490-13860491	Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs192670606	chr7:13860561-13860562	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
6	rs545053623	chr7:13860562-13860563	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
7	rs377160925	chr7:13860573-13860574	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
8	rs6976110	chr7:13860613-13860614	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
9	rs59741423	chr7:13860618-13860619	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
10	rs531224660	chr7:13860622-13860623	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
11	rs544881454	chr7:13860652-13860653	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
12	rs183232717	chr7:13860664-13860665	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
13	rs530290537	chr7:13860691-13860692	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
14	rs117992769	chr7:13860704-13860705	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
15	rs149000084	chr7:13860744-13860745	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
16	rs532179335	chr7:13860760-13860761	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
17	rs17733723	chr7:13860762-13860763	Active TSS	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs113090043	chr7:13860772-13860773	Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
19	rs565893280	chr7:13860781-13860782	Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs200786811	chr7:13860834-13860835	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs534988085	chr7:13860850-13860851	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs143806788	chr7:13860891-13860892	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs148176242	chr7:13860905-13860906	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs554412978	chr7:13860921-13860922	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs76168426	chr7:13860941-13860942	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs188498049	chr7:13860945-13860946	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs374048693	chr7:13860968-13860969	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs193083740	chr7:13860995-13860996	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs377636096	chr7:13861000-13861001	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs369685261	chr7:13861005-13861006	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs553462056	chr7:13861042-13861043	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs561133389	chr7:13861068-13861069	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs184997326	chr7:13861153-13861154	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs558692721	chr7:13861180-13861181	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs189943413	chr7:13861216-13861217	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs544943651	chr7:13861298-13861299	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs141118022	chr7:13861309-13861310	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs146943949	chr7:13861318-13861319	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs113219474	chr7:13861327-13861328	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs537278346	chr7:13861333-13861334	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs6461054	chr7:13861369-13861370	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs560232844	chr7:13861378-13861379	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs137966406	chr7:13861394-13861395	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs376613683	chr7:13861406-13861407	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs79244877	chr7:13861441-13861442	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs66535913	chr7:13861649-13861650	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs548111628	chr7:13861656-13861657	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs113425681	chr7:13861658-13861659	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs147184846	chr7:13861660-13861661	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs547268037	chr7:13861662-13861663	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Prostate cancer	16573809	CNVD
Acute myeloid leukemia	21251322	CNVD
Melanoma	17363583	CNVD
Kartagener syndrome	16639409	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	19242612	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	18194544	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Myelofibrosis	22110671	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD
Prostate cancer	21298110	CNVD
Glioblastoma multiforme	22122801	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Prostate cancer	17079440	CNVD
early-passage human iPS cells	21368824	CNVD
Pancreatic cancer	17952125	CNVD
Schizophrenia	19805367	CNVD
Glioblastoma multiforme	18628472	CNVD

Chromatin state (count:1639 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:13860400-13860800	Active TSS	Rectal Mucosa Donor 31	rectum
2	chr7:13860800-13861000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
3	chr7:13860800-13861200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr7:13860800-13861200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr7:13860800-13861200	Enhancers	Fetal Lung	lung
6	chr7:13860800-13861400	Enhancers	NHDF-Ad	bronchial
7	chr7:13860800-13862000	Enhancers	Osteobl	bone
8	chr7:13860800-13863000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr7:13861000-13861800	Enhancers	Muscle Satellite Cultured Cells	--
10	chr7:13861000-13862200	Enhancers	Rectal Mucosa Donor 29	rectum
11	chr7:13861000-13862600	Enhancers	Rectal Mucosa Donor 31	rectum
12	chr7:13861200-13862000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr7:13861400-13861800	Weak transcription	NHDF-Ad	bronchial
14	chr7:13861800-13862000	Enhancers	NHDF-Ad	bronchial
15	chr7:13861800-13862200	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr7:13862000-13862400	Enhancers	Sigmoid Colon	Sigmoid Colon
17	chr7:13862000-13862600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr7:13862000-13866600	Weak transcription	Osteobl	bone
19	chr7:13862000-13868800	Weak transcription	NHDF-Ad	bronchial
20	chr7:13862200-13862400	Enhancers	Muscle Satellite Cultured Cells	--
21	chr7:13862200-13863000	Enhancers	K562	blood
22	chr7:13862200-13863800	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr7:13862400-13864600	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr7:13862400-13868600	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr7:13862600-13863600	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr7:13862600-13871800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr7:13863000-13869000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr7:13863600-13864600	Enhancers	Rectal Mucosa Donor 31	rectum
29	chr7:13863800-13864600	Enhancers	Rectal Mucosa Donor 29	rectum
30	chr7:13864600-13864800	Enhancers	Sigmoid Colon	Sigmoid Colon
31	chr7:13866600-13867000	Enhancers	Osteobl	bone
32	chr7:13867000-13869200	Weak transcription	Osteobl	bone
33	chr7:13867400-13867800	Enhancers	HUES64 Cell Line	embryonic stem cell
34	chr7:13867400-13867800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr7:13867800-13870200	Weak transcription	HUES64 Cell Line	embryonic stem cell
36	chr7:13868000-13868800	Enhancers	iPS-18 Cell Line	embryonic stem cell
37	chr7:13868000-13870200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr7:13868400-13868800	Enhancers	Fetal Stomach	stomach
39	chr7:13868600-13871000	Enhancers	Muscle Satellite Cultured Cells	--
40	chr7:13868800-13869200	Weak transcription	Fetal Stomach	stomach
41	chr7:13868800-13871000	Enhancers	NHDF-Ad	bronchial
42	chr7:13868800-13871400	Enhancers	Fetal Heart	heart
43	chr7:13868800-13873200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr7:13869000-13870400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr7:13869000-13870600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr7:13869200-13870600	Enhancers	Fetal Stomach	stomach
47	chr7:13869200-13870800	Enhancers	Osteobl	bone
48	chr7:13869400-13870200	Enhancers	HSMM	muscle
49	chr7:13869400-13870600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr7:13869400-13870600	Enhancers	HSMMtube	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links