Variant report

Variant	nsv1020603
Chromosome Location	chr6:1697548-1921374
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2243)
CpG islands
(count:1893)
Chromatin interactive
region (count:150)
LncRNA
region (count:77)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2243 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:1768334-1768540	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:1793304-1793542	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:1703059-1703328	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:1789231-1789685	K562	blood:	n/a	n/a
5	ARID3A	chr6:1793283-1793587	K562	blood:	n/a	n/a
6	ARID3A	chr6:1820513-1820715	HepG2	liver:	n/a	n/a
7	ATF1	chr6:1798998-1799159	K562	blood:	n/a	n/a
8	ATF1	chr6:1704148-1704458	K562	blood:	n/a	n/a
9	ATF1	chr6:1901867-1902183	K562	blood:	n/a	n/a
10	ATF1	chr6:1738803-1739003	K562	blood:	n/a	n/a
11	ATF1	chr6:1842055-1842111	K562	blood:	n/a	n/a
12	ATF1	chr6:1878613-1879176	K562	blood:	n/a	n/a
13	ATF1	chr6:1821078-1821262	K562	blood:	n/a	n/a
14	ATF1	chr6:1789295-1789700	K562	blood:	n/a	n/a
15	ATF2	chr6:1739817-1740424	GM12878	blood:	n/a	n/a
16	ATF2	chr6:1869133-1869524	GM12878	blood:	n/a	n/a
17	ATF2	chr6:1797226-1797910	GM12878	blood:	n/a	n/a
18	ATF2	chr6:1739269-1740370	GM12878	blood:	n/a	n/a
19	ATF2	chr6:1797413-1797819	GM12878	blood:	n/a	n/a
20	BACH1	chr6:1872963-1873216	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr6:1793246-1793631	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr6:1703455-1703802	K562	blood:	n/a	n/a
23	BACH1	chr6:1793297-1793582	K562	blood:	n/a	n/a
24	BATF	chr6:1770584-1771056	GM12878	blood:	n/a	n/a
25	BATF	chr6:1739910-1740327	GM12878	blood:	n/a	n/a
26	BATF	chr6:1742330-1742664	GM12878	blood:	n/a	chr6:1742575-1742583
27	BATF	chr6:1739845-1740302	GM12878	blood:	n/a	n/a
28	BATF	chr6:1786966-1787390	GM12878	blood:	n/a	n/a
29	BATF	chr6:1787051-1787389	GM12878	blood:	n/a	n/a
30	BATF	chr6:1770716-1771073	GM12878	blood:	n/a	n/a
31	BATF	chr6:1739306-1739620	GM12878	blood:	n/a	n/a
32	BCL11A	chr6:1770592-1771106	GM12878	blood:	n/a	chr6:1770945-1770954 chr6:1770951-1770960
33	BCL11A	chr6:1770628-1771022	GM12878	blood:	n/a	chr6:1770945-1770954 chr6:1770951-1770960
34	BCL11A	chr6:1739888-1740256	GM12878	blood:	n/a	chr6:1740113-1740122 chr6:1740077-1740086
35	BCL11A	chr6:1739844-1740366	GM12878	blood:	n/a	chr6:1740113-1740122 chr6:1740077-1740086
36	BCL3	chr6:1786942-1787391	GM12878	blood:	n/a	chr6:1787126-1787135 chr6:1786955-1786963
37	BCL3	chr6:1737601-1738513	GM12878	blood:	n/a	n/a
38	BCL3	chr6:1737598-1738518	GM12878	blood:	n/a	n/a
39	BCL3	chr6:1739826-1740288	GM12878	blood:	n/a	chr6:1740113-1740122 chr6:1740077-1740086
40	BCL3	chr6:1771604-1772066	GM12878	blood:	n/a	n/a
41	BCL3	chr6:1881868-1882170	GM12878	blood:	n/a	n/a
42	BCL3	chr6:1736575-1736985	GM12878	blood:	n/a	n/a
43	BCL3	chr6:1730051-1730359	GM12878	blood:	n/a	chr6:1730217-1730226 chr6:1730284-1730293
44	BCLAF1	chr6:1739550-1740251	GM12878	blood:	n/a	chr6:1740113-1740122 chr6:1740077-1740086
45	BCLAF1	chr6:1739567-1740404	GM12878	blood:	n/a	chr6:1740113-1740122 chr6:1740077-1740086
46	BHLHE40	chr6:1770488-1771067	GM12878	blood:	n/a	n/a
47	BHLHE40	chr6:1739700-1740361	GM12878	blood:	n/a	n/a
48	BHLHE40	chr6:1793345-1793512	K562	blood:	n/a	n/a
49	BHLHE40	chr6:1703017-1703587	K562	blood:	n/a	n/a
50	BHLHE40	chr6:1703072-1703401	HepG2	liver:	n/a	n/a

(count:1893 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:1833916-1833966	HPAEpiC	pulmonary alveolar:	n/a
2	chr6:1909853-1909903	PrEC	prostate:	n/a
3	chr6:1833916-1833966	HPAEpiC	pulmonary alveolar:	n/a
4	chr6:1909853-1909903	PrEC	prostate:	n/a
5	chr6:1836850-1836900	NHDF-neo	bronchial:	n/a
6	chr6:1766046-1766096	LNCaP	prostate:	n/a
7	chr6:1766046-1766096	GM12892	blood:	n/a
8	chr6:1909853-1909903	HCT-116	colon:	n/a
9	chr6:1766567-1766617	LNCaP	prostate:	n/a
10	chr6:1758052-1758102	NT2-D1	testis:	n/a
11	chr6:1836850-1836900	HL-60	blood:	n/a
12	chr6:1730306-1730356	SK-N-SH_RA	brain:	n/a
13	chr6:1708629-1708679	Hela-S3	cervix:	n/a
14	chr6:1706830-1706880	MCF10A-Er-Src	breast:	n/a
15	chr6:1766606-1766656	U87	brain:	n/a
16	chr6:1758052-1758102	HIPEpiC	eye:	n/a
17	chr6:1766632-1766682	HEK293	kidney:	embryo
18	chr6:1909853-1909903	SAEC	small airway:	n/a
19	chr6:1836850-1836900	HCT-116	colon:	n/a
20	chr6:1909853-1909903	GM06990	blood:	n/a
21	chr6:1896512-1896562	HAEpiC	amniotic membrane:	n/a
22	chr6:1766316-1766366	AG09319	gingival:	n/a
23	chr6:1766129-1766179	GM12891	blood:	n/a
24	chr6:1836850-1836900	MCF-7	breast:	n/a
25	chr6:1873540-1873590	HIPEpiC	eye:	n/a
26	chr6:1917931-1917981	SK-N-SH_RA	brain:	n/a
27	chr6:1909853-1909903	A549	lung:	n/a
28	chr6:1896512-1896562	HIPEpiC	eye:	n/a
29	chr6:1873540-1873590	AG10803	skin:	n/a
30	chr6:1708629-1708679	AG10803	skin:	n/a
31	chr6:1766567-1766617	PFSK-1	brain:	n/a
32	chr6:1766606-1766656	ovcar-3	ovarian:	n/a
33	chr6:1802524-1802574	SAEC	small airway:	n/a
34	chr6:1841153-1841203	GM12878	blood:	n/a
35	chr6:1774548-1774598	PrEC	prostate:	n/a
36	chr6:1917931-1917981	HPAEpiC	pulmonary alveolar:	n/a
37	chr6:1766129-1766179	RPTEC	kidney:	n/a
38	chr6:1802524-1802574	AG04449	skin:	fetal
39	chr6:1896512-1896562	H1-hESC	embryonic stem cell:	embryo
40	chr6:1702693-1702743	SK-N-SH	brain:	n/a
41	chr6:1766567-1766617	K562	blood:	n/a
42	chr6:1833916-1833966	U87	brain:	n/a
43	chr6:1909853-1909903	HEK293	kidney:	embryo
44	chr6:1838155-1838205	GM12892	blood:	n/a
45	chr6:1708629-1708679	ProgFib	skin:	n/a
46	chr6:1766632-1766682	NH-A	brain:	n/a
47	chr6:1766046-1766096	AoSMC	blood vessel:	n/a
48	chr6:1702693-1702743	HRE	kidney:	n/a
49	chr6:1833916-1833966	AoSMC	blood vessel:	n/a
50	chr6:1812379-1812429	SK-N-SH_RA	brain:	n/a

(count:150 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr6:1797246..1799087-chr6:1805136..1807218,2	K562	blood:
2	chr6:1858177..1860635-chr6:1865077..1867804,2	MCF-7	breast:
3	chr6:1856826..1858830-chr6:1861067..1863033,2	MCF-7	breast:
4	chr6:1612642..1614747-chr6:1828037..1830665,2	MCF-7	breast:
5	chr6:1611913..1614321-chr6:1833472..1836057,3	MCF-7	breast:
6	chr6:1610217..1612226-chr6:1723387..1726071,3	MCF-7	breast:
7	chr6:1868113..1870293-chr6:1878428..1880757,2	MCF-7	breast:
8	chr6:1829103..1830910-chr6:1832147..1834124,2	MCF-7	breast:
9	chr6:1856826..1858830-chr6:1861067..1863033,2	MCF-7	breast:
10	chr6:1831250..1835471-chr6:1835503..1841068,8	MCF-7	breast:
11	chr6:1841908..1843510-chr6:1844738..1846986,2	MCF-7	breast:
12	chr6:1687393..1689735-chr6:1723369..1725669,2	MCF-7	breast:
13	chr6:1609064..1611202-chr6:1696861..1699392,3	MCF-7	breast:
14	chr6:1706527..1710172-chr6:1711910..1715681,3	K562	blood:
15	chr6:1833159..1835523-chr6:1854062..1855942,2	K562	blood:
16	chr22:50964903..50965473-chr6:1730306..1731136,2	Hela-S3	cervix:
17	chr6:1816700..1818272-chr6:1821927..1824699,2	MCF-7	breast:
18	chr6:1839372..1842046-chr6:1850595..1852706,2	MCF-7	breast:
19	chr6:1901619..1903388-chr6:1908460..1910593,2	MCF-7	breast:
20	chr6:1755640..1757171-chr6:1759989..1761623,2	K562	blood:
21	chr6:1755640..1757171-chr6:1759989..1761623,2	K562	blood:
22	chr6:1839714..1842732-chr6:1843630..1846250,4	MCF-7	breast:
23	chr6:1879945..1882331-chr6:1886412..1889066,2	K562	blood:
24	chr6:1839372..1842046-chr6:1850595..1852706,2	MCF-7	breast:
25	chr6:1876778..1878814-chr6:1880634..1882553,2	K562	blood:
26	chr6:1792364..1794850-chr6:1794950..1797651,3	K562	blood:
27	chr6:1641227..1642195-chr6:1832847..1833566,5	MCF-7	breast:
28	chr6:1909308..1911195-chr6:1919277..1921722,2	K562	blood:
29	chr6:1769402..1771120-chr6:1775658..1777745,2	K562	blood:
30	chr6:1845499..1849284-chr6:1851999..1854046,3	K562	blood:
31	chr6:1876778..1878814-chr6:1880634..1882553,2	K562	blood:
32	chr6:1797246..1799087-chr6:1805136..1807218,2	K562	blood:
33	chr6:1861369..1863684-chr6:1864416..1866242,2	K562	blood:
34	chr6:1641265..1641834-chr6:1839284..1840013,2	MCF-7	breast:
35	chr6:1709833..1714241-chr6:1719630..1722826,3	MCF-7	breast:
36	chr6:1604178..1605147-chr6:1698461..1699421,2	MCF-7	breast:
37	chr6:1719377..1721918-chr6:1724599..1726722,2	MCF-7	breast:
38	chr6:1641286..1642167-chr6:1767930..1768507,2	MCF-7	breast:
39	chr6:1861369..1863684-chr6:1864416..1866242,2	K562	blood:
40	chr6:1773332..1775371-chr6:1778272..1781076,2	MCF-7	breast:
41	chr6:1762365..1765398-chr6:1767554..1769715,3	K562	blood:
42	chr6:1827013..1828622-chr6:1829332..1831596,2	MCF-7	breast:
43	chr6:1606384..1611793-chr6:1762059..1766159,7	MCF-7	breast:
44	chr6:1714828..1716630-chr6:1737875..1739669,2	MCF-7	breast:
45	chr6:1892981..1894808-chr6:1898634..1901101,2	K562	blood:
46	chr6:1755526..1758374-chr6:1765956..1768528,2	MCF-7	breast:
47	chr6:1769402..1772177-chr6:1775658..1777982,2	K562	blood:
48	chr6:1839588..1841532-chr6:1851475..1853574,2	MCF-7	breast:
49	chr6:1756824..1758512-chr6:1760303..1761859,2	MCF-7	breast:
50	chr6:1709833..1714241-chr6:1719630..1722826,3	MCF-7	breast:

(count:77 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FOXC1-9	chr6:1889447-1889560	NONHSAT106555
2	lnc-FOXC1-9	chr6:1888716-1888829	NONHSAT106552
3	lnc-FOXC1-9	chr6:1888535-1888595	NONHSAT106554
4	lnc-FOXC1-9	chr6:1903590-1903661	NONHSAT106557
5	lnc-FOXC1-9	chr6:1887520-1887676	NONHSAT106553
6	lnc-FOXC1-9	chr6:1888320-1888411	NONHSAT106553
7	lnc-FOXC1-8	chr6:1741077-1741352	NONHSAT106545
8	lnc-FOXC1-9	chr6:1888251-1888407	NONHSAT106555
9	lnc-C6orf195-34	chr6:1806137-1806933	NONHSAT106547
10	lnc-FOXC1-8	chr6:1740270-1740480	NONHSAT106545
11	lnc-FOXC1-9	chr6:1889051-1889142	NONHSAT106555
12	lnc-FOXC1-8	chr6:1743077-1746752	NONHSAT106545
13	lnc-FOXC1-9	chr6:1903452-1903695	NONHSAT106552
14	lnc-FOXC1-9	chr6:1888251-1888407	NONHSAT106556
15	lnc-FOXC1-9	chr6:1901061-1901106	NONHSAT106553
16	lnc-FOXC1-8	chr6:1741460-1741576	NONHSAT106545
17	lnc-FOXC1-9	chr6:1888716-1888829	NONHSAT106554
18	lnc-FOXC1-9	chr6:1889051-1889142	NONHSAT106556
19	lnc-FOXC1-9	chr6:1904213-1905355	NONHSAT106552
20	lnc-FOXC1-9	chr6:1907481-1908235	NONHSAT106557
21	lnc-C6orf195-34	chr6:1775932-1776037	NONHSAT106546
22	lnc-FOXC1-9	chr6:1888320-1888411	NONHSAT106554
23	lnc-C6orf195-34	chr6:1767197-1772399	NONHSAT106546
24	lnc-C6orf195-34	chr6:1805934-1806156	NONHSAT106546
25	lnc-FOXC1-9	chr6:1889266-1889326	NONHSAT106555
26	lnc-FOXC1-9	chr6:1888144-1888204	NONHSAT106554
27	lnc-FOXC1-9	chr6:1888875-1888935	NONHSAT106557
28	lnc-FOXC1-9	chr6:1889013-1889114	NONHSAT106553
29	lnc-FOXC1-9	chr6:1887520-1887676	NONHSAT106552
30	lnc-FOXC1-9	chr6:1889013-1889114	NONHSAT106552
31	lnc-FOXC1-9	chr6:1901791-1901836	NONHSAT106557
32	lnc-FOXC1-9	chr6:1901791-1901836	NONHSAT106555
33	lnc-C6orf195-34	chr6:1774271-1774764	NONHSAT106546
34	lnc-FOXC1-9	chr6:1888251-1888407	NONHSAT106557
35	lnc-FOXC1-9	chr6:1889447-1889560	NONHSAT106557
36	lnc-FOXC1-9	chr6:1904182-1906085	NONHSAT106555
37	lnc-FOXC1-8	chr6:1742168-1742215	NONHSAT106545
38	lnc-FOXC1-9	chr6:1889051-1889142	NONHSAT106557
39	lnc-FOXC1-9	chr6:1902860-1902931	NONHSAT106552
40	lnc-FOXC1-9	chr6:1888875-1888935	NONHSAT106556
41	lnc-FOXC1-9	chr6:1906751-1907505	NONHSAT106554
42	lnc-FOXC1-9	chr6:1901219-1901287	NONHSAT106554
43	lnc-FOXC1-9	chr6:1901061-1901106	NONHSAT106552
44	lnc-FOXC1-9	chr6:1889744-1889845	NONHSAT106556
45	lnc-FOXC1-9	chr6:1901949-1902017	NONHSAT106557
46	lnc-C6orf195-34	chr6:1794049-1794262	NONHSAT106547
47	lnc-FOXC1-9	chr6:1889744-1889845	NONHSAT106555
48	lnc-FOXC1-9	chr6:1888875-1888935	NONHSAT106555
49	lnc-FOXC1-9	chr6:1889013-1889114	NONHSAT106554
50	lnc-FOXC1-9	chr6:1907309-1907388	NONHSAT106557

No data

Variant related genes	Relation type
GMDS	TF binding region
GMDS	CpG island
ENSG00000112699	chromatin interactions
ENSG00000054598	chromatin interactions

Extended variants
information (count: 8857 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:8857 , 50 per page) page: 1 2 3 4 5 6 7 ... 178

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs149162480	chr6:1697550-1697551	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs200771796	chr6:1697602-1697603	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs577321043	chr6:1697626-1697627	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs532245515	chr6:1697629-1697630	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs6925915	chr6:1697631-1697632	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs568669434	chr6:1697730-1697731	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs537632404	chr6:1697749-1697750	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs143269226	chr6:1697774-1697775	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs151274850	chr6:1697775-1697776	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs12525841	chr6:1697776-1697777	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs112865988	chr6:1697783-1697784	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs556231963	chr6:1697834-1697835	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs35137252	chr6:1697839-1697840	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs577619302	chr6:1697854-1697855	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs576166291	chr6:1697862-1697863	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs369930571	chr6:1697893-1697894	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs546480875	chr6:1697897-1697898	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs537118130	chr6:1698042-1698043	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs576625103	chr6:1698095-1698096	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs542036477	chr6:1698100-1698101	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs562244620	chr6:1698143-1698144	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs181120239	chr6:1698171-1698172	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs377214665	chr6:1698196-1698197	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs4538755	chr6:1698198-1698199	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs561710407	chr6:1698228-1698229	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs572410091	chr6:1698246-1698247	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs564090522	chr6:1698277-1698278	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs560208330	chr6:1698299-1698300	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs111245870	chr6:1698300-1698301	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs532282228	chr6:1698302-1698303	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs117839947	chr6:1698322-1698323	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs375610932	chr6:1698369-1698370	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs568806743	chr6:1698391-1698392	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs142139306	chr6:1698403-1698404	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs548063625	chr6:1698409-1698410	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs568171776	chr6:1698411-1698412	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs540106978	chr6:1698458-1698459	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs145986956	chr6:1698469-1698470	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs553813718	chr6:1698522-1698523	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs570505731	chr6:1698544-1698545	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs114512755	chr6:1698548-1698549	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs138911143	chr6:1698590-1698591	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs186566675	chr6:1698627-1698628	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs557111922	chr6:1698650-1698651	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs202083649	chr6:1698703-1698704	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs78015849	chr6:1698715-1698716	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs142363097	chr6:1698805-1698806	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs558625288	chr6:1698810-1698811	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs552383182	chr6:1698815-1698816	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs191566575	chr6:1698834-1698835	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Prader-willi syndrome	20588305	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	20164919	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
small cell lung cancer	20016488	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-small cell lung cancer	16651412	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:3177 , 50 per page) page: 1 2 3 4 5 6 7 ... 64

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:1679600-1715600	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr6:1681600-1699200	Weak transcription	Pancreas	Pancrea
3	chr6:1683000-1698600	Weak transcription	Primary T cells from cord blood	blood
4	chr6:1686600-1700000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr6:1686600-1700800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr6:1686800-1701600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr6:1688600-1706400	Weak transcription	Gastric	stomach
8	chr6:1690000-1701200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr6:1690000-1715000	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr6:1690400-1703200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr6:1693400-1701600	Strong transcription	HepG2	liver
12	chr6:1693600-1718200	Weak transcription	Primary hematopoietic stem cells	blood
13	chr6:1693800-1708400	Weak transcription	Fetal Intestine Small	intestine
14	chr6:1694000-1709400	Weak transcription	Duodenum Mucosa	Duodenum
15	chr6:1694200-1724400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr6:1695400-1729400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr6:1695800-1731400	Weak transcription	Fetal Intestine Large	intestine
18	chr6:1696200-1705600	Weak transcription	Sigmoid Colon	Sigmoid Colon
19	chr6:1696400-1700000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr6:1696600-1699800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr6:1696600-1702400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr6:1697000-1700200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr6:1697000-1700200	Weak transcription	Osteobl	bone
24	chr6:1697000-1701200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr6:1697000-1702400	Weak transcription	Aorta	Aorta
26	chr6:1697200-1700000	Weak transcription	Fetal Muscle Leg	muscle
27	chr6:1697400-1697600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
28	chr6:1698000-1699200	Enhancers	Primary neutrophils fromperipheralblood	blood
29	chr6:1698600-1698800	Enhancers	Primary T cells from cord blood	blood
30	chr6:1698600-1699000	Enhancers	Placenta	Placenta
31	chr6:1698600-1699400	Enhancers	Monocytes-CD14+_RO01746	blood
32	chr6:1698600-1699600	Enhancers	Primary monocytes fromperipheralblood	blood
33	chr6:1698800-1699200	Weak transcription	Primary T cells from cord blood	blood
34	chr6:1699000-1699400	Enhancers	Adipose Nuclei	Adipose
35	chr6:1699000-1699400	Enhancers	Lung	lung
36	chr6:1699000-1700800	Weak transcription	Placenta	Placenta
37	chr6:1699200-1699400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
38	chr6:1699200-1699400	Enhancers	Pancreas	Pancrea
39	chr6:1699200-1699800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
40	chr6:1699200-1699800	Enhancers	Primary T cells from cord blood	blood
41	chr6:1699400-1700600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
42	chr6:1699400-1701600	Weak transcription	Adipose Nuclei	Adipose
43	chr6:1699400-1703200	Weak transcription	Lung	lung
44	chr6:1699600-1699800	Enhancers	Spleen	Spleen
45	chr6:1699600-1700800	Enhancers	NHDF-Ad	bronchial
46	chr6:1699800-1700000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
47	chr6:1699800-1700200	Enhancers	Primary neutrophils fromperipheralblood	blood
48	chr6:1699800-1709200	Weak transcription	Spleen	Spleen
49	chr6:1699800-1716600	Weak transcription	Primary T cells from cord blood	blood
50	chr6:1700000-1700200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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