Variant report

Variant nsv1020653
Chromosome Location chr6:24557870-24638244
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:409 , 50 per page) page: 1 2 3 4 5 6 7 ... 9
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24496200-24583000 Weak transcription Hela-S3 cervix
2 chr6:24535200-24566600 Weak transcription Brain Germinal Matrix brain
3 chr6:24535200-24591200 Weak transcription Fetal Brain Male brain
4 chr6:24535600-24560600 Weak transcription Brain Anterior Caudate brain
5 chr6:24535600-24560600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr6:24535600-24563200 Weak transcription Brain Angular Gyrus brain
7 chr6:24535600-24583400 Weak transcription Brain Cingulate Gyrus brain
8 chr6:24539200-24583200 Weak transcription Fetal Intestine Small intestine
9 chr6:24548400-24583400 Weak transcription A549 lung
10 chr6:24550200-24566400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr6:24552600-24568800 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr6:24554600-24563600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr6:24556600-24559200 Weak transcription Fetal Brain Female brain
14 chr6:24559200-24559600 Enhancers Pancreas Pancrea
15 chr6:24559200-24559800 Strong transcription Fetal Brain Female brain
16 chr6:24559600-24577600 Weak transcription Pancreas Pancrea
17 chr6:24559800-24563200 Weak transcription Fetal Brain Female brain
18 chr6:24560600-24560800 Bivalent Enhancer H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:24560600-24561000 Enhancers Psoas Muscle Psoas
20 chr6:24560600-24561600 Strong transcription Brain Anterior Caudate brain
21 chr6:24560600-24562000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr6:24560800-24561000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:24561600-24563200 Weak transcription Brain Anterior Caudate brain
24 chr6:24561800-24562200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr6:24562000-24563200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr6:24562400-24583400 Weak transcription Right Atrium heart
27 chr6:24563200-24564400 Strong transcription Brain Angular Gyrus brain
28 chr6:24563200-24564400 Strong transcription Brain Anterior Caudate brain
29 chr6:24563200-24564400 Bivalent Enhancer HepG2 liver
30 chr6:24563200-24565200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr6:24563200-24565200 Strong transcription Fetal Brain Female brain
32 chr6:24563400-24565000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr6:24563600-24564800 Strong transcription Brain Inferior Temporal Lobe brain
34 chr6:24564000-24564800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr6:24564400-24564600 Flanking Bivalent TSS/Enh HepG2 liver
36 chr6:24564400-24583400 Weak transcription Brain Angular Gyrus brain
37 chr6:24564400-24583400 Weak transcription Brain Anterior Caudate brain
38 chr6:24564800-24566200 Weak transcription Brain Inferior Temporal Lobe brain
39 chr6:24565200-24569600 Weak transcription Fetal Brain Female brain
40 chr6:24565200-24570000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr6:24566200-24567000 Strong transcription Brain Inferior Temporal Lobe brain
42 chr6:24566200-24567000 Enhancers HepG2 liver
43 chr6:24566400-24566800 Enhancers Rectal Mucosa Donor 31 rectum
44 chr6:24566600-24567000 Strong transcription Brain Germinal Matrix brain
45 chr6:24566600-24567000 Enhancers Osteobl bone
46 chr6:24566800-24567000 Enhancers Fetal Muscle Leg muscle
47 chr6:24566800-24568400 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr6:24567000-24568800 Weak transcription Brain Germinal Matrix brain
49 chr6:24567000-24569800 Weak transcription Brain Inferior Temporal Lobe brain
50 chr6:24568000-24568800 Bivalent Enhancer HepG2 liver

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