Variant report

Variant	nsv1021187
Chromosome Location	chr7:100993420-101178831
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2651)
CpG islands
(count:1772)
Chromatin interactive
region (count:105)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2651 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:101151006-101151468	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:101151005-101151499	K562	blood:	n/a	n/a
3	ARID3A	chr7:101034275-101034431	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:100995557-100996013	K562	blood:	n/a	n/a
5	ARID3A	chr7:101054542-101054748	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:100995510-100995986	HepG2	liver:	n/a	n/a
7	ARID3A	chr7:101029701-101030402	HepG2	liver:	n/a	n/a
8	ARID3A	chr7:101041212-101041406	HepG2	liver:	n/a	n/a
9	ATF1	chr7:100995667-100996035	K562	blood:	n/a	n/a
10	ATF2	chr7:101045113-101045819	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr7:101034154-101034562	GM12878	blood:	n/a	n/a
12	ATF2	chr7:101045260-101045884	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr7:101034206-101034498	GM12878	blood:	n/a	n/a
14	ATF2	chr7:101007153-101007579	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr7:101054507-101054909	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr7:101005691-101006042	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF3	chr7:101083791-101083930	K562	blood:	n/a	n/a
18	ATF3	chr7:100995608-100996147	K562	blood:	n/a	n/a
19	BACH1	chr7:101054392-101054843	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr7:101042008-101042270	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr7:101006969-101007517	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr7:101080560-101080609	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr7:101083766-101083964	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr7:101006064-101006399	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr7:101045151-101045712	H1-hESC	embryonic stem cell:	n/a	n/a
26	BCL11A	chr7:101045447-101045692	H1-hESC	embryonic stem cell:	n/a	chr7:101045565-101045572 chr7:101045573-101045582
27	BCL11A	chr7:101034127-101034558	GM12878	blood:	n/a	n/a
28	BCL3	chr7:101045252-101045835	A549	lung:	n/a	chr7:101045565-101045572 chr7:101045573-101045582 chr7:101045420-101045433
29	BCL3	chr7:101006990-101007617	A549	lung:	n/a	chr7:101007240-101007249 chr7:101007424-101007437
30	BCL3	chr7:101071831-101072136	GM12878	blood:	n/a	n/a
31	BCL3	chr7:101071768-101072139	GM12878	blood:	n/a	n/a
32	BCL3	chr7:100995430-100996053	A549	lung:	n/a	chr7:100995867-100995874
33	BCL3	chr7:100995424-100996093	A549	lung:	n/a	chr7:100995867-100995874
34	BCL3	chr7:101085899-101086361	GM12878	blood:	n/a	n/a
35	BCL3	chr7:101045065-101045790	A549	lung:	n/a	chr7:101045565-101045572 chr7:101045573-101045582 chr7:101045420-101045433
36	BCL3	chr7:101085919-101086314	GM12878	blood:	n/a	n/a
37	BCL3	chr7:101034235-101034520	GM12878	blood:	n/a	n/a
38	BCL3	chr7:101148313-101148728	GM12878	blood:	n/a	n/a
39	BCL3	chr7:101151002-101151580	A549	lung:	n/a	n/a
40	BCL3	chr7:101148436-101148714	GM12878	blood:	n/a	n/a
41	BHLHE40	chr7:101083725-101083894	GM12878	blood:	n/a	n/a
42	BHLHE40	chr7:101054571-101054732	K562	blood:	n/a	n/a
43	BHLHE40	chr7:101151110-101151365	K562	blood:	n/a	n/a
44	BHLHE40	chr7:101085990-101086330	K562	blood:	n/a	n/a
45	BHLHE40	chr7:100995649-100996149	K562	blood:	n/a	n/a
46	BHLHE40	chr7:101034158-101034493	GM12878	blood:	n/a	n/a
47	BHLHE40	chr7:101148405-101148593	K562	blood:	n/a	n/a
48	BHLHE40	chr7:101006937-101007505	HepG2	liver:	n/a	n/a
49	BHLHE40	chr7:101007335-101007606	GM12878	blood:	n/a	n/a
50	BHLHE40	chr7:101007069-101007443	K562	blood:	n/a	n/a

(count:1772 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:101006058-101006108	SK-N-SH_RA	brain:	n/a
2	chr7:101142153-101142203	Jurkat	blood:	n/a
3	chr7:101005910-101005960	HRPEpiC	eye:	n/a
4	chr7:101006058-101006108	SK-N-SH_RA	brain:	n/a
5	chr7:101142153-101142203	Jurkat	blood:	n/a
6	chr7:101005910-101005960	HRPEpiC	eye:	n/a
7	chr7:101006963-101007013	Hepatocyte	liver:	n/a
8	chr7:101132009-101132059	H1-hESC	embryonic stem cell:	embryo
9	chr7:101017354-101017404	HAEpiC	amniotic membrane:	n/a
10	chr7:101049372-101049422	CMK	blood:	n/a
11	chr7:101171330-101171380	U87	brain:	n/a
12	chr7:101006052-101006102	SK-N-MC	brain:	n/a
13	chr7:101007072-101007122	BJ	skin:	n/a
14	chr7:101055912-101055962	NH-A	brain:	n/a
15	chr7:101005832-101005882	A549	lung:	n/a
16	chr7:101017354-101017404	HUVEC	blood vessel:	n/a
17	chr7:101063331-101063381	PFSK-1	brain:	n/a
18	chr7:101055912-101055962	RPTEC	kidney:	n/a
19	chr7:101007190-101007240	SAEC	small airway:	n/a
20	chr7:101007442-101007492	PFSK-1	brain:	n/a
21	chr7:101006963-101007013	HRCEpiC	kidney:	n/a
22	chr7:101138089-101138139	HNPCEpiC	eye:	n/a
23	chr7:101007072-101007122	PrEC	prostate:	n/a
24	chr7:101007603-101007653	BJ	skin:	n/a
25	chr7:101171330-101171380	IMR90	lung:	fetal
26	chr7:101007072-101007122	HIPEpiC	eye:	n/a
27	chr7:101132009-101132059	HepG2	liver:	n/a
28	chr7:101006308-101006358	HepG2	liver:	n/a
29	chr7:101049372-101049422	HCF	heart:	n/a
30	chr7:101007442-101007492	AG04450	lung:	fetal
31	chr7:101006963-101007013	PFSK-1	brain:	n/a
32	chr7:101142153-101142203	HCF	heart:	n/a
33	chr7:101132009-101132059	GM12891	blood:	n/a
34	chr7:101079617-101079667	MCF10A-Er-Src	breast:	n/a
35	chr7:101063331-101063381	SKMC	muscle:	n/a
36	chr7:101129980-101130030	Hela-S3	cervix:	n/a
37	chr7:101005846-101005896	K562	blood:	n/a
38	chr7:101006363-101006413	GM12892	blood:	n/a
39	chr7:101171330-101171380	HEK293	kidney:	embryo
40	chr7:101007442-101007492	BJ	skin:	n/a
41	chr7:101006308-101006358	K562	blood:	n/a
42	chr7:101007442-101007492	HNPCEpiC	eye:	n/a
43	chr7:101079617-101079667	A549	lung:	n/a
44	chr7:101006363-101006413	Jurkat	blood:	n/a
45	chr7:101049372-101049422	MCF10A-Er-Src	breast:	n/a
46	chr7:101006058-101006108	T-47D	breast:	n/a
47	chr7:101049372-101049422	BE2_C	brain:	n/a
48	chr7:101006058-101006108	ECC-1	luminal epithelium:	n/a
49	chr7:101079617-101079667	AG04450	lung:	fetal
50	chr7:101006573-101006623	HEK293	kidney:	embryo

(count:105 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr7:101150080..101152879-chr7:101154593..101156127,2	K562	blood:
2	chr7:101169835..101171791-chr7:101181175..101183653,2	K562	blood:
3	chr7:101054216..101055052-chr7:101150685..101151359,3	MCF-7	breast:
4	chr7:101023195..101025977-chr7:101028738..101030293,2	K562	blood:
5	chr7:101115888..101118705-chr7:101119430..101120969,2	MCF-7	breast:
6	chr7:101041365..101043542-chr7:101048323..101050814,2	MCF-7	breast:
7	chr7:101112161..101112969-chr7:101150803..101151689,2	MCF-7	breast:
8	chr7:100958176..100959175-chr7:101150758..101151564,2	MCF-7	breast:
9	chr7:101039985..101042024-chr7:101043789..101046579,2	MCF-7	breast:
10	chr7:100964942..100967208-chr7:101081876..101083958,2	MCF-7	breast:
11	chr7:101100607..101102049-chr7:101150824..101151606,9	MCF-7	breast:
12	chr7:101100597..101102046-chr7:101150673..101151702,7	MCF-7	breast:
13	chr7:101006966..101007850-chr7:101054283..101055103,3	MCF-7	breast:
14	chr7:100895581..100897444-chr7:101158213..101159730,2	MCF-7	breast:
15	chr7:101100607..101102049-chr7:101150824..101151606,9	MCF-7	breast:
16	chr7:101023195..101026718-chr7:101028403..101030293,3	K562	blood:
17	chr7:101037193..101039012-chr7:101045881..101047459,2	MCF-7	breast:
18	chr7:101151201..101151770-chr7:101181797..101182747,2	MCF-7	breast:
19	chr7:101068095..101068916-chr7:101150848..101151469,2	MCF-7	breast:
20	chr7:100989055..100991707-chr7:100994198..100995736,2	MCF-7	breast:
21	chr7:101006908..101008057-chr7:101150804..101151679,7	MCF-7	breast:
22	chr7:101032377..101034733-chr7:101037402..101040388,2	MCF-7	breast:
23	chr7:101006530..101007875-chr7:101054200..101055148,9	MCF-7	breast:
24	chr7:101032377..101034733-chr7:101037402..101040388,2	MCF-7	breast:
25	chr7:101006862..101007822-chr7:101083395..101084349,8	MCF-7	breast:
26	chr7:101067571..101069515-chr7:101079650..101082212,2	MCF-7	breast:
27	chr7:101023195..101026718-chr7:101028403..101030293,3	K562	blood:
28	chr7:101006441..101008974-chr7:101023704..101025266,2	MCF-7	breast:
29	chr7:101175649..101178492-chr7:101181142..101183684,2	K562	blood:
30	chr7:101084569..101086934-chr7:101141583..101143364,2	MCF-7	breast:
31	chr7:100925966..100926493-chr7:101150818..101151617,2	K562	blood:
32	chr7:101006862..101007822-chr7:101083395..101084349,8	MCF-7	breast:
33	chr7:101054544..101055233-chr7:101150595..101151343,2	K562	blood:
34	chr7:101006966..101007850-chr7:101054283..101055103,3	MCF-7	breast:
35	chr7:101006939..101007476-chr7:101083770..101084337,2	K562	blood:
36	chr7:101117670..101118572-chr7:101150768..101151530,2	MCF-7	breast:
37	chr7:100481636..100484025-chr7:101177700..101179371,2	K562	blood:
38	chr7:100964862..100966069-chr7:101150864..101151681,3	MCF-7	breast:
39	chr7:101131107..101133497-chr7:101133742..101135419,2	K562	blood:
40	chr7:101006746..101007872-chr7:101054217..101055171,4	K562	blood:
41	chr7:101168305..101170280-chr7:101929643..101931645,2	K562	blood:
42	chr7:101007762..101011060-chr7:101013667..101017793,3	K562	blood:
43	chr7:100965050..100966058-chr7:101150850..101151645,3	MCF-7	breast:
44	chr7:101175649..101178492-chr7:101180631..101183684,3	K562	blood:
45	chr7:101006995..101008302-chr7:101082934..101084354,6	MCF-7	breast:
46	chr7:100933432..100934555-chr7:101150641..101151287,4	MCF-7	breast:
47	chr7:101006510..101007838-chr7:101150604..101151700,15	MCF-7	breast:
48	chr7:101110378..101112867-chr7:101115903..101117438,2	K562	blood:
49	chr7:101012941..101015108-chr7:101017148..101018749,2	K562	blood:
50	chr7:101006838..101009123-chr7:101009732..101012047,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RABL5-2	chr7:101032149-101032361	NONHSAT122467
2	lnc-RABL5-1	chr7:100998850-100999006	ucscGeneNc_uc003uyp_2
3	lnc-RABL5-1	chr7:100995310-100996633	ucscGeneNc_uc003uyp_2

No data

Variant related genes	Relation type
ENSG00000233683	TF binding region
COL26A1	TF binding region
ENSG00000233683	CpG island
COL26A1	CpG island
ENSG00000087087	chromatin interactions
ENSG00000232445	chromatin interactions
ENSG00000177192	chromatin interactions
ENSG00000214253	chromatin interactions
ENSG00000233683	chromatin interactions
ENSG00000255992	chromatin interactions
ENSG00000128581	chromatin interactions
ENSG00000160963	chromatin interactions

Extended variants
information (count: 8257 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:8257 , 50 per page) page: 1 2 3 4 5 6 7 ... 166

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs563186009	chr7:100993425-100993426	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs115745696	chr7:100993429-100993430	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs115758687	chr7:100993430-100993431	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs532699339	chr7:100993433-100993434	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs186527252	chr7:100993439-100993440	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs527351645	chr7:100993446-100993447	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs148374877	chr7:100993449-100993450	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs567051737	chr7:100993455-100993456	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs531402089	chr7:100993466-100993467	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs76774122	chr7:100993482-100993483	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs554733221	chr7:100993540-100993541	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs13237806	chr7:100993567-100993568	Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs150448023	chr7:100993597-100993598	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs62465596	chr7:100993608-100993609	Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs13226233	chr7:100993655-100993656	Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs373092113	chr7:100993661-100993662	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs191028589	chr7:100993662-100993663	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs144026903	chr7:100993704-100993705	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs371567922	chr7:100993710-100993711	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs573275565	chr7:100993743-100993744	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs75942839	chr7:100993749-100993750	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs182459681	chr7:100993754-100993755	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs555923862	chr7:100993793-100993794	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs13226176	chr7:100993838-100993839	Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs578175467	chr7:100993842-100993843	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs545393904	chr7:100993850-100993851	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs147372677	chr7:100993851-100993852	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs138060408	chr7:100993856-100993857	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs201312299	chr7:100993890-100993891	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs386716236	chr7:100993892-100993893	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs55941500	chr7:100993894-100993895	Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs531306058	chr7:100993906-100993907	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs549904108	chr7:100993937-100993938	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs187708521	chr7:100993976-100993977	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs544357032	chr7:100993990-100993991	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs113598899	chr7:100993991-100993992	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs116939766	chr7:100993992-100993993	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs566021771	chr7:100994011-100994012	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs372178637	chr7:100994051-100994052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs549402183	chr7:100994067-100994068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs558593639	chr7:100994075-100994076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs567721095	chr7:100994083-100994084	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs150128731	chr7:100994084-100994085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs553220641	chr7:100994141-100994142	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs199812840	chr7:100994153-100994154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs556689079	chr7:100994180-100994181	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs578093183	chr7:100994202-100994203	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs539254652	chr7:100994209-100994210	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs554032852	chr7:100994255-100994256	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs148678516	chr7:100994258-100994259	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16461572	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Bladder cancer	21909424	CNVD
Biliary cancer	19435499	CNVD
Myelofibrosis	22110671	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	16608533	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Liver carcinoma	19366792	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Adenocarcinoma	19607727	CNVD
Multiple myeloma	16461302	CNVD
Breast cancer	21858162	CNVD
Emphysema	19352772	CNVD
Effusion lymphoma	18079361	CNVD
Medulloblastoma	17653508	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Autism	19401682	CNVD
Neuroticism	17667963	CNVD
Breast cancer	21509527	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Prostate cancer	18632612	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:2401 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:100991000-101006000	Weak transcription	Right Atrium	heart
2	chr7:100993000-100994000	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr7:100993400-100994800	Weak transcription	K562	blood
4	chr7:100993400-100995000	Weak transcription	HepG2	liver
5	chr7:100993400-100995600	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr7:100993400-101005400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr7:100994000-100995600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr7:100994600-100995200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
9	chr7:100994800-100995400	Enhancers	A549	lung
10	chr7:100994800-100996000	Enhancers	Stomach Mucosa	stomach
11	chr7:100994800-100996400	Enhancers	K562	blood
12	chr7:100995000-100995200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr7:100995000-100995400	Enhancers	Hela-S3	cervix
14	chr7:100995000-100996400	Enhancers	Liver	Liver
15	chr7:100995000-100996400	Enhancers	Rectal Mucosa Donor 31	rectum
16	chr7:100995000-100996600	Enhancers	HepG2	liver
17	chr7:100995200-101005600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr7:100995400-100995800	Enhancers	Fetal Intestine Large	intestine
19	chr7:100995400-100995800	Enhancers	Fetal Muscle Leg	muscle
20	chr7:100995400-100996000	Enhancers	Primary T helper cells fromperipheralblood	blood
21	chr7:100995400-100996000	Enhancers	Fetal Intestine Small	intestine
22	chr7:100995400-100996000	Flanking Active TSS	A549	lung
23	chr7:100995400-100996200	Flanking Active TSS	Hela-S3	cervix
24	chr7:100995600-100995800	Enhancers	HUES6 Cell Line	embryonic stem cell
25	chr7:100995600-100995800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
26	chr7:100995600-100996000	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr7:100995600-100996000	Enhancers	Duodenum Mucosa	Duodenum
28	chr7:100995600-100996200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
29	chr7:100995800-100996000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
30	chr7:100996000-100996400	Enhancers	A549	lung
31	chr7:100996200-100996600	Enhancers	Hela-S3	cervix
32	chr7:100996400-101000200	Weak transcription	Liver	Liver
33	chr7:100996400-101000600	Weak transcription	A549	lung
34	chr7:100996600-101004000	Weak transcription	HepG2	liver
35	chr7:100996600-101007000	Weak transcription	Hela-S3	cervix
36	chr7:100997400-100998000	Enhancers	Primary monocytes fromperipheralblood	blood
37	chr7:101000200-101001200	Enhancers	Liver	Liver
38	chr7:101000600-101001200	Enhancers	A549	lung
39	chr7:101000800-101001000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr7:101001200-101005600	Weak transcription	Liver	Liver
41	chr7:101004000-101004200	Enhancers	HepG2	liver
42	chr7:101004200-101004400	Weak transcription	HepG2	liver
43	chr7:101005000-101008000	Active TSS	ES-I3 Cell Line	embryonic stem cell
44	chr7:101005200-101005400	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr7:101005200-101005400	Active TSS	HUES6 Cell Line	embryonic stem cell
46	chr7:101005200-101005400	Active TSS	HUES64 Cell Line	embryonic stem cell
47	chr7:101005200-101005400	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
48	chr7:101005200-101005400	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
49	chr7:101005200-101005400	Enhancers	Brain Hippocampus Middle	brain
50	chr7:101005200-101005400	Bivalent Enhancer	HepG2	liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links