Variant report

Variant	nsv1021208
Chromosome Location	chr7:153524878-153728144
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:574)
CpG islands
(count:1281)
Chromatin interactive
region (count:42)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:574 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:153590800-153590804	K562	blood:	n/a	n/a
2	ARID3A	chr7:153531658-153531679	HepG2	liver:	n/a	n/a
3	ATF1	chr7:153545773-153545921	K562	blood:	n/a	n/a
4	BACH1	chr7:153631881-153631909	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr7:153539559-153539602	K562	blood:	n/a	n/a
6	BACH1	chr7:153591752-153591756	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr7:153583560-153584651	H1-hESC	embryonic stem cell:	n/a	n/a
8	BCL3	chr7:153686171-153686487	GM12878	blood:	n/a	n/a
9	BCL3	chr7:153686222-153686486	GM12878	blood:	n/a	n/a
10	BHLHE40	chr7:153597667-153597672	K562	blood:	n/a	n/a
11	BHLHE40	chr7:153671731-153672005	HepG2	liver:	n/a	n/a
12	BRCA1	chr7:153631179-153631191	HepG2	liver:	n/a	n/a
13	BRCA1	chr7:153555396-153555505	HepG2	liver:	n/a	n/a
14	CCNT2	chr7:153538905-153539222	K562	blood:	n/a	n/a
15	CEBPB	chr7:153538026-153538375	HepG2	liver:	n/a	n/a
16	CEBPB	chr7:153538058-153538388	Hela-S3	cervix:	n/a	n/a
17	CEBPB	chr7:153649215-153649575	A549	lung:	n/a	chr7:153649388-153649399
18	CEBPB	chr7:153708400-153708682	K562	blood:	n/a	chr7:153708509-153708518 chr7:153708509-153708518 chr7:153708509-153708518 chr7:153708507-153708518 chr7:153708509-153708518
19	CEBPB	chr7:153573602-153573901	MCF-7	breast:	n/a	n/a
20	CEBPB	chr7:153632851-153633134	HepG2	liver:	n/a	chr7:153632987-153632998 chr7:153632987-153633000
21	CEBPB	chr7:153558923-153559017	K562	blood:	n/a	chr7:153558992-153559003
22	CEBPB	chr7:153661713-153661899	HepG2	liver:	n/a	n/a
23	CEBPB	chr7:153538062-153538353	A549	lung:	n/a	n/a
24	CEBPB	chr7:153671722-153671982	HepG2	liver:	n/a	n/a
25	CEBPB	chr7:153653827-153654031	K562	blood:	n/a	chr7:153653924-153653933
26	CEBPB	chr7:153653846-153654075	A549	lung:	n/a	chr7:153653924-153653933
27	CEBPB	chr7:153649223-153649552	HepG2	liver:	n/a	chr7:153649388-153649399
28	CEBPB	chr7:153708328-153708611	HepG2	liver:	n/a	chr7:153708509-153708518 chr7:153708509-153708518 chr7:153708509-153708518 chr7:153708507-153708518 chr7:153708509-153708518
29	CEBPB	chr7:153708406-153708655	A549	lung:	n/a	chr7:153708509-153708518 chr7:153708509-153708518 chr7:153708509-153708518 chr7:153708507-153708518 chr7:153708509-153708518
30	CEBPB	chr7:153650331-153650429	K562	blood:	n/a	n/a
31	CEBPB	chr7:153632890-153633162	K562	blood:	n/a	chr7:153632987-153632998 chr7:153632987-153633000
32	CEBPB	chr7:153703491-153703685	HepG2	liver:	n/a	chr7:153703626-153703637 chr7:153703628-153703637
33	CEBPB	chr7:153558884-153559293	HepG2	liver:	n/a	chr7:153558992-153559003
34	CEBPB	chr7:153617320-153617608	HepG2	liver:	n/a	chr7:153617469-153617480
35	CEBPB	chr7:153617338-153617636	K562	blood:	n/a	chr7:153617469-153617480
36	CEBPB	chr7:153636771-153636970	K562	blood:	n/a	n/a
37	CHD2	chr7:153653758-153653916	HepG2	liver:	n/a	n/a
38	CHD2	chr7:153526890-153526941	HepG2	liver:	n/a	n/a
39	CHD2	chr7:153583801-153584156	H1-hESC	embryonic stem cell:	n/a	n/a
40	CTBP2	chr7:153583188-153584353	H1-hESC	embryonic stem cell:	n/a	n/a
41	CTCF	chr7:153557380-153557530	K562	blood:	n/a	n/a
42	CTCF	chr7:153706117-153706120	GM10266	blood:	n/a	n/a
43	CTCF	chr7:153687030-153687153	GM12891	blood:	n/a	chr7:153687095-153687108 chr7:153687093-153687111
44	CTCF	chr7:153532360-153532510	HMEC	breast:	n/a	chr7:153532422-153532443 chr7:153532428-153532444 chr7:153532427-153532445
45	CTCF	chr7:153532340-153532490	MCF-7	breast:	n/a	chr7:153532422-153532443 chr7:153532428-153532444 chr7:153532427-153532445
46	CTCF	chr7:153710860-153710912	Kidney_OC	kidney:	n/a	n/a
47	CTCF	chr7:153584321-153584440	Fibrobl	skin:	n/a	n/a
48	CTCF	chr7:153712680-153712830	K562	blood:	n/a	n/a
49	CTCF	chr7:153532332-153532530	LNCaP	prostate:	n/a	chr7:153532422-153532443 chr7:153532428-153532444 chr7:153532427-153532445
50	CTCF	chr7:153645260-153645410	K562	blood:	n/a	chr7:153645329-153645347 chr7:153645330-153645346 chr7:153645332-153645340 chr7:153645331-153645352

(count:1281 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:153584582-153584632	U87	brain:	n/a
2	chr7:153583867-153583917	SKMC	muscle:	n/a
3	chr7:153641242-153641292	LNCaP	prostate:	n/a
4	chr7:153582285-153582335	NT2-D1	testis:	n/a
5	chr7:153584609-153584659	MCF10A-Er-Src	breast:	n/a
6	chr7:153584609-153584659	HEEpiC	esophagus:	n/a
7	chr7:153583867-153583917	HMEC	breast:	n/a
8	chr7:153586130-153586180	T-47D	breast:	n/a
9	chr7:153584873-153584923	MCF10A-Er-Src	breast:	n/a
10	chr7:153586207-153586257	IMR90	lung:	fetal
11	chr7:153584416-153584466	Hela-S3	cervix:	n/a
12	chr7:153582285-153582335	K562	blood:	n/a
13	chr7:153584873-153584923	SK-N-MC	brain:	n/a
14	chr7:153586022-153586072	AG09319	gingival:	n/a
15	chr7:153582285-153582335	SK-N-SH	brain:	n/a
16	chr7:153586207-153586257	HCPEpiC	choroid plexus:	n/a
17	chr7:153583867-153583917	HCPEpiC	choroid plexus:	n/a
18	chr7:153585368-153585418	ProgFib	skin:	n/a
19	chr7:153584597-153584647	HRE	kidney:	n/a
20	chr7:153583318-153583368	HMEC	breast:	n/a
21	chr7:153583563-153583613	Caco-2	colon:	n/a
22	chr7:153584597-153584647	HepG2	liver:	n/a
23	chr7:153584597-153584647	HCM	heart:	n/a
24	chr7:153582285-153582335	Caco-2	colon:	n/a
25	chr7:153584582-153584632	SK-N-SH_RA	brain:	n/a
26	chr7:153584839-153584889	BE2_C	brain:	n/a
27	chr7:153586022-153586072	NHDF-neo	bronchial:	n/a
28	chr7:153585368-153585418	K562	blood:	n/a
29	chr7:153583867-153583917	Hela-S3	cervix:	n/a
30	chr7:153584416-153584466	GM06990	blood:	n/a
31	chr7:153584873-153584923	HUVEC	blood vessel:	n/a
32	chr7:153584597-153584647	HCT-116	colon:	n/a
33	chr7:153584873-153584923	AG04450	lung:	fetal
34	chr7:153579447-153579497	HPAEpiC	pulmonary alveolar:	n/a
35	chr7:153584873-153584923	MCF-7	breast:	n/a
36	chr7:153586022-153586072	AG09309	skin:	n/a
37	chr7:153641307-153641357	GM12892	blood:	n/a
38	chr7:153586130-153586180	HRPEpiC	eye:	n/a
39	chr7:153584609-153584659	NT2-D1	testis:	n/a
40	chr7:153641307-153641357	ProgFib	skin:	n/a
41	chr7:153641307-153641357	PrEC	prostate:	n/a
42	chr7:153584748-153584798	GM19239	blood:	n/a
43	chr7:153585368-153585418	NHDF-neo	bronchial:	n/a
44	chr7:153584416-153584466	HEK293	kidney:	embryo
45	chr7:153579447-153579497	HCM	heart:	n/a
46	chr7:153584597-153584647	LNCaP	prostate:	n/a
47	chr7:153584597-153584647	GM12891	blood:	n/a
48	chr7:153584597-153584647	HMEC	breast:	n/a
49	chr7:153641242-153641292	CMK	blood:	n/a
50	chr7:153586592-153586642	SAEC	small airway:	n/a

(count:42 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:153608416..153610606-chr7:153614763..153616522,2	K562	blood:
2	chr7:153524674..153526933-chr7:153539368..153541510,2	K562	blood:
3	chr7:153527409..153529713-chr7:153538152..153540890,2	K562	blood:
4	chr7:153636379..153638876-chr7:153641967..153644697,4	K562	blood:
5	chr7:153576130..153578324-chr7:153580213..153583011,2	MCF-7	breast:
6	chr7:153106936..153109083-chr7:153612449..153615319,2	K562	blood:
7	chr7:153636605..153638915-chr7:153643180..153645983,3	K562	blood:
8	chr7:152591605..152592124-chr7:153532194..153532836,2	MCF-7	breast:
9	chr7:153646257..153648420-chr7:153652652..153654403,2	K562	blood:
10	chr7:153636379..153638876-chr7:153641967..153644697,4	K562	blood:
11	chr7:153525347..153527049-chr7:153542550..153545512,2	K562	blood:
12	chr7:153528031..153530118-chr7:153531328..153534242,3	K562	blood:
13	chr7:153525347..153527049-chr7:153542550..153545512,2	K562	blood:
14	chr7:153608416..153611349-chr7:153614803..153616522,2	K562	blood:
15	chr7:153646257..153648420-chr7:153652652..153654403,2	K562	blood:
16	chr7:153608416..153610606-chr7:153614763..153616522,2	K562	blood:
17	chr7:153576130..153578324-chr7:153580213..153583011,2	MCF-7	breast:
18	chr7:153078567..153079314-chr7:153528933..153530177,7	MCF-7	breast:
19	chr7:153103427..153106418-chr7:153612695..153615251,3	K562	blood:
20	chr7:153528295..153530118-chr7:153531328..153534242,2	K562	blood:
21	chr7:153524660..153527227-chr7:153530341..153532970,2	K562	blood:
22	chr7:152890055..152890585-chr7:153532359..153532887,2	MCF-7	breast:
23	chr7:153613840..153616509-chr7:153617529..153619976,2	K562	blood:
24	chr7:153630679..153632497-chr7:153633918..153635661,2	K562	blood:
25	chr7:153528295..153530118-chr7:153531328..153534242,2	K562	blood:
26	chr7:153527409..153529713-chr7:153538152..153540890,2	K562	blood:
27	chr7:153102450..153104761-chr7:153532927..153535675,2	K562	blood:
28	chr7:153103492..153105797-chr7:153617476..153620137,2	K562	blood:
29	chr7:153528031..153530118-chr7:153531328..153534242,3	K562	blood:
30	chr7:153535667..153538318-chr7:153542041..153544226,2	K562	blood:
31	chr7:153577342..153579521-chr7:153583996..153586013,2	K562	blood:
32	chr7:153636605..153638915-chr7:153643180..153645983,3	K562	blood:
33	chr7:153613840..153616509-chr7:153617529..153619976,2	K562	blood:
34	chr7:153104450..153106704-chr7:153631945..153634979,3	K562	blood:
35	chr7:153103586..153106568-chr7:153587349..153589344,2	K562	blood:
36	chr7:153630679..153632497-chr7:153633918..153635661,2	K562	blood:
37	chr7:153078275..153079219-chr7:153531525..153532699,6	MCF-7	breast:
38	chr7:153524660..153527227-chr7:153530341..153532970,2	K562	blood:
39	chr7:153608416..153611349-chr7:153614803..153616522,2	K562	blood:
40	chr7:153535667..153538318-chr7:153542041..153544226,2	K562	blood:
41	chr7:153522857..153524871-chr7:153525129..153529297,3	K562	blood:
42	chr7:153524674..153526933-chr7:153539368..153541510,2	K562	blood:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PAXIP1-3	chr7:153721094-153721199	ENSG00000203335.3
2	lnc-PAXIP1-3	chr7:153724009-153724131	ENSG00000203335.3
3	lnc-PAXIP1-3	chr7:153723372-153723775	ENSG00000203335.3
4	lnc-PAXIP1-3	chr7:153724009-153724133	ENSG00000203335.3
5	lnc-PAXIP1-3	chr7:153723665-153723775	ENSG00000203335.3

No data

Variant related genes	Relation type
DPP6	TF binding region
ENSG00000226509	TF binding region
DPP6	CpG island
ENSG00000226509	CpG island
ENSG00000130226	chromatin interactions

Extended variants
information (count: 4707 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:4707 , 50 per page) page: 1 2 3 4 5 6 7 ... 95

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs529060243	chr7:153526807-153526808	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs140360660	chr7:153526817-153526818	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs569251097	chr7:153526907-153526908	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs539863539	chr7:153526919-153526920	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs184831844	chr7:153526920-153526921	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs6969368	chr7:153526957-153526958	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs368572477	chr7:153526987-153526988	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs567182537	chr7:153527029-153527030	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs111255400	chr7:153527043-153527044	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs372344260	chr7:153527053-153527054	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs555604744	chr7:153527077-153527078	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs34386054	chr7:153527099-153527100	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs538257018	chr7:153527105-153527106	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs374333326	chr7:153527107-153527108	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs58772168	chr7:153527150-153527151	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs76515213	chr7:153527182-153527183	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs145340193	chr7:153527198-153527199	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs552602663	chr7:153527241-153527242	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs575236478	chr7:153527270-153527271	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs2622244	chr7:153527304-153527305	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs563903540	chr7:153527306-153527307	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs555283642	chr7:153527319-153527320	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs572844356	chr7:153527366-153527367	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs540544180	chr7:153527410-153527411	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs561920572	chr7:153527449-153527450	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs529150832	chr7:153527540-153527541	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs146454015	chr7:153527547-153527548	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs149021644	chr7:153527562-153527563	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs34051005	chr7:153527578-153527579	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs533248304	chr7:153527587-153527588	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs528637834	chr7:153527589-153527590	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs551825708	chr7:153527595-153527596	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs73161592	chr7:153527629-153527630	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs556280744	chr7:153527642-153527643	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs77853186	chr7:153527693-153527694	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs189101434	chr7:153527703-153527704	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs181550124	chr7:153527710-153527711	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs139552551	chr7:153527756-153527757	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs200728787	chr7:153527767-153527768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs367867804	chr7:153527795-153527796	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs185683914	chr7:153527853-153527854	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs576165535	chr7:153527859-153527860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs543789265	chr7:153527877-153527878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs567615272	chr7:153527926-153527927	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs190928676	chr7:153527943-153527944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs182248401	chr7:153527953-153527954	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs57419086	chr7:153527961-153527962	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs575324894	chr7:153527970-153527971	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs539179429	chr7:153528026-153528027	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs143035006	chr7:153528077-153528078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Hodgkin''s lymphoma	18179710	CNVD
Breast cancer	17603634	CNVD
Urothelial carcinoma	18382360	CNVD
Myelodysplastic syndrome	17634407	CNVD
Multiple myeloma	16461302	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	16864856	CNVD
Autism	20808228	CNVD
Ovarian cancer	21720365	CNVD
Lobular carcinoma	20920651	CNVD
Long-qt syndrome	20920651	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Sudden cardiac death	19188705	CNVD
renal disease	17924346	CNVD
Myelofibrosis	22110671	CNVD
Nasopharyngeal cancer	20548289	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Amyotrophic lateral sclerosis	20685689	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Breast cancer	21509527	CNVD
Pancreatic cancer	17952125	CNVD
Congenital anomalies of the kidney and urinary tract	20605837	CNVD
Breast cancer	22522925	CNVD
Autism	22102821	CNVD
Attention deficit hyperactivity disorder	22138692	CNVD
small cell lung cancer	20016488	CNVD
Chordoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Autism	22495309	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:419 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:153526800-153527000	Enhancers	Colon Smooth Muscle	Colon
2	chr7:153526800-153527600	Enhancers	Rectal Smooth Muscle	rectum
3	chr7:153527000-153532000	Weak transcription	Colon Smooth Muscle	Colon
4	chr7:153527600-153528400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr7:153528400-153529600	Enhancers	Rectal Smooth Muscle	rectum
6	chr7:153529600-153530800	Weak transcription	Rectal Smooth Muscle	rectum
7	chr7:153529800-153530000	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr7:153530800-153531400	Enhancers	Rectal Smooth Muscle	rectum
9	chr7:153531000-153531200	Enhancers	Stomach Smooth Muscle	stomach
10	chr7:153531200-153532800	Weak transcription	Stomach Smooth Muscle	stomach
11	chr7:153531400-153531800	Weak transcription	Rectal Smooth Muscle	rectum
12	chr7:153531800-153532400	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr7:153531800-153533400	Enhancers	Rectal Smooth Muscle	rectum
14	chr7:153532000-153532400	Enhancers	Fetal Kidney	kidney
15	chr7:153532000-153532800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr7:153532000-153533000	Enhancers	Brain Anterior Caudate	brain
17	chr7:153532000-153533200	Enhancers	Duodenum Smooth Muscle	Duodenum
18	chr7:153532000-153533600	Enhancers	Colon Smooth Muscle	Colon
19	chr7:153532400-153532600	Enhancers	Adipose Nuclei	Adipose
20	chr7:153532400-153533200	Active TSS	Pancreatic Islets	Pancreatic Islet
21	chr7:153532400-153540000	Weak transcription	Fetal Kidney	kidney
22	chr7:153532600-153533000	Flanking Active TSS	Adipose Nuclei	Adipose
23	chr7:153532600-153533000	Enhancers	Brain Angular Gyrus	brain
24	chr7:153532600-153533000	Enhancers	Brain Hippocampus Middle	brain
25	chr7:153532600-153533200	Enhancers	Fetal Muscle Leg	muscle
26	chr7:153532800-153533400	Enhancers	Stomach Smooth Muscle	stomach
27	chr7:153533000-153533400	Enhancers	Adipose Nuclei	Adipose
28	chr7:153533200-153533400	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
29	chr7:153533400-153534000	Enhancers	Pancreatic Islets	Pancreatic Islet
30	chr7:153534000-153535600	Weak transcription	Pancreatic Islets	Pancreatic Islet
31	chr7:153535200-153535400	Enhancers	Stomach Smooth Muscle	stomach
32	chr7:153535600-153536000	Enhancers	Pancreatic Islets	Pancreatic Islet
33	chr7:153536000-153537800	Weak transcription	Pancreatic Islets	Pancreatic Islet
34	chr7:153537800-153538200	Active TSS	Pancreatic Islets	Pancreatic Islet
35	chr7:153538200-153538800	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr7:153538800-153539000	Enhancers	Pancreatic Islets	Pancreatic Islet
37	chr7:153540000-153540400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr7:153540000-153540400	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr7:153540000-153540400	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr7:153540000-153540400	Enhancers	Esophagus	oesophagus
41	chr7:153540000-153540400	ZNF genes & repeats	Fetal Kidney	kidney
42	chr7:153540000-153540400	Enhancers	Gastric	stomach
43	chr7:153540000-153540400	ZNF genes & repeats	Pancreas	Pancrea
44	chr7:153540200-153540400	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
45	chr7:153540200-153540600	Active TSS	Fetal Heart	heart
46	chr7:153540400-153541000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr7:153545000-153545200	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
48	chr7:153547400-153547600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr7:153554000-153556200	Enhancers	Pancreatic Islets	Pancreatic Islet
50	chr7:153554600-153556200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links