Variant report

Variant nsv1021340
Chromosome Location chr8:39268667-39577905
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:231 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:39268800-39269200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr8:39269000-39269800 Enhancers H1 Cell Line embryonic stem cell
3 chr8:39269400-39270200 Enhancers Placenta Amnion Placenta Amnion
4 chr8:39272400-39272800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
5 chr8:39272400-39273000 Active TSS K562 blood
6 chr8:39272600-39272800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr8:39272800-39273200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr8:39273200-39273400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr8:39283800-39285200 Enhancers Fetal Lung lung
10 chr8:39296800-39297000 Active TSS HSMM muscle
11 chr8:39297000-39297200 Flanking Active TSS HSMM muscle
12 chr8:39298800-39300000 Enhancers Fetal Lung lung
13 chr8:39300000-39301000 Weak transcription Fetal Lung lung
14 chr8:39301000-39301200 Enhancers Fetal Lung lung
15 chr8:39301200-39302200 Weak transcription Fetal Lung lung
16 chr8:39302000-39302400 Enhancers Spleen Spleen
17 chr8:39302200-39302400 Enhancers Fetal Lung lung
18 chr8:39305400-39306400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr8:39317600-39318000 Enhancers iPS-20b Cell Line embryonic stem cell
20 chr8:39328200-39328600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr8:39328400-39328800 Enhancers H1 Cell Line embryonic stem cell
22 chr8:39328400-39329200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
23 chr8:39328400-39329400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
24 chr8:39328600-39329000 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr8:39328600-39329000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr8:39328600-39329200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr8:39328600-39329400 Active TSS iPS-20b Cell Line embryonic stem cell
28 chr8:39328600-39334800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr8:39328800-39329200 Active TSS H1 Cell Line embryonic stem cell
30 chr8:39328800-39329200 Active TSS iPS-18 Cell Line embryonic stem cell
31 chr8:39329200-39329400 Enhancers H1 Cell Line embryonic stem cell
32 chr8:39329200-39329400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr8:39334800-39335000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr8:39335000-39335800 Enhancers Fetal Lung lung
35 chr8:39335000-39340400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr8:39335400-39336400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
37 chr8:39335600-39337200 Enhancers Cortex derived primary cultured neurospheres brain
38 chr8:39335800-39336400 Flanking Active TSS Fetal Lung lung
39 chr8:39336000-39337200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr8:39336200-39336800 Enhancers HUES48 Cell Line embryonic stem cell
41 chr8:39336200-39337200 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr8:39336200-39337200 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr8:39336400-39337000 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr8:39336400-39337000 Active TSS Fetal Lung lung
45 chr8:39336800-39337200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr8:39338000-39338400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr8:39340400-39341000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr8:39343000-39345400 Enhancers Fetal Lung lung
49 chr8:39363600-39364000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr8:39368800-39369600 Enhancers GM12878-XiMat blood

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