Variant report

Variant	nsv1021743
Chromosome Location	chr6:4382308-4494308
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:971)
CpG islands
(count:549)
Chromatin interactive
region (count:41)
LncRNA
region (count:73)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:971 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:4420426-4420740	K562	blood:	n/a	n/a
2	ARID3A	chr6:4459428-4459682	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:4459423-4459617	K562	blood:	n/a	n/a
4	ATF1	chr6:4382623-4382877	K562	blood:	n/a	n/a
5	ATF1	chr6:4388922-4389146	K562	blood:	n/a	n/a
6	ATF1	chr6:4436128-4436625	K562	blood:	n/a	n/a
7	ATF1	chr6:4387606-4387797	K562	blood:	n/a	n/a
8	ATF1	chr6:4420436-4420836	K562	blood:	n/a	n/a
9	ATF1	chr6:4431662-4431756	K562	blood:	n/a	n/a
10	ATF1	chr6:4435051-4435518	K562	blood:	n/a	n/a
11	ATF1	chr6:4441484-4441571	K562	blood:	n/a	n/a
12	ATF1	chr6:4459328-4459665	K562	blood:	n/a	n/a
13	ATF2	chr6:4407962-4408329	GM12878	blood:	n/a	n/a
14	ATF3	chr6:4487812-4488213	HCT-116	colon:	n/a	n/a
15	ATF3	chr6:4382602-4382869	K562	blood:	n/a	n/a
16	BACH1	chr6:4487858-4488185	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr6:4388962-4389162	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr6:4402693-4402960	K562	blood:	n/a	chr6:4402848-4402862
19	BACH1	chr6:4402639-4403061	H1-hESC	embryonic stem cell:	n/a	chr6:4402848-4402862
20	BATF	chr6:4407963-4408218	GM12878	blood:	n/a	chr6:4408088-4408099
21	BATF	chr6:4407908-4408272	GM12878	blood:	n/a	chr6:4408088-4408099
22	BATF	chr6:4402702-4403013	GM12878	blood:	n/a	chr6:4402851-4402862 chr6:4402852-4402862
23	BATF	chr6:4402678-4402929	GM12878	blood:	n/a	chr6:4402851-4402862 chr6:4402852-4402862
24	BATF	chr6:4475158-4475461	GM12878	blood:	n/a	n/a
25	BCL11A	chr6:4407993-4408322	GM12878	blood:	n/a	n/a
26	BCLAF1	chr6:4408007-4408284	GM12878	blood:	n/a	n/a
27	BCLAF1	chr6:4407905-4408328	GM12878	blood:	n/a	n/a
28	BHLHE40	chr6:4487891-4488080	HepG2	liver:	n/a	n/a
29	BHLHE40	chr6:4420487-4420718	K562	blood:	n/a	n/a
30	BHLHE40	chr6:4408013-4408375	GM12878	blood:	n/a	n/a
31	BHLHE40	chr6:4404118-4404418	K562	blood:	n/a	chr6:4404288-4404297 chr6:4404287-4404296 chr6:4404285-4404298 chr6:4404281-4404302 chr6:4404287-4404296
32	BHLHE40	chr6:4459340-4459597	K562	blood:	n/a	n/a
33	BHLHE40	chr6:4487893-4488073	K562	blood:	n/a	n/a
34	BHLHE40	chr6:4478490-4478595	K562	blood:	n/a	n/a
35	BHLHE40	chr6:4388945-4389115	K562	blood:	n/a	n/a
36	BHLHE40	chr6:4402992-4403270	K562	blood:	n/a	n/a
37	BHLHE40	chr6:4402531-4402707	K562	blood:	n/a	n/a
38	CBX3	chr6:4488398-4489131	HCT-116	colon:	n/a	n/a
39	CBX3	chr6:4488530-4489100	HCT-116	colon:	n/a	n/a
40	CBX3	chr6:4488670-4488959	K562	blood:	n/a	n/a
41	CBX3	chr6:4384289-4384651	K562	blood:	n/a	n/a
42	CBX3	chr6:4488601-4489012	K562	blood:	n/a	n/a
43	CBX3	chr6:4384260-4384748	HCT-116	colon:	n/a	n/a
44	CBX3	chr6:4471754-4472115	K562	blood:	n/a	n/a
45	CBX3	chr6:4384292-4384704	K562	blood:	n/a	n/a
46	CBX3	chr6:4487668-4488356	HCT-116	colon:	n/a	n/a
47	CCNT2	chr6:4382740-4383053	K562	blood:	n/a	n/a
48	CCNT2	chr6:4481632-4481829	K562	blood:	n/a	n/a
49	CEBPB	chr6:4442434-4442787	HepG2	liver:	n/a	chr6:4442609-4442620
50	CEBPB	chr6:4388975-4388987	A549	lung:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:4461158-4461208	HEEpiC	esophagus:	n/a
2	chr6:4403020-4403070	HRPEpiC	eye:	n/a
3	chr6:4483078-4483128	Jurkat	blood:	n/a
4	chr6:4427110-4427160	GM12892	blood:	n/a
5	chr6:4403020-4403070	HUVEC	blood vessel:	n/a
6	chr6:4428712-4428762	HIPEpiC	eye:	n/a
7	chr6:4482990-4483040	AG04449	skin:	fetal
8	chr6:4428712-4428762	HCM	heart:	n/a
9	chr6:4403020-4403070	HCPEpiC	choroid plexus:	n/a
10	chr6:4403020-4403070	HCT-116	colon:	n/a
11	chr6:4482990-4483040	HL-60	blood:	n/a
12	chr6:4482990-4483040	HMEC	breast:	n/a
13	chr6:4427110-4427160	NT2-D1	testis:	n/a
14	chr6:4427110-4427160	AG04449	skin:	fetal
15	chr6:4482883-4482933	NH-A	brain:	n/a
16	chr6:4461158-4461208	NT2-D1	testis:	n/a
17	chr6:4481538-4481588	Caco-2	colon:	n/a
18	chr6:4482990-4483040	U87	brain:	n/a
19	chr6:4461158-4461208	K562	blood:	n/a
20	chr6:4428712-4428762	HNPCEpiC	eye:	n/a
21	chr6:4459669-4459719	IMR90	lung:	fetal
22	chr6:4403020-4403070	ECC-1	luminal epithelium:	n/a
23	chr6:4427110-4427160	Hepatocyte	liver:	n/a
24	chr6:4459669-4459719	HIPEpiC	eye:	n/a
25	chr6:4482990-4483040	NH-A	brain:	n/a
26	chr6:4403020-4403070	AG04450	lung:	fetal
27	chr6:4459669-4459719	K562	blood:	n/a
28	chr6:4482883-4482933	GM12892	blood:	n/a
29	chr6:4403020-4403070	SAEC	small airway:	n/a
30	chr6:4461158-4461208	HMEC	breast:	n/a
31	chr6:4481538-4481588	ECC-1	luminal epithelium:	n/a
32	chr6:4427110-4427160	AG09319	gingival:	n/a
33	chr6:4483078-4483128	HRE	kidney:	n/a
34	chr6:4482990-4483040	NB4	blood:	n/a
35	chr6:4403020-4403070	HCF	heart:	n/a
36	chr6:4428712-4428762	HL-60	blood:	n/a
37	chr6:4483078-4483128	SK-N-MC	brain:	n/a
38	chr6:4427110-4427160	LNCaP	prostate:	n/a
39	chr6:4427110-4427160	HPAEpiC	pulmonary alveolar:	n/a
40	chr6:4482990-4483040	AG09319	gingival:	n/a
41	chr6:4427110-4427160	AG04450	lung:	fetal
42	chr6:4483078-4483128	HAEpiC	amniotic membrane:	n/a
43	chr6:4427110-4427160	A549	lung:	n/a
44	chr6:4403020-4403070	ProgFib	skin:	n/a
45	chr6:4483078-4483128	SK-N-SH_RA	brain:	n/a
46	chr6:4482990-4483040	K562	blood:	n/a
47	chr6:4403020-4403070	NT2-D1	testis:	n/a
48	chr6:4403020-4403070	HRCEpiC	kidney:	n/a
49	chr6:4461158-4461208	PFSK-1	brain:	n/a
50	chr6:4427110-4427160	PFSK-1	brain:	n/a

(count:41 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:4398942..4400523-chr6:4402964..4405624,2	K562	blood:
2	chr6:4423287..4425558-chr6:4426635..4429033,2	K562	blood:
3	chr6:4401718..4402258-chr6:4475763..4476371,2	MCF-7	breast:
4	chr6:4401718..4402258-chr6:4475763..4476371,2	MCF-7	breast:
5	chr6:4432640..4435847-chr6:4435972..4439530,3	MCF-7	breast:
6	chr6:4429968..4432992-chr6:4433898..4437374,3	MCF-7	breast:
7	chr6:4401256..4404324-chr6:4774451..4776953,3	MCF-7	breast:
8	chr6:4489721..4491825-chr6:4493437..4495768,2	MCF-7	breast:
9	chr6:4429968..4432992-chr6:4433898..4437374,3	MCF-7	breast:
10	chr6:4443894..4445765-chr6:4448052..4449778,2	MCF-7	breast:
11	chr6:4458091..4459630-chr6:4459877..4462370,2	MCF-7	breast:
12	chr6:4457494..4459250-chr6:4462928..4465436,2	MCF-7	breast:
13	chr6:4493861..4495559-chr6:4495839..4497666,2	MCF-7	breast:
14	chr6:4473560..4475868-chr6:4477837..4480497,2	MCF-7	breast:
15	chr6:4457494..4459250-chr6:4462928..4465436,2	MCF-7	breast:
16	chr6:4465798..4468788-chr6:4591118..4593386,2	MCF-7	breast:
17	chr6:4401864..4404753-chr6:4405538..4407059,2	MCF-7	breast:
18	chr6:4476053..4476701-chr6:4489878..4490608,2	MCF-7	breast:
19	chr6:4445245..4447675-chr6:4451631..4454250,2	K562	blood:
20	chr6:4488176..4491651-chr6:4775983..4779929,5	MCF-7	breast:
21	chr6:4475754..4476701-chr6:4489829..4490378,2	MCF-7	breast:
22	chr6:4475754..4476701-chr6:4489829..4490378,2	MCF-7	breast:
23	chr6:4445245..4447675-chr6:4451631..4454250,2	K562	blood:
24	chr6:4398942..4400523-chr6:4402964..4405624,2	K562	blood:
25	chr6:4443894..4445765-chr6:4448052..4449778,2	MCF-7	breast:
26	chr6:4324445..4326506-chr6:4412431..4414561,2	MCF-7	breast:
27	chr6:4489721..4491825-chr6:4493437..4495768,2	MCF-7	breast:
28	chr6:4458091..4459630-chr6:4459877..4462370,2	MCF-7	breast:
29	chr6:4473560..4475868-chr6:4477837..4480497,2	MCF-7	breast:
30	chr6:4488735..4490606-chr6:4493086..4495998,2	MCF-7	breast:
31	chr6:4481267..4483998-chr6:4490747..4493178,3	MCF-7	breast:
32	chr6:4365852..4368376-chr6:4465065..4467160,2	MCF-7	breast:
33	chr6:4401864..4404753-chr6:4405538..4407059,2	MCF-7	breast:
34	chr6:4488735..4490606-chr6:4493086..4495998,2	MCF-7	breast:
35	chr6:4475486..4477630-chr6:4774016..4775629,2	MCF-7	breast:
36	chr6:4490287..4491939-chr6:4601250..4603632,2	MCF-7	breast:
37	chr6:4476053..4476701-chr6:4489878..4490608,2	MCF-7	breast:
38	chr6:4432640..4435847-chr6:4435972..4439530,3	MCF-7	breast:
39	chr6:4436749..4438740-chr6:4557869..4560584,2	MCF-7	breast:
40	chr6:4479237..4481357-chr6:4482342..4483965,2	MCF-7	breast:
41	chr6:4479237..4481357-chr6:4482342..4483965,2	MCF-7	breast:

(count:73 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C6orf201-22	chr6:4423935-4424072	NONHSAT107410
2	lnc-C6orf201-20	chr6:4390443-4390705	NONHSAT107417
3	lnc-CDYL-19	chr6:4472090-4472135	NONHSAT107434
4	lnc-C6orf201-21	chr6:4401250-4401464	NONHSAT107419
5	lnc-C6orf201-20	chr6:4382355-4382635	NONHSAT107406
6	lnc-C6orf201-21	chr6:4400384-4400521	NONHSAT107419
7	lnc-C6orf201-20	chr6:4383602-4383650	NONHSAT107406
8	lnc-C6orf201-21	chr6:4405340-4405462	NONHSAT107419
9	lnc-C6orf201-20	chr6:4386777-4387080	NONHSAT107417
10	lnc-C6orf201-21	chr6:4399466-4399769	NONHSAT107419
11	lnc-C6orf201-22	chr6:4425113-4425487	NONHSAT107410
12	lnc-C6orf201-20	chr6:4392903-4393826	NONHSAT107417
13	lnc-CDYL-20	chr6:4451509-4451702	NONHSAT107428
14	lnc-C6orf201-21	chr6:4402757-4403005	NONHSAT107419
15	lnc-C6orf201-20	chr6:4387701-4387838	NONHSAT107417
16	lnc-C6orf201-21	chr6:4395892-4396201	NONHSAT107419
17	lnc-ECI2-3	chr6:4399913-4400113	XLOC_005590
18	lnc-ECI2-9	chr6:4494051-4494083	NONHSAT107438
19	lnc-CDYL-2	chr6:4494116-4495989	XLOC_005141
20	lnc-C6orf201-21	chr6:4402442-4402570	NONHSAT107419
21	lnc-C6orf201-22	chr6:4429137-4430060	NONHSAT107410
22	lnc-CDYL-2	chr6:4492041-4492424	ENSG00000260239.1
23	lnc-C6orf201-21	chr6:4400025-4400116	NONHSAT107419
24	lnc-C6orf201-21	chr6:4396599-4397931	NONHSAT107419
25	lnc-ECI2-9	chr6:4493812-4493933	NONHSAT107438
26	lnc-C6orf201-22	chr6:4423570-4423661	NONHSAT107410
27	lnc-C6orf201-20	chr6:4388879-4389253	NONHSAT107417
28	lnc-C6orf201-22	chr6:4428383-4428687	NONHSAT107410
29	lnc-CDYL-2	chr6:4490201-4490225	XLOC_005141
30	lnc-C6orf201-21	chr6:4401030-4401168	NONHSAT107419
31	lnc-C6orf201-20	chr6:4383203-4383512	NONHSAT107417
32	lnc-CDYL-21	chr6:4417111-4417210	NONHSAT107425
33	lnc-CDYL-21	chr6:4421551-4421814	NONHSAT107425
34	lnc-ECI2-9	chr6:4493430-4493541	NONHSAT107438
35	lnc-C6orf201-20	chr6:4389759-4389887	NONHSAT107417
36	lnc-C6orf201-20	chr6:4383171-4383281	NONHSAT107406
37	lnc-ECI2-9	chr6:4493621-4493716	NONHSAT107438
38	lnc-CDYL-20	chr6:4449786-4449885	NONHSAT107428
39	lnc-CDYL-2	chr6:4492041-4492424	NONHSAT107439
40	lnc-C6orf201-21	chr6:4405580-4406503	NONHSAT107419
41	lnc-CDYL-19	chr6:4475814-4475899	NONHSAT107434
42	lnc-C6orf201-20	chr6:4388567-4388781	NONHSAT107417
43	lnc-C6orf201-20	chr6:4383910-4385242	NONHSAT107417
44	lnc-C6orf201-22	chr6:4425993-4426121	NONHSAT107410
45	lnc-CDYL-19	chr6:4475982-4476035	NONHSAT107434
46	lnc-CDYL-2	chr6:4490914-4491087	XLOC_005141
47	lnc-ECI2-9	chr6:4493033-4493323	NONHSAT107438
48	lnc-C6orf201-20	chr6:4388348-4388486	NONHSAT107417
49	lnc-C6orf201-22	chr6:4426308-4426556	NONHSAT107410
50	lnc-CDYL-2	chr6:4494116-4496003	ENSG00000260239.1

No data

Variant related genes	Relation type
RNA5SP202	TF binding region
ENSG00000260239	TF binding region
RNA5SP202	CpG island
ENSG00000260239	CpG island
ENSG00000260239	chromatin interactions
ENSG00000260673	chromatin interactions
ENSG00000201185	chromatin interactions
ENSG00000236336	chromatin interactions
ENSG00000153046	chromatin interactions

Extended variants
information (count: 4849 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:4849 , 50 per page) page: 1 2 3 4 5 6 7 ... 97

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs545163515	chr6:4382310-4382311	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs567399522	chr6:4382325-4382326	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs117406890	chr6:4382351-4382352	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs552940594	chr6:4382381-4382382	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
5	rs572604051	chr6:4382389-4382390	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
6	rs150753297	chr6:4382425-4382426	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
7	rs558347741	chr6:4382523-4382524	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
8	rs1330780	chr6:4382541-4382542	Weak transcription Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs35964120	chr6:4382576-4382577	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
10	rs1330781	chr6:4382611-4382612	ZNF genes & repeats Weak transcription Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs187125997	chr6:4382616-4382617	ZNF genes & repeats Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
12	rs574089152	chr6:4382647-4382648	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs190428278	chr6:4382649-4382650	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs559722549	chr6:4382680-4382681	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs528338508	chr6:4382731-4382732	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs551248374	chr6:4382755-4382756	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs116121559	chr6:4382786-4382787	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs530614612	chr6:4382804-4382805	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs141851420	chr6:4382805-4382806	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs447920	chr6:4382809-4382810	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs75977832	chr6:4382822-4382823	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs567511950	chr6:4382861-4382862	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs4142083	chr6:4382865-4382866	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs566477280	chr6:4382898-4382899	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs144444366	chr6:4382904-4382905	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs183377110	chr6:4382914-4382915	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs74722147	chr6:4382929-4382930	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs548964854	chr6:4382953-4382954	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs35612165	chr6:4382967-4382968	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs572012312	chr6:4383040-4383041	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs201514420	chr6:4383081-4383082	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs398093955	chr6:4383082-4383083	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs372421470	chr6:4383097-4383098	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs186349832	chr6:4383113-4383114	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs557534282	chr6:4383120-4383121	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs574025212	chr6:4383160-4383161	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs543126373	chr6:4383172-4383173	ZNF genes & repeats Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
38	rs112544805	chr6:4383173-4383174	ZNF genes & repeats Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
39	rs146606116	chr6:4383188-4383189	ZNF genes & repeats Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
40	rs374732736	chr6:4383193-4383194	ZNF genes & repeats Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
41	rs118153723	chr6:4383199-4383200	ZNF genes & repeats Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
42	rs141326165	chr6:4383214-4383215	ZNF genes & repeats Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
43	rs78360677	chr6:4383269-4383270	ZNF genes & repeats Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
44	rs190753072	chr6:4383270-4383271	ZNF genes & repeats Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
45	rs77671822	chr6:4383278-4383279	ZNF genes & repeats Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
46	rs561158299	chr6:4383286-4383287	ZNF genes & repeats Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
47	rs558006	chr6:4383313-4383314	ZNF genes & repeats Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs4142082	chr6:4383332-4383333	ZNF genes & repeats Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs182885933	chr6:4383345-4383346	ZNF genes & repeats Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
50	rs557884	chr6:4383346-4383347	ZNF genes & repeats Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21364760	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
small cell lung cancer	20016488	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
dysmorphism	22105932	CNVD
psychomotor delay	22105932	CNVD
Ovarian cancer	19193619	CNVD
Osteosarcoma	16790693	CNVD
Hepatocellular carcinoma	16750200	CNVD
Schizophrenia	20967226	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD

Chromatin state (count:763 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:4377400-4383200	Enhancers	K562	blood
2	chr6:4379000-4382600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr6:4380200-4382600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:4380800-4383000	Enhancers	Skeletal Muscle Male	skeletal muscle
5	chr6:4381000-4382600	Weak transcription	Fetal Intestine Small	intestine
6	chr6:4381200-4382400	Enhancers	Fetal Heart	heart
7	chr6:4381400-4383200	Enhancers	Left Ventricle	heart
8	chr6:4381800-4382400	Enhancers	HUVEC	blood vessel
9	chr6:4382600-4383200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr6:4382600-4383400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr6:4383000-4388400	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr6:4383200-4384400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
13	chr6:4384200-4384800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr6:4384200-4385000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
15	chr6:4385000-4385400	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr6:4385400-4385800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
17	chr6:4385400-4386400	Enhancers	H1 Cell Line	embryonic stem cell
18	chr6:4385600-4385800	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr6:4385800-4388400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr6:4385800-4389000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr6:4386400-4389000	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr6:4387000-4387200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr6:4387200-4388600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr6:4387800-4389400	Enhancers	Placenta	Placenta
25	chr6:4388400-4389200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr6:4388400-4389400	Enhancers	HUES6 Cell Line	embryonic stem cell
27	chr6:4388400-4389400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:4388400-4389400	Enhancers	Skeletal Muscle Male	skeletal muscle
29	chr6:4388400-4389400	Enhancers	K562	blood
30	chr6:4388400-4389600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr6:4388600-4389000	Enhancers	iPS-20b Cell Line	embryonic stem cell
32	chr6:4388600-4389400	Enhancers	ES-I3 Cell Line	embryonic stem cell
33	chr6:4388600-4389400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr6:4388600-4389400	Enhancers	HUES64 Cell Line	embryonic stem cell
35	chr6:4388600-4389400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr6:4388600-4389400	Enhancers	NHDF-Ad	bronchial
37	chr6:4388600-4389600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr6:4388600-4389600	Enhancers	A549	lung
39	chr6:4388800-4389400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr6:4388800-4389400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr6:4388800-4389400	Enhancers	HUES48 Cell Line	embryonic stem cell
42	chr6:4388800-4389400	Enhancers	iPS-15b Cell Line	embryonic stem cell
43	chr6:4388800-4390000	Enhancers	iPS-18 Cell Line	embryonic stem cell
44	chr6:4389000-4389400	Enhancers	H1 Cell Line	embryonic stem cell
45	chr6:4389000-4389400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr6:4389000-4389400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr6:4389000-4389400	Enhancers	H9 Cell Line	embryonic stem cell
48	chr6:4389000-4389400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
49	chr6:4389200-4389400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
50	chr6:4389400-4390200	Weak transcription	HUES64 Cell Line	embryonic stem cell

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