Variant report

Variant	nsv1022065
Chromosome Location	chr7:104997315-105190662
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4012)
CpG islands
(count:2931)
Chromatin interactive
region (count:250)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:4012 , 50 per page) page: 1 2 3 4 5 6 7 ... 81

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:105162675-105163137	K562	blood:	n/a	n/a
2	ARID3A	chr7:105042910-105043317	K562	blood:	n/a	n/a
3	ARID3A	chr7:105173865-105174045	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:105017364-105017690	K562	blood:	n/a	n/a
5	ARID3A	chr7:105080108-105080325	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:105070221-105070610	HepG2	liver:	n/a	n/a
7	ARID3A	chr7:105006603-105006770	K562	blood:	n/a	n/a
8	ARID3A	chr7:105042035-105042531	K562	blood:	n/a	n/a
9	ARID3A	chr7:104999888-105000102	K562	blood:	n/a	n/a
10	ARID3A	chr7:105141763-105141769	K562	blood:	n/a	n/a
11	ARID3A	chr7:104999428-104999583	K562	blood:	n/a	n/a
12	ARID3A	chr7:105015076-105015149	K562	blood:	n/a	n/a
13	ARID3A	chr7:105070152-105070549	K562	blood:	n/a	n/a
14	ARID3A	chr7:105019839-105020013	K562	blood:	n/a	n/a
15	ARID3A	chr7:105128201-105128752	K562	blood:	n/a	n/a
16	ARID3A	chr7:105008783-105009038	K562	blood:	n/a	n/a
17	ARID3A	chr7:105162532-105162842	HepG2	liver:	n/a	n/a
18	ARID3A	chr7:105028117-105028318	K562	blood:	n/a	n/a
19	ARID3A	chr7:105172276-105172771	K562	blood:	n/a	n/a
20	ARID3A	chr7:105007981-105008379	HepG2	liver:	n/a	n/a
21	ARID3A	chr7:104999465-104999651	HepG2	liver:	n/a	n/a
22	ARID3A	chr7:105039651-105040180	K562	blood:	n/a	n/a
23	ARID3A	chr7:105172230-105172894	HepG2	liver:	n/a	n/a
24	ARID3A	chr7:105029792-105030248	HepG2	liver:	n/a	n/a
25	ARID3A	chr7:105042094-105042482	HepG2	liver:	n/a	n/a
26	ARID3A	chr7:105039898-105040131	HepG2	liver:	n/a	n/a
27	ATF1	chr7:105128345-105128752	K562	blood:	n/a	n/a
28	ATF1	chr7:105007289-105007410	K562	blood:	n/a	n/a
29	ATF1	chr7:105070205-105070516	K562	blood:	n/a	n/a
30	ATF2	chr7:105162441-105162701	H1-hESC	embryonic stem cell:	n/a	n/a
31	ATF2	chr7:105172329-105172807	H1-hESC	embryonic stem cell:	n/a	n/a
32	ATF2	chr7:105172257-105172894	GM12878	blood:	n/a	n/a
33	ATF2	chr7:105171988-105172822	GM12878	blood:	n/a	n/a
34	ATF3	chr7:105162419-105162922	K562	blood:	n/a	chr7:105162516-105162525
35	ATF3	chr7:105162479-105162756	A549	lung:	n/a	chr7:105162516-105162525
36	ATF3	chr7:105172202-105172799	K562	blood:	n/a	n/a
37	BACH1	chr7:105162629-105162935	H1-hESC	embryonic stem cell:	n/a	n/a
38	BACH1	chr7:105028171-105028753	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr7:105103081-105103084	K562	blood:	n/a	n/a
40	BACH1	chr7:105113662-105113870	K562	blood:	n/a	n/a
41	BACH1	chr7:105113653-105113991	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr7:105161884-105162223	H1-hESC	embryonic stem cell:	n/a	n/a
43	BACH1	chr7:105027844-105028042	K562	blood:	n/a	n/a
44	BACH1	chr7:105172426-105172817	H1-hESC	embryonic stem cell:	n/a	n/a
45	BACH1	chr7:105172328-105172846	K562	blood:	n/a	n/a
46	BACH1	chr7:105042903-105043365	K562	blood:	n/a	n/a
47	BACH1	chr7:105029716-105030051	H1-hESC	embryonic stem cell:	n/a	n/a
48	BACH1	chr7:105029014-105029308	H1-hESC	embryonic stem cell:	n/a	n/a
49	BATF	chr7:105172440-105172791	GM12878	blood:	n/a	n/a
50	BATF	chr7:105084864-105085128	GM12878	blood:	n/a	n/a

(count:2931 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:105134734-105134784	HCPEpiC	choroid plexus:	n/a
2	chr7:105173132-105173182	CMK	blood:	n/a
3	chr7:105162855-105162905	K562	blood:	n/a
4	chr7:105134734-105134784	HCPEpiC	choroid plexus:	n/a
5	chr7:105173132-105173182	CMK	blood:	n/a
6	chr7:105162855-105162905	K562	blood:	n/a
7	chr7:105170241-105170291	HPAEpiC	pulmonary alveolar:	n/a
8	chr7:105165592-105165642	SAEC	small airway:	n/a
9	chr7:105029492-105029542	SK-N-MC	brain:	n/a
10	chr7:105030752-105030802	HUVEC	blood vessel:	n/a
11	chr7:105134734-105134784	ProgFib	skin:	n/a
12	chr7:105163736-105163786	LNCaP	prostate:	n/a
13	chr7:105162888-105162938	GM12878	blood:	n/a
14	chr7:105030752-105030802	HEEpiC	esophagus:	n/a
15	chr7:105162577-105162627	A549	lung:	n/a
16	chr7:105026171-105026221	AG09309	skin:	n/a
17	chr7:105026171-105026221	NT2-D1	testis:	n/a
18	chr7:105029125-105029175	HCT-116	colon:	n/a
19	chr7:105176805-105176855	HEEpiC	esophagus:	n/a
20	chr7:105172664-105172714	MCF10A-Er-Src	breast:	n/a
21	chr7:105029485-105029535	SK-N-SH	brain:	n/a
22	chr7:105029499-105029549	GM12878	blood:	n/a
23	chr7:105094993-105095043	GM12878	blood:	n/a
24	chr7:105172403-105172453	HepG2	liver:	n/a
25	chr7:105176805-105176855	NHBE	bronchial:	n/a
26	chr7:105158109-105158159	SK-N-SH	brain:	n/a
27	chr7:105172974-105173024	HL-60	blood:	n/a
28	chr7:105029895-105029945	HCT-116	colon:	n/a
29	chr7:105029385-105029435	NH-A	brain:	n/a
30	chr7:105171843-105171893	LNCaP	prostate:	n/a
31	chr7:105162859-105162909	BJ	skin:	n/a
32	chr7:105028539-105028589	H1-hESC	embryonic stem cell:	embryo
33	chr7:105027541-105027591	HIPEpiC	eye:	n/a
34	chr7:105172520-105172570	BE2_C	brain:	n/a
35	chr7:105094993-105095043	AG09309	skin:	n/a
36	chr7:105165592-105165642	SK-N-MC	brain:	n/a
37	chr7:105170241-105170291	HepG2	liver:	n/a
38	chr7:105171843-105171893	AG09319	gingival:	n/a
39	chr7:105172520-105172570	SK-N-SH_RA	brain:	n/a
40	chr7:105029492-105029542	AG09309	skin:	n/a
41	chr7:105162859-105162909	Jurkat	blood:	n/a
42	chr7:105030168-105030218	HCT-116	colon:	n/a
43	chr7:105162859-105162909	HRPEpiC	eye:	n/a
44	chr7:105029485-105029535	SKMC	muscle:	n/a
45	chr7:105110948-105110998	NB4	blood:	n/a
46	chr7:105029125-105029175	HCF	heart:	n/a
47	chr7:105171843-105171893	Hela-S3	cervix:	n/a
48	chr7:105162859-105162909	PrEC	prostate:	n/a
49	chr7:105162855-105162905	AG04450	lung:	fetal
50	chr7:105097168-105097218	HCT-116	colon:	n/a

(count:250 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr7:105078097..105081437-chr7:105081895..105086252,7	MCF-7	breast:
2	chr7:105139662..105141341-chr7:105152826..105155555,3	K562	blood:
3	chr7:105026529..105029377-chr7:105162488..105165118,2	MCF-7	breast:
4	chr14:20937110..20938110-chr7:105172278..105173069,2	Hela-S3	cervix:
5	chr7:105093737..105097449-chr7:105099816..105103606,4	K562	blood:
6	chr7:105041648..105042543-chr7:105069609..105070839,7	MCF-7	breast:
7	chr7:105147334..105150075-chr7:105152769..105155658,2	K562	blood:
8	chr7:105090469..105092100-chr7:105095217..105096775,2	MCF-7	breast:
9	chr7:105162472..105165455-chr7:105178927..105180868,2	MCF-7	breast:
10	chr7:105007315..105010553-chr7:105026431..105029268,4	MCF-7	breast:
11	chr7:105038088..105039818-chr7:105043302..105044810,2	K562	blood:
12	chr7:105019571..105021474-chr7:105027326..105029018,2	MCF-7	breast:
13	chr7:105164878..105167399-chrX:150160313..150162804,2	MCF-7	breast:
14	chr7:105039517..105040114-chr7:105128184..105128801,2	MCF-7	breast:
15	chr7:105135383..105138778-chr7:105145127..105148143,3	MCF-7	breast:
16	chr1:209957159..209957989-chr7:105162027..105162579,2	Hela-S3	cervix:
17	chr7:104981388..104983616-chr7:105078711..105081522,2	MCF-7	breast:
18	chr7:105039956..105042512-chr7:105104408..105106506,2	K562	blood:
19	chr7:105125271..105127106-chr7:105136833..105138910,2	K562	blood:
20	chr7:105116272..105117859-chr7:105118414..105120932,2	K562	blood:
21	chr7:105083591..105086006-chr7:105160365..105162043,2	K562	blood:
22	chr7:105094953..105097499-chr7:105172737..105175685,2	K562	blood:
23	chr7:104937663..104939344-chr7:105026759..105029557,2	MCF-7	breast:
24	chr7:105083940..105087066-chr7:105087136..105090105,3	K562	blood:
25	chr7:105171071..105173381-chr7:105188092..105190983,2	MCF-7	breast:
26	chr7:105012234..105014245-chr7:105022510..105026066,3	K562	blood:
27	chr7:105139662..105141341-chr7:105152826..105155555,3	K562	blood:
28	chr7:104651667..104654788-chr7:105068823..105071945,3	MCF-7	breast:
29	chr7:105171919..105174630-chr7:105210042..105212382,2	K562	blood:
30	chr7:104653578..104656991-chr7:105040264..105042441,3	MCF-7	breast:
31	chr7:104652388..104654322-chr7:105010095..105012188,2	MCF-7	breast:
32	chr7:104653151..104655346-chr7:105160083..105164134,5	K562	blood:
33	chr7:105171193..105173393-chr7:105516904..105519168,2	K562	blood:
34	chr7:104653054..104655993-chr7:105161169..105164095,3	MCF-7	breast:
35	chr7:105141175..105142796-chr7:105145360..105147513,2	MCF-7	breast:
36	chr7:105155835..105159600-chr7:105160458..105163837,6	MCF-7	breast:
37	chr7:105162283..105162894-chr7:105172462..105173034,2	NB4	blood:
38	chr7:105029252..105029910-chr9:3525726..3526715,2	NB4	blood:
39	chr7:105085032..105086956-chr7:105087073..105088636,2	K562	blood:
40	chr7:105024723..105026503-chr7:105037837..105040106,2	K562	blood:
41	chr7:105013593..105015622-chr7:105026867..105029590,2	K562	blood:
42	chr7:105171405..105173628-chr7:105221272..105223628,2	MCF-7	breast:
43	chr7:105027071..105029412-chr7:105096317..105098709,3	K562	blood:
44	chr7:105143860..105147794-chr7:105158802..105162576,5	K562	blood:
45	chr7:105160687..105164718-chr7:105170642..105174239,14	MCF-7	breast:
46	chr7:105155451..105157293-chr7:105221576..105223932,2	K562	blood:
47	chr7:105108727..105111208-chr7:105115281..105117815,3	K562	blood:
48	chr7:105160261..105165362-chr7:105168599..105174293,22	MCF-7	breast:
49	chr7:105019911..105021910-chr7:105024677..105026313,2	K562	blood:
50	chr7:104757007..104759673-chr7:105027481..105029991,2	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PUS7-1	chr7:105171944-105171973	NONHSAT122623
2	lnc-PUS7-1	chr7:105170677-105170904	NONHSAT122623
3	lnc-RINT1-2	chr7:105170656-105171118	NONHSAT122622
4	lnc-SRPK2-5	chr7:105029691-105029837	NONHSAT122614
5	lnc-CDHR3-5	chr7:105182048-105182302	NONHSAT122624
6	lnc-CDHR3-5	chr7:105182855-105183003	NONHSAT122624
7	lnc-SRPK2-5	chr7:105029095-105029149	NONHSAT122614

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	PUS7	hsa-miR-32-5p	chr7:105098074-105098095
2	PUS7	hsa-miR-155-5p	chr7:105097684-105097705

Variant related genes	Relation type
RINT1	TF binding region
ENSG00000223886	TF binding region
PUS7	TF binding region
SRPK2	TF binding region
RINT1	CpG island
ENSG00000223886	CpG island
PUS7	CpG island
SRPK2	CpG island
ENSG00000237310	chromatin interactions
ENSG00000150753	chromatin interactions
ENSG00000233797	chromatin interactions
ENSG00000072210	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000230508	chromatin interactions
ENSG00000201179	chromatin interactions
ENSG00000223473	chromatin interactions
ENSG00000150756	chromatin interactions
ENSG00000143303	chromatin interactions
ENSG00000174851	chromatin interactions
ENSG00000005483	chromatin interactions
ENSG00000128536	chromatin interactions
ENSG00000272604	chromatin interactions
ENSG00000125503	chromatin interactions
ENSG00000091127	chromatin interactions
ENSG00000198805	chromatin interactions
ENSG00000239569	chromatin interactions
ENSG00000135249	chromatin interactions
ENSG00000185055	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000146776	chromatin interactions
ENSG00000231167	chromatin interactions
ENSG00000143319	chromatin interactions
ENSG00000223886	chromatin interactions
ENSG00000228393	chromatin interactions
ENSG00000162757	chromatin interactions
ENSG00000006125	chromatin interactions
ENSG00000172244	chromatin interactions
ENSG00000099622	chromatin interactions
ENSG00000080298	chromatin interactions
ENSG00000135250	chromatin interactions
ENSG00000014123	chromatin interactions

Extended variants
information (count: 7639 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:7639 , 50 per page) page: 1 2 3 4 5 6 7 ... 153

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs540642628	chr7:104997325-104997326	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs554666920	chr7:104997327-104997328	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs376702282	chr7:104997354-104997355	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs536283522	chr7:104997372-104997373	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs192560285	chr7:104997375-104997376	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs563472871	chr7:104997412-104997413	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs77709841	chr7:104997456-104997457	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs184902553	chr7:104997464-104997465	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs35074269	chr7:104997484-104997485	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs112740781	chr7:104997485-104997486	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs75560787	chr7:104997501-104997502	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs559356283	chr7:104997514-104997515	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs528499316	chr7:104997522-104997523	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs554261368	chr7:104997552-104997553	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs568823124	chr7:104997569-104997570	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs548246443	chr7:104997570-104997571	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs189068988	chr7:104997608-104997609	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs540123280	chr7:104997610-104997611	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs530907671	chr7:104997641-104997642	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs191349173	chr7:104997659-104997660	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs138529171	chr7:104997665-104997666	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs539773236	chr7:104997707-104997708	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs553651656	chr7:104997729-104997730	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs567020740	chr7:104997766-104997767	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs534622459	chr7:104997777-104997778	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs73186102	chr7:104997779-104997780	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs111367988	chr7:104997788-104997789	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs574524451	chr7:104997792-104997793	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs543536536	chr7:104997842-104997843	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs576650781	chr7:104997890-104997891	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs557218362	chr7:104997909-104997910	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs184657919	chr7:104997913-104997914	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs545984843	chr7:104997940-104997941	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs141495018	chr7:104997956-104997957	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs573006056	chr7:104997969-104997970	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs542255144	chr7:104997982-104997983	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs12705306	chr7:104997991-104997992	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs189443332	chr7:104997996-104997997	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs561493133	chr7:104998000-104998001	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs55735534	chr7:104998010-104998011	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs73188303	chr7:104998047-104998048	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs375436908	chr7:104998083-104998084	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs148476426	chr7:104998084-104998085	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs546839158	chr7:104998095-104998096	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs543055149	chr7:104998123-104998124	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs567158048	chr7:104998127-104998128	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs141753352	chr7:104998139-104998140	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs369067068	chr7:104998152-104998153	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs150560512	chr7:104998168-104998169	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs538662681	chr7:104998178-104998179	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Autism	19401682	CNVD
Neuroticism	17667963	CNVD
Prostate cancer	18632612	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	16573809	CNVD
Myxofibrosarcoma	20639860	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Melanoma	20877625	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD

Chromatin state (count:4284 , 50 per page) page: 1 2 3 4 5 6 7 ... 86

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104973200-104998800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:104984000-104999200	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr7:104993000-104997400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr7:104993000-104997400	Enhancers	Primary T helper cells fromperipheralblood	blood
5	chr7:104993000-104997400	Enhancers	Dnd41	blood
6	chr7:104993000-104999000	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr7:104993000-104999200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr7:104993000-104999200	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr7:104993200-104998800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr7:104993400-104999000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr7:104993600-104999200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr7:104993600-105008800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr7:104994600-104999200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr7:104994600-104999600	Enhancers	Primary B cells from peripheral blood	blood
15	chr7:104994600-105004800	Weak transcription	Aorta	Aorta
16	chr7:104994800-104999400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr7:104995000-104999000	Weak transcription	Gastric	stomach
18	chr7:104995000-104999200	Weak transcription	Pancreas	Pancrea
19	chr7:104995000-104999400	Weak transcription	Right Ventricle	heart
20	chr7:104995000-105009000	Weak transcription	Fetal Muscle Trunk	muscle
21	chr7:104995200-104997400	Enhancers	Primary B cells from cord blood	blood
22	chr7:104995200-104998800	Weak transcription	HepG2	liver
23	chr7:104995200-104999000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr7:104995200-104999000	Weak transcription	Lung	lung
25	chr7:104995200-104999200	Weak transcription	A549	lung
26	chr7:104995200-104999400	Weak transcription	Osteobl	bone
27	chr7:104995200-105005000	Weak transcription	Left Ventricle	heart
28	chr7:104995200-105006400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr7:104995200-105007800	Weak transcription	HSMM	muscle
30	chr7:104995200-105009000	Weak transcription	Right Atrium	heart
31	chr7:104995200-105028200	Weak transcription	Esophagus	oesophagus
32	chr7:104995400-105028000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr7:104995600-105027200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr7:104995800-104999200	Weak transcription	NHDF-Ad	bronchial
35	chr7:104995800-105007800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr7:104995800-105027200	Weak transcription	Primary T cells from cord blood	blood
37	chr7:104996000-104999400	Weak transcription	Small Intestine	intestine
38	chr7:104996000-105008800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr7:104996200-104999400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr7:104996400-104999200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
41	chr7:104996400-104999200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr7:104996400-104999400	Weak transcription	Psoas Muscle	Psoas
43	chr7:104996400-105005200	Weak transcription	Skeletal Muscle Male	skeletal muscle
44	chr7:104996400-105017000	Weak transcription	Fetal Muscle Leg	muscle
45	chr7:104996600-104997600	Enhancers	Primary T helper naive cells from peripheral blood	blood
46	chr7:104996600-104999000	Weak transcription	HUES64 Cell Line	embryonic stem cell
47	chr7:104996600-104999000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
48	chr7:104996800-104998200	Weak transcription	K562	blood
49	chr7:104996800-104998800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
50	chr7:104996800-104998800	Weak transcription	Sigmoid Colon	Sigmoid Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links