Variant report
Variant | nsv1022364 |
---|---|
Chromosome Location | chr6:62019939-62877193 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1458)
- CpG islands (count:307)
- Chromatin interactive region (count:24)
- LncRNA region (count:8)
- Mature miRNA region (count: 0)
- miRNA target sites (count:1)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr6:62518943-62519292 | HepG2 | liver: | n/a | n/a |
2 | BACH1 | chr6:62291135-62291160 | K562 | blood: | n/a | n/a |
3 | BACH1 | chr6:62328176-62328215 | K562 | blood: | n/a | n/a |
4 | BACH1 | chr6:62236939-62236976 | H1-hESC | embryonic stem cell: | n/a | n/a |
5 | BACH1 | chr6:62501051-62501180 | K562 | blood: | n/a | n/a |
6 | BATF | chr6:62248793-62249038 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr6:62283970-62284243 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr6:62283972-62284263 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr6:62248776-62249065 | GM12878 | blood: | n/a | n/a |
10 | BCL11A | chr6:62283978-62284284 | GM12878 | blood: | n/a | n/a |
11 | BCL11A | chr6:62283933-62284208 | GM12878 | blood: | n/a | n/a |
12 | BHLHE40 | chr6:62283930-62284249 | HepG2 | liver: | n/a | n/a |
13 | BRCA1 | chr6:62447601-62447670 | GM12878 | blood: | n/a | n/a |
14 | BRCA1 | chr6:62208570-62208943 | Hela-S3 | cervix: | n/a | n/a |
15 | BRCA1 | chr6:62469628-62469639 | HepG2 | liver: | n/a | n/a |
16 | CBX3 | chr6:62667309-62667485 | K562 | blood: | n/a | n/a |
17 | CEBPB | chr6:62825864-62826083 | IMR90 | lung: | n/a | n/a |
18 | CEBPB | chr6:62645680-62645924 | HepG2 | liver: | n/a | chr6:62645793-62645804 |
19 | CEBPB | chr6:62375156-62375272 | H1-hESC | embryonic stem cell: | n/a | chr6:62375214-62375227 |
20 | CEBPB | chr6:62366774-62367019 | A549 | lung: | n/a | chr6:62366900-62366911 chr6:62366838-62366849 |
21 | CEBPB | chr6:62046921-62047170 | HepG2 | liver: | n/a | chr6:62047060-62047073 chr6:62047060-62047073 chr6:62047062-62047071 chr6:62047060-62047071 chr6:62047062-62047073 |
22 | CEBPB | chr6:62859698-62860257 | H1-hESC | embryonic stem cell: | n/a | chr6:62859994-62860002 chr6:62860076-62860093 |
23 | CEBPB | chr6:62415894-62416109 | H1-hESC | embryonic stem cell: | n/a | chr6:62416044-62416055 |
24 | CEBPB | chr6:62690606-62690741 | H1-hESC | embryonic stem cell: | n/a | n/a |
25 | CEBPB | chr6:62645621-62645879 | IMR90 | lung: | n/a | chr6:62645793-62645804 |
26 | CEBPB | chr6:62110212-62110414 | HepG2 | liver: | n/a | chr6:62110257-62110268 |
27 | CEBPB | chr6:62371143-62371454 | HepG2 | liver: | n/a | chr6:62371302-62371313 chr6:62371303-62371312 chr6:62371303-62371312 chr6:62371303-62371312 chr6:62371301-62371312 chr6:62371303-62371312 |
28 | CEBPB | chr6:62650178-62650520 | HepG2 | liver: | n/a | chr6:62650355-62650366 |
29 | CEBPB | chr6:62514108-62514295 | HepG2 | liver: | n/a | chr6:62514202-62514213 |
30 | CEBPB | chr6:62415914-62416204 | HepG2 | liver: | n/a | chr6:62416044-62416055 |
31 | CEBPB | chr6:62859948-62860309 | MCF-7 | breast: | n/a | chr6:62859994-62860002 chr6:62860076-62860093 |
32 | CEBPB | chr6:62753663-62753711 | HepG2 | liver: | n/a | chr6:62753684-62753695 |
33 | CEBPB | chr6:62766627-62766891 | HepG2 | liver: | n/a | chr6:62766803-62766816 |
34 | CEBPB | chr6:62465764-62466017 | MCF-7 | breast: | n/a | chr6:62465871-62465882 |
35 | CEBPB | chr6:62056159-62056270 | A549 | lung: | n/a | chr6:62056191-62056202 |
36 | CEBPB | chr6:62684043-62684372 | HepG2 | liver: | n/a | n/a |
37 | CEBPB | chr6:62670946-62671204 | HepG2 | liver: | n/a | chr6:62671042-62671053 |
38 | CEBPB | chr6:62366757-62367062 | HepG2 | liver: | n/a | chr6:62366900-62366911 chr6:62366838-62366849 |
39 | CEBPB | chr6:62755417-62755748 | HepG2 | liver: | n/a | chr6:62755597-62755610 chr6:62755599-62755608 chr6:62755597-62755608 chr6:62755599-62755608 chr6:62755599-62755608 chr6:62755597-62755610 chr6:62755599-62755608 chr6:62755599-62755610 |
40 | CEBPB | chr6:62765520-62765855 | HepG2 | liver: | n/a | chr6:62765683-62765694 |
41 | CEBPB | chr6:62868080-62868229 | H1-hESC | embryonic stem cell: | n/a | n/a |
42 | CEBPB | chr6:62375116-62375444 | HepG2 | liver: | n/a | chr6:62375274-62375285 chr6:62375214-62375227 |
43 | CEBPB | chr6:62465771-62465944 | K562 | blood: | n/a | chr6:62465871-62465882 |
44 | CEBPB | chr6:62465708-62466033 | H1-hESC | embryonic stem cell: | n/a | chr6:62465871-62465882 |
45 | CEBPB | chr6:62859917-62860272 | Hela-S3 | cervix: | n/a | chr6:62859994-62860002 chr6:62860076-62860093 |
46 | CEBPB | chr6:62648989-62649189 | HepG2 | liver: | n/a | chr6:62649068-62649079 |
47 | CEBPB | chr6:62315823-62315926 | H1-hESC | embryonic stem cell: | n/a | n/a |
48 | CEBPB | chr6:62056047-62056342 | IMR90 | lung: | n/a | chr6:62056191-62056202 |
49 | CEBPB | chr6:62603739-62604059 | HepG2 | liver: | n/a | chr6:62603873-62603884 chr6:62603871-62603882 chr6:62603871-62603884 |
50 | CEBPB | chr6:62859893-62860267 | HepG2 | liver: | n/a | chr6:62859994-62860002 chr6:62860076-62860093 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:62224316-62224366 | PANC-1 | pancreas: | n/a |
2 | chr6:62642433-62642483 | NH-A | brain: | n/a |
3 | chr6:62224316-62224366 | PANC-1 | pancreas: | n/a |
4 | chr6:62642433-62642483 | NH-A | brain: | n/a |
5 | chr6:62284299-62284349 | SK-N-SH_RA | brain: | n/a |
6 | chr6:62596341-62596391 | HCM | heart: | n/a |
7 | chr6:62642433-62642483 | AG04450 | lung: | fetal |
8 | chr6:62737607-62737657 | NT2-D1 | testis: | n/a |
9 | chr6:62284299-62284349 | Hela-S3 | cervix: | n/a |
10 | chr6:62596341-62596391 | HAEpiC | amniotic membrane: | n/a |
11 | chr6:62224316-62224366 | HRCEpiC | kidney: | n/a |
12 | chr6:62596341-62596391 | HRE | kidney: | n/a |
13 | chr6:62642433-62642483 | HepG2 | liver: | n/a |
14 | chr6:62737607-62737657 | HIPEpiC | eye: | n/a |
15 | chr6:62224316-62224366 | K562 | blood: | n/a |
16 | chr6:62224316-62224366 | HCPEpiC | choroid plexus: | n/a |
17 | chr6:62224316-62224366 | NB4 | blood: | n/a |
18 | chr6:62642433-62642483 | BE2_C | brain: | n/a |
19 | chr6:62224316-62224366 | GM12878 | blood: | n/a |
20 | chr6:62284299-62284349 | GM19239 | blood: | n/a |
21 | chr6:62224316-62224366 | HPAEpiC | pulmonary alveolar: | n/a |
22 | chr6:62737607-62737657 | HUVEC | blood vessel: | n/a |
23 | chr6:62224316-62224366 | HEEpiC | esophagus: | n/a |
24 | chr6:62284299-62284349 | ovcar-3 | ovarian: | n/a |
25 | chr6:62284299-62284349 | K562 | blood: | n/a |
26 | chr6:62737607-62737657 | Hepatocyte | liver: | n/a |
27 | chr6:62284299-62284349 | LNCaP | prostate: | n/a |
28 | chr6:62596341-62596391 | PANC-1 | pancreas: | n/a |
29 | chr6:62596341-62596391 | Hela-S3 | cervix: | n/a |
30 | chr6:62642433-62642483 | HPAEpiC | pulmonary alveolar: | n/a |
31 | chr6:62224316-62224366 | AG04449 | skin: | fetal |
32 | chr6:62642433-62642483 | SK-N-MC | brain: | n/a |
33 | chr6:62737607-62737657 | AG10803 | skin: | n/a |
34 | chr6:62596341-62596391 | SKMC | muscle: | n/a |
35 | chr6:62737607-62737657 | HEEpiC | esophagus: | n/a |
36 | chr6:62596341-62596391 | MCF10A-Er-Src | breast: | n/a |
37 | chr6:62737607-62737657 | RPTEC | kidney: | n/a |
38 | chr6:62224316-62224366 | NH-A | brain: | n/a |
39 | chr6:62596341-62596391 | SK-N-MC | brain: | n/a |
40 | chr6:62284299-62284349 | GM06990 | blood: | n/a |
41 | chr6:62596341-62596391 | GM12892 | blood: | n/a |
42 | chr6:62284299-62284349 | HEK293 | kidney: | embryo |
43 | chr6:62737607-62737657 | Hela-S3 | cervix: | n/a |
44 | chr6:62737607-62737657 | CMK | blood: | n/a |
45 | chr6:62737607-62737657 | SK-N-SH_RA | brain: | n/a |
46 | chr6:62224316-62224366 | HL-60 | blood: | n/a |
47 | chr6:62737607-62737657 | HAEpiC | amniotic membrane: | n/a |
48 | chr6:62284299-62284349 | PFSK-1 | brain: | n/a |
49 | chr6:62596341-62596391 | NHBE | bronchial: | n/a |
50 | chr6:62642433-62642483 | IMR90 | lung: | fetal |
(count:24 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:113873972..113874534-chr6:62859704..62860673,2 | MCF-7 | breast: | |
2 | chr6:62519001..62519629-chr6:62859955..62860555,3 | MCF-7 | breast: | |
3 | chr6:62519001..62519629-chr6:62859955..62860555,3 | MCF-7 | breast: | |
4 | chr6:62776601..62778161-chr6:62783168..62785146,2 | K562 | blood: | |
5 | chr6:62545749..62547961-chr6:62548535..62550868,2 | MCF-7 | breast: | |
6 | chr6:62520772..62522597-chr6:62523953..62526303,2 | K562 | blood: | |
7 | chr6:62338455..62341416-chr6:62349346..62350925,2 | K562 | blood: | |
8 | chr6:62338455..62341416-chr6:62349346..62350925,2 | K562 | blood: | |
9 | chr6:62520772..62522597-chr6:62523953..62526303,2 | K562 | blood: | |
10 | chr6:62518763..62519292-chr6:62993656..62994388,2 | MCF-7 | breast: | |
11 | chr6:62761124..62761875-chrX:154244873..154245663,2 | MCF-7 | breast: | |
12 | chr6:62518549..62519303-chr6:63600674..63601315,2 | MCF-7 | breast: | |
13 | chr4:164676002..164676634-chr6:62381037..62381706,2 | MCF-7 | breast: | |
14 | chr1:109802150..109805070-chr6:62296846..62299543,2 | MCF-7 | breast: | |
15 | chr6:62852057..62854070-chr6:62855241..62858140,2 | MCF-7 | breast: | |
16 | chr15:59605919..59608899-chr6:62197305..62198810,2 | MCF-7 | breast: | |
17 | chr6:62852057..62854070-chr6:62855241..62858140,2 | MCF-7 | breast: | |
18 | chr6:62776601..62778161-chr6:62783168..62785146,2 | K562 | blood: | |
19 | chr6:57766644..57767228-chr6:62859661..62860581,2 | MCF-7 | breast: | |
20 | chr6:62621722..62623294-chr6:62626600..62628744,2 | MCF-7 | breast: | |
21 | chr20:45985491..45988318-chr6:62588370..62590548,2 | MCF-7 | breast: | |
22 | chr6:62621722..62623294-chr6:62626600..62628744,2 | MCF-7 | breast: | |
23 | chr6:57445367..57446031-chr6:62860058..62860574,2 | MCF-7 | breast: | |
24 | chr6:62545749..62547961-chr6:62548535..62550868,2 | MCF-7 | breast: |
(count:8 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-KHDRBS2-1 | chr6:62371186-62371274 | NONHSAT113330 |
2 | lnc-KHDRBS2-1 | chr6:62340206-62340406 | NONHSAT113330 |
3 | lnc-KHDRBS2-1 | chr6:62362159-62362222 | NONHSAT113330 |
4 | lnc-KHDRBS2-1 | chr6:62362160-62362222 | XLOC_005755 |
5 | lnc-KHDRBS2-1 | chr6:62369022-62369055 | XLOC_005755 |
6 | lnc-KHDRBS2-1 | chr6:62371187-62371274 | XLOC_005755 |
7 | lnc-KHDRBS2-1 | chr6:62340207-62340406 | XLOC_005755 |
8 | lnc-KHDRBS2-1 | chr6:62369021-62369055 | NONHSAT113330 |
No data |
(count:1 , 50 per page) page:
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No. | miRNA target gene | miRNA name | Chromosome Location | mirBase accession |
---|---|---|---|---|
1 | KHDRBS2 | hsa-miR-335-5p | chr6:62390601-62390623 |
Variant related genes | Relation type |
---|---|
ENSG00000221606 | TF binding region |
MTRNR2L9 | TF binding region |
ENSG00000250686 | TF binding region |
ENSG00000221606 | CpG island |
MTRNR2L9 | CpG island |
ENSG00000250686 | CpG island |
ENSG00000101040 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs9378077 | chr6:62020400-62020401 | Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
2 | rs535534214 | chr6:62020407-62020408 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
3 | rs556736946 | chr6:62020440-62020441 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
4 | rs575310925 | chr6:62020454-62020455 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
5 | rs185047985 | chr6:62020468-62020469 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
6 | rs17151452 | chr6:62020474-62020475 | Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
7 | rs557356860 | chr6:62020485-62020486 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
8 | rs573182156 | chr6:62020500-62020501 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
9 | rs78606585 | chr6:62020506-62020507 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
10 | rs72874193 | chr6:62020524-62020525 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
11 | rs561941679 | chr6:62020532-62020533 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
12 | rs574102816 | chr6:62020577-62020578 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
13 | rs371504553 | chr6:62020580-62020581 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
14 | rs544799018 | chr6:62020593-62020594 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
15 | rs562808197 | chr6:62020608-62020609 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
16 | rs188143461 | chr6:62020616-62020617 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
17 | rs551777953 | chr6:62020657-62020658 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
18 | rs180872432 | chr6:62020658-62020659 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
19 | rs565833027 | chr6:62020672-62020673 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
20 | rs528388745 | chr6:62020681-62020682 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
21 | rs553387394 | chr6:62020684-62020685 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
22 | rs115841937 | chr6:62020705-62020706 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
23 | rs186119729 | chr6:62020721-62020722 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
24 | rs550772011 | chr6:62020725-62020726 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
25 | rs557852550 | chr6:62020767-62020768 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
26 | rs568836740 | chr6:62020776-62020777 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
27 | rs189405525 | chr6:62020783-62020784 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
28 | rs367701245 | chr6:62020795-62020796 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
29 | rs557320255 | chr6:62020796-62020797 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
30 | rs566177569 | chr6:62020802-62020803 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
31 | rs377376872 | chr6:62020813-62020814 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
32 | rs73756744 | chr6:62020821-62020822 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
33 | rs574292326 | chr6:62020829-62020830 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
34 | rs537884232 | chr6:62020830-62020831 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
35 | rs557773466 | chr6:62020831-62020832 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
36 | rs578022342 | chr6:62020865-62020866 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
37 | rs545562332 | chr6:62020884-62020885 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
38 | rs570062305 | chr6:62020925-62020926 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
39 | rs75200619 | chr6:62020926-62020927 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
40 | rs1414783 | chr6:62020941-62020942 | Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
41 | rs533845859 | chr6:62020950-62020951 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
42 | rs543055940 | chr6:62020954-62020955 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
43 | rs376695936 | chr6:62020959-62020960 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
44 | rs555906153 | chr6:62020978-62020979 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
45 | rs182491216 | chr6:62020986-62020987 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
46 | rs529212143 | chr6:62020995-62020996 | Active TSS | n/a | n/a | Overlapped CNVs | n/a |
47 | rs374974755 | chr6:62032203-62032204 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs544963101 | chr6:62032217-62032218 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs74519321 | chr6:62032227-62032228 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs113929979 | chr6:62032228-62032229 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Wilms tumour | 21544195 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Biliary cancer | 19435499 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Malaria | 21533027 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Autism | 21448237 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Autism | 22495311 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastric cancer | 17908304 | CNVD |
Biliary cancer | 20360734 | CNVD |
Breast cancer | 20360734 | CNVD |
Coronary artery disease | 20360734 | CNVD |
Crohn''s disease | 20360734 | CNVD |
Hypertension | 20360734 | CNVD |
Rheumatoid arthritis | 20360734 | CNVD |
Type 1 diabetes | 20360734 | CNVD |
Type 2 diabetes | 20360734 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Breast cancer | 17603634 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Systemic lupus erythematosus | 17503323 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Cancer | 21637783 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Lung cancer | 19547694 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Follicular lymphoma | 19010834 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Phyllodes tumor | 17334353 | CNVD |
Breast cancer | 16608533 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Prostate cancer | 16705090 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Ependymoma | 16718352 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Intracranial tumor | 16823260 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Breast cancer | 21364760 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Schizophrenia | 23813976 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Schizophrenia | 20967226 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Medulloblastoma | 21163964 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Autism | 19492091 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:62020400-62021000 | Active TSS | Fetal Heart | heart |
2 | chr6:62032200-62033600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr6:62032200-62033800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
4 | chr6:62033200-62033400 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin01 | Skin |
5 | chr6:62038800-62039200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
6 | chr6:62043800-62045000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
7 | chr6:62044800-62045400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
8 | chr6:62054800-62055000 | Active TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
9 | chr6:62055000-62059600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
10 | chr6:62059400-62059800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
11 | chr6:62059400-62060000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
12 | chr6:62059400-62060000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
13 | chr6:62059400-62060000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
14 | chr6:62059600-62059800 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
15 | chr6:62059800-62065200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
16 | chr6:62062200-62062600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
17 | chr6:62074000-62074400 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
18 | chr6:62088000-62088800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
19 | chr6:62088200-62088600 | Enhancers | H1 Cell Line | embryonic stem cell |
20 | chr6:62103400-62103600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
21 | chr6:62178600-62179800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
22 | chr6:62178600-62180600 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
23 | chr6:62178600-62182000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
24 | chr6:62178800-62182400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
25 | chr6:62179000-62180400 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
26 | chr6:62181600-62182200 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
27 | chr6:62181800-62185800 | ZNF genes & repeats | Liver | Liver |
28 | chr6:62182000-62182400 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
29 | chr6:62184000-62184800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
30 | chr6:62184000-62185400 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
31 | chr6:62184200-62185800 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
32 | chr6:62187000-62188000 | ZNF genes & repeats | Adipose Nuclei | Adipose |
33 | chr6:62187200-62188000 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
34 | chr6:62187200-62190400 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
35 | chr6:62187400-62197200 | ZNF genes & repeats | Liver | Liver |
36 | chr6:62187800-62188400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
37 | chr6:62189000-62190200 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
38 | chr6:62189200-62189800 | ZNF genes & repeats | Pancreas | Pancrea |
39 | chr6:62189200-62192400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
40 | chr6:62192600-62194800 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
41 | chr6:62196000-62197000 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
42 | chr6:62197000-62199600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
43 | chr6:62198200-62204200 | ZNF genes & repeats | Liver | Liver |
44 | chr6:62198600-62207400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
45 | chr6:62200000-62200200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
46 | chr6:62201600-62202400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
47 | chr6:62201800-62202200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
48 | chr6:62201800-62202400 | Active TSS | Right Atrium | heart |
49 | chr6:62202400-62206200 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
50 | chr6:62205600-62213400 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |