Variant report

Variant	nsv1022858
Chromosome Location	chr8:47411299-47454051
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2391 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:2391 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs117172411	chr8:47411328-47411329	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs561425942	chr8:47411367-47411368	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs147209999	chr8:47411368-47411369	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs201514104	chr8:47411387-47411388	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs543698661	chr8:47411397-47411398	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs113557148	chr8:47411399-47411400	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs139582342	chr8:47411401-47411402	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs561402076	chr8:47411417-47411418	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs183078293	chr8:47411431-47411432	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs187097771	chr8:47411438-47411439	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs149714254	chr8:47411451-47411452	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs548561614	chr8:47411461-47411462	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs568307441	chr8:47411465-47411466	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs370111117	chr8:47411469-47411470	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs530820693	chr8:47411485-47411486	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs550389081	chr8:47411496-47411497	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs191152879	chr8:47411501-47411502	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs563148428	chr8:47411526-47411527	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs183753303	chr8:47411542-47411543	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs539214314	chr8:47411547-47411548	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs187687504	chr8:47411555-47411556	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs566514808	chr8:47411571-47411572	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs530162347	chr8:47411587-47411588	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs535150396	chr8:47411630-47411631	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs555332439	chr8:47411646-47411647	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs78616159	chr8:47411647-47411648	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs148848631	chr8:47411667-47411668	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs577526643	chr8:47411677-47411678	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs546376567	chr8:47411680-47411681	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs546955036	chr8:47411683-47411684	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs566792280	chr8:47411766-47411767	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs559936269	chr8:47411786-47411787	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs576826523	chr8:47411793-47411794	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs539336405	chr8:47411803-47411804	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs10107807	chr8:47411819-47411820	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs146425440	chr8:47411822-47411823	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs538407785	chr8:47411823-47411824	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs140761628	chr8:47411824-47411825	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs570643104	chr8:47411862-47411863	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs193297399	chr8:47411968-47411969	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs145905840	chr8:47411981-47411982	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs532965126	chr8:47411988-47411989	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs546386020	chr8:47412003-47412004	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs151110427	chr8:47412014-47412015	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs185120184	chr8:47412027-47412028	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs555096675	chr8:47412032-47412033	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs141062479	chr8:47412034-47412035	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs573665844	chr8:47412040-47412041	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs12550279	chr8:47412051-47412052	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs557695481	chr8:47412054-47412055	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Oral cancer	21386901	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Lung cancer	18438408	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
abnormal development	18461090	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Medulloblastoma	20607354	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	20409316	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Tetralogy of Fallot	22912587	CNVD

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:47409000-47427000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:47412600-47424200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
3	chr8:47412600-47424800	ZNF genes & repeats	Liver	Liver
4	chr8:47414600-47418200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
5	chr8:47416000-47425400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
6	chr8:47416800-47419600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
7	chr8:47424200-47425200	ZNF genes & repeats	Adipose Nuclei	Adipose
8	chr8:47428600-47429200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
9	chr8:47429400-47434600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
10	chr8:47429400-47436600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr8:47437000-47440600	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
12	chr8:47441200-47454400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr8:47443000-47444800	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
14	chr8:47446000-47448200	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
15	chr8:47446200-47447400	Active TSS	Fetal Heart	heart
16	chr8:47453400-47456600	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links