Variant report

Variant nsv1023842
Chromosome Location chr5:104225365-104268400
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:104234400-104235200 Enhancers Placenta Amnion Placenta Amnion
2 chr5:104235800-104236400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:104235800-104236600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
4 chr5:104236000-104236400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
5 chr5:104236000-104236600 Enhancers Cortex derived primary cultured neurospheres brain
6 chr5:104236000-104237800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr5:104236200-104236800 Enhancers Brain Anterior Caudate brain
8 chr5:104236200-104237000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr5:104237800-104245400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr5:104239600-104240600 Enhancers A549 lung
11 chr5:104240200-104240800 Enhancers HepG2 liver
12 chr5:104243000-104243200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
13 chr5:104243200-104245400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr5:104245400-104246800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr5:104245400-104247200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
16 chr5:104245600-104246400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr5:104245600-104246600 Enhancers Hela-S3 cervix
18 chr5:104245600-104247800 Active TSS A549 lung
19 chr5:104245800-104246200 Enhancers NHEK skin
20 chr5:104245800-104247600 Enhancers HMEC breast
21 chr5:104246000-104246600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr5:104246000-104247000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr5:104246200-104246600 Enhancers ES-WA7 Cell Line embryonic stem cell
24 chr5:104246200-104247000 Flanking Active TSS NHEK skin
25 chr5:104246400-104246600 Enhancers HUES6 Cell Line embryonic stem cell
26 chr5:104246400-104246600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr5:104246400-104247600 Active TSS ES-I3 Cell Line embryonic stem cell
28 chr5:104246600-104246800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
29 chr5:104246600-104246800 Flanking Active TSS Hela-S3 cervix
30 chr5:104246600-104247000 Enhancers HUES48 Cell Line embryonic stem cell
31 chr5:104246600-104247000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr5:104246800-104247000 Enhancers HUES6 Cell Line embryonic stem cell
33 chr5:104246800-104247000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
34 chr5:104246800-104247200 Active TSS Hela-S3 cervix
35 chr5:104247000-104247200 Active TSS HUES6 Cell Line embryonic stem cell
36 chr5:104247000-104247200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr5:104247000-104247200 Enhancers NHEK skin
38 chr5:104247000-104247400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
39 chr5:104247200-104247800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr5:104247400-104247600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr5:104247800-104250400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr5:104249400-104251600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr5:104249600-104250000 Enhancers Fetal Brain Male brain
44 chr5:104249600-104251000 Enhancers Brain Germinal Matrix brain
45 chr5:104250400-104251000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr5:104250800-104251400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr5:104255800-104256200 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr5:104260000-104260800 Enhancers Fetal Intestine Large intestine
49 chr5:104264600-104265200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
50 chr5:104265200-104268200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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