Variant report

Variant nsv1024414
Chromosome Location chr6:3862744-3898734
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:649 , 50 per page) page: 1 2 3 4 5 6 7 ... 13
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:3855000-3869600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:3861400-3862800 Enhancers HUES6 Cell Line embryonic stem cell
3 chr6:3861400-3863000 Enhancers iPS-18 Cell Line embryonic stem cell
4 chr6:3861600-3862800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr6:3862000-3862800 Enhancers iPS-20b Cell Line embryonic stem cell
6 chr6:3862000-3863000 Enhancers H1 Cell Line embryonic stem cell
7 chr6:3862000-3865000 Weak transcription HepG2 liver
8 chr6:3862200-3862800 Enhancers HUES64 Cell Line embryonic stem cell
9 chr6:3862200-3863000 Enhancers HUES48 Cell Line embryonic stem cell
10 chr6:3862200-3868600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr6:3862400-3867400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr6:3862600-3867400 Weak transcription NHEK skin
13 chr6:3862800-3867200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:3865000-3865200 Enhancers HepG2 liver
15 chr6:3865800-3866000 Active TSS Gastric stomach
16 chr6:3866000-3869600 Weak transcription Gastric stomach
17 chr6:3867200-3867400 Enhancers Fetal Muscle Trunk muscle
18 chr6:3867200-3867600 Enhancers Primary T helper 17 cells PMA-I stimulated --
19 chr6:3867200-3868200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
20 chr6:3867200-3868200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
21 chr6:3867200-3868600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:3867200-3869600 Enhancers Fetal Intestine Large intestine
23 chr6:3867200-3869600 Enhancers Fetal Intestine Small intestine
24 chr6:3867200-3871400 Enhancers Stomach Mucosa stomach
25 chr6:3867400-3867600 Enhancers Esophagus oesophagus
26 chr6:3867400-3868800 Enhancers NHEK skin
27 chr6:3867400-3869200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:3867600-3867800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr6:3867600-3867800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
30 chr6:3867600-3868000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr6:3867600-3868000 Enhancers Osteobl bone
32 chr6:3867600-3868200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr6:3867600-3868200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr6:3867600-3868200 Enhancers Muscle Satellite Cultured Cells --
35 chr6:3867600-3868200 Enhancers NHDF-Ad bronchial
36 chr6:3867600-3869200 Enhancers Small Intestine intestine
37 chr6:3867600-3870200 Enhancers Fetal Muscle Leg muscle
38 chr6:3867600-3870600 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr6:3867600-3871200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
40 chr6:3867800-3868200 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr6:3867800-3868800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:3867800-3868800 Enhancers Primary T helper naive cells from peripheral blood blood
43 chr6:3867800-3869200 Enhancers HMEC breast
44 chr6:3867800-3869400 Enhancers Brain Hippocampus Middle brain
45 chr6:3868000-3868200 Enhancers Brain Germinal Matrix brain
46 chr6:3868000-3868200 Enhancers Rectal Mucosa Donor 31 rectum
47 chr6:3868000-3868600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr6:3868000-3869000 Flanking Active TSS Osteobl bone
49 chr6:3868000-3869600 Enhancers A549 lung
50 chr6:3868000-3869800 Enhancers Cortex derived primary cultured neurospheres brain

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