Variant report
Variant | nsv1024414 |
---|---|
Chromosome Location | chr6:3862744-3898734 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:3855000-3869600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
2 | chr6:3861400-3862800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
3 | chr6:3861400-3863000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
4 | chr6:3861600-3862800 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
5 | chr6:3862000-3862800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
6 | chr6:3862000-3863000 | Enhancers | H1 Cell Line | embryonic stem cell |
7 | chr6:3862000-3865000 | Weak transcription | HepG2 | liver |
8 | chr6:3862200-3862800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
9 | chr6:3862200-3863000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
10 | chr6:3862200-3868600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
11 | chr6:3862400-3867400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
12 | chr6:3862600-3867400 | Weak transcription | NHEK | skin |
13 | chr6:3862800-3867200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
14 | chr6:3865000-3865200 | Enhancers | HepG2 | liver |
15 | chr6:3865800-3866000 | Active TSS | Gastric | stomach |
16 | chr6:3866000-3869600 | Weak transcription | Gastric | stomach |
17 | chr6:3867200-3867400 | Enhancers | Fetal Muscle Trunk | muscle |
18 | chr6:3867200-3867600 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
19 | chr6:3867200-3868200 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
20 | chr6:3867200-3868200 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
21 | chr6:3867200-3868600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
22 | chr6:3867200-3869600 | Enhancers | Fetal Intestine Large | intestine |
23 | chr6:3867200-3869600 | Enhancers | Fetal Intestine Small | intestine |
24 | chr6:3867200-3871400 | Enhancers | Stomach Mucosa | stomach |
25 | chr6:3867400-3867600 | Enhancers | Esophagus | oesophagus |
26 | chr6:3867400-3868800 | Enhancers | NHEK | skin |
27 | chr6:3867400-3869200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
28 | chr6:3867600-3867800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
29 | chr6:3867600-3867800 | Flanking Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
30 | chr6:3867600-3868000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
31 | chr6:3867600-3868000 | Enhancers | Osteobl | bone |
32 | chr6:3867600-3868200 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
33 | chr6:3867600-3868200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
34 | chr6:3867600-3868200 | Enhancers | Muscle Satellite Cultured Cells | -- |
35 | chr6:3867600-3868200 | Enhancers | NHDF-Ad | bronchial |
36 | chr6:3867600-3869200 | Enhancers | Small Intestine | intestine |
37 | chr6:3867600-3870200 | Enhancers | Fetal Muscle Leg | muscle |
38 | chr6:3867600-3870600 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
39 | chr6:3867600-3871200 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
40 | chr6:3867800-3868200 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
41 | chr6:3867800-3868800 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
42 | chr6:3867800-3868800 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
43 | chr6:3867800-3869200 | Enhancers | HMEC | breast |
44 | chr6:3867800-3869400 | Enhancers | Brain Hippocampus Middle | brain |
45 | chr6:3868000-3868200 | Enhancers | Brain Germinal Matrix | brain |
46 | chr6:3868000-3868200 | Enhancers | Rectal Mucosa Donor 31 | rectum |
47 | chr6:3868000-3868600 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
48 | chr6:3868000-3869000 | Flanking Active TSS | Osteobl | bone |
49 | chr6:3868000-3869600 | Enhancers | A549 | lung |
50 | chr6:3868000-3869800 | Enhancers | Cortex derived primary cultured neurospheres | brain |