Variant report
Variant | nsv1026234 |
---|---|
Chromosome Location | chr6:86745200-87640200 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2177)
- CpG islands (count:734)
- Chromatin interactive region (count:71)
- LncRNA region (count:9)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr6:87394843-87395342 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr6:87392792-87393956 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr6:87566680-87567004 | HepG2 | liver: | n/a | n/a |
4 | ARID3A | chr6:87535126-87535556 | HepG2 | liver: | n/a | n/a |
5 | ARID3A | chr6:86965769-86966016 | HepG2 | liver: | n/a | n/a |
6 | ARID3A | chr6:87566708-87567012 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr6:87392891-87393627 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr6:86919119-86919208 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr6:87410117-87410320 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr6:87394954-87395205 | K562 | blood: | n/a | n/a |
11 | ATF3 | chr6:86901866-86902226 | H1-hESC | embryonic stem cell: | n/a | n/a |
12 | ATF3 | chr6:86901939-86902219 | H1-hESC | embryonic stem cell: | n/a | n/a |
13 | BACH1 | chr6:87187567-87187831 | H1-hESC | embryonic stem cell: | n/a | n/a |
14 | BACH1 | chr6:86901914-86902069 | H1-hESC | embryonic stem cell: | n/a | n/a |
15 | BACH1 | chr6:86898846-86898863 | H1-hESC | embryonic stem cell: | n/a | n/a |
16 | BACH1 | chr6:87347416-87347417 | K562 | blood: | n/a | n/a |
17 | BCL11A | chr6:87198812-87199065 | H1-hESC | embryonic stem cell: | n/a | n/a |
18 | BCL11A | chr6:87466373-87466627 | H1-hESC | embryonic stem cell: | n/a | n/a |
19 | BHLHE40 | chr6:87530476-87530779 | GM12878 | blood: | n/a | n/a |
20 | BHLHE40 | chr6:87225876-87226119 | GM12878 | blood: | n/a | chr6:87225988-87226001 chr6:87225984-87226005 chr6:87225990-87225999 chr6:87225989-87225998 chr6:87225990-87225999 chr6:87225991-87226000 |
21 | BHLHE40 | chr6:87394959-87395310 | K562 | blood: | n/a | n/a |
22 | BHLHE40 | chr6:87392836-87393518 | K562 | blood: | n/a | n/a |
23 | BHLHE40 | chr6:86901978-86902056 | GM12878 | blood: | n/a | n/a |
24 | BRCA1 | chr6:86779162-86779163 | HepG2 | liver: | n/a | n/a |
25 | BRCA1 | chr6:87368528-87368609 | Hela-S3 | cervix: | n/a | n/a |
26 | CBX3 | chr6:87382089-87382437 | K562 | blood: | n/a | n/a |
27 | CBX3 | chr6:87469730-87470014 | K562 | blood: | n/a | n/a |
28 | CBX3 | chr6:87392924-87393577 | K562 | blood: | n/a | n/a |
29 | CBX3 | chr6:87392934-87393686 | K562 | blood: | n/a | n/a |
30 | CBX3 | chr6:87382079-87382469 | K562 | blood: | n/a | n/a |
31 | CBX3 | chr6:87302409-87302725 | K562 | blood: | n/a | n/a |
32 | CCNT2 | chr6:87462269-87462510 | K562 | blood: | n/a | n/a |
33 | CCNT2 | chr6:87392719-87393684 | K562 | blood: | n/a | n/a |
34 | CCNT2 | chr6:86922703-86922903 | K562 | blood: | n/a | n/a |
35 | CCNT2 | chr6:87242777-87242902 | K562 | blood: | n/a | n/a |
36 | CEBPB | chr6:87296212-87296438 | K562 | blood: | n/a | chr6:87296422-87296433 chr6:87296299-87296310 chr6:87296301-87296310 |
37 | CEBPB | chr6:87244647-87244993 | IMR90 | lung: | n/a | chr6:87244814-87244825 |
38 | CEBPB | chr6:87433402-87433967 | MCF-7 | breast: | n/a | n/a |
39 | CEBPB | chr6:87392704-87393593 | K562 | blood: | n/a | n/a |
40 | CEBPB | chr6:86965804-86966004 | HepG2 | liver: | n/a | n/a |
41 | CEBPB | chr6:87209873-87210165 | HepG2 | liver: | n/a | chr6:87210019-87210030 |
42 | CEBPB | chr6:87487584-87487974 | MCF-7 | breast: | n/a | chr6:87487835-87487846 |
43 | CEBPB | chr6:86889432-86889622 | HepG2 | liver: | n/a | chr6:86889487-86889498 |
44 | CEBPB | chr6:87486237-87486275 | A549 | lung: | n/a | chr6:87486256-87486269 |
45 | CEBPB | chr6:87419909-87420217 | HepG2 | liver: | n/a | chr6:87420024-87420035 |
46 | CEBPB | chr6:87127208-87127411 | A549 | lung: | n/a | chr6:87127280-87127293 chr6:87127280-87127291 |
47 | CEBPB | chr6:87201396-87201550 | HepG2 | liver: | n/a | n/a |
48 | CEBPB | chr6:87419910-87420164 | IMR90 | lung: | n/a | chr6:87420024-87420035 |
49 | CEBPB | chr6:87245888-87246209 | HepG2 | liver: | n/a | chr6:87246039-87246050 |
50 | CEBPB | chr6:87456275-87456563 | HepG2 | liver: | n/a | chr6:87456436-87456447 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:87380671-87380721 | LNCaP | prostate: | n/a |
2 | chr6:87380671-87380721 | GM12891 | blood: | n/a |
3 | chr6:87380671-87380721 | LNCaP | prostate: | n/a |
4 | chr6:87380671-87380721 | GM12891 | blood: | n/a |
5 | chr6:87607744-87607794 | GM12878 | blood: | n/a |
6 | chr6:87196595-87196645 | PrEC | prostate: | n/a |
7 | chr6:86862059-86862109 | HCT-116 | colon: | n/a |
8 | chr6:87041914-87041964 | Jurkat | blood: | n/a |
9 | chr6:86862059-86862109 | CMK | blood: | n/a |
10 | chr6:87607744-87607794 | SK-N-SH_RA | brain: | n/a |
11 | chr6:87607161-87607211 | NB4 | blood: | n/a |
12 | chr6:87380671-87380721 | Hela-S3 | cervix: | n/a |
13 | chr6:87607178-87607228 | HPAEpiC | pulmonary alveolar: | n/a |
14 | chr6:87607161-87607211 | NH-A | brain: | n/a |
15 | chr6:87222174-87222224 | HCF | heart: | n/a |
16 | chr6:87222174-87222224 | K562 | blood: | n/a |
17 | chr6:87380671-87380721 | SK-N-SH | brain: | n/a |
18 | chr6:87607655-87607705 | GM19239 | blood: | n/a |
19 | chr6:86862059-86862109 | HAEpiC | amniotic membrane: | n/a |
20 | chr6:87380615-87380665 | HCT-116 | colon: | n/a |
21 | chr6:87196595-87196645 | GM06990 | blood: | n/a |
22 | chr6:87607178-87607228 | Hepatocyte | liver: | n/a |
23 | chr6:87380615-87380665 | GM12892 | blood: | n/a |
24 | chr6:87607195-87607245 | AG10803 | skin: | n/a |
25 | chr6:86862059-86862109 | NB4 | blood: | n/a |
26 | chr6:87607744-87607794 | AG10803 | skin: | n/a |
27 | chr6:86862059-86862109 | MCF-7 | breast: | n/a |
28 | chr6:87380671-87380721 | HIPEpiC | eye: | n/a |
29 | chr6:87607744-87607794 | U87 | brain: | n/a |
30 | chr6:87607178-87607228 | SK-N-SH | brain: | n/a |
31 | chr6:87607195-87607245 | HCF | heart: | n/a |
32 | chr6:87380615-87380665 | Caco-2 | colon: | n/a |
33 | chr6:87041914-87041964 | HEEpiC | esophagus: | n/a |
34 | chr6:87380615-87380665 | NHDF-neo | bronchial: | n/a |
35 | chr6:86862059-86862109 | SAEC | small airway: | n/a |
36 | chr6:87607178-87607228 | AG10803 | skin: | n/a |
37 | chr6:87380671-87380721 | A549 | lung: | n/a |
38 | chr6:87607195-87607245 | LNCaP | prostate: | n/a |
39 | chr6:87196595-87196645 | AG09319 | gingival: | n/a |
40 | chr6:87380671-87380721 | HEEpiC | esophagus: | n/a |
41 | chr6:86862059-86862109 | NT2-D1 | testis: | n/a |
42 | chr6:87607744-87607794 | T-47D | breast: | n/a |
43 | chr6:87196595-87196645 | HAEpiC | amniotic membrane: | n/a |
44 | chr6:87222174-87222224 | GM12892 | blood: | n/a |
45 | chr6:87607161-87607211 | AG09309 | skin: | n/a |
46 | chr6:87607195-87607245 | AG04449 | skin: | fetal |
47 | chr6:87380615-87380665 | BJ | skin: | n/a |
48 | chr6:87607161-87607211 | H1-hESC | embryonic stem cell: | embryo |
49 | chr6:86862059-86862109 | ovcar-3 | ovarian: | n/a |
50 | chr6:87607161-87607211 | BJ | skin: | n/a |
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:87343553..87345245-chr6:87346173..87348745,2 | K562 | blood: | |
2 | chr1:144532698..144535379-chr6:87481170..87482690,3 | K562 | blood: | |
3 | chr6:87322046..87324306-chr6:87330179..87333097,2 | K562 | blood: | |
4 | chr6:87314634..87318988-chr6:87322106..87325054,3 | K562 | blood: | |
5 | chr6:87433852..87435934-chr6:87437670..87440817,3 | MCF-7 | breast: | |
6 | chr13:44659379..44659987-chr6:87449509..87450364,2 | MCF-7 | breast: | |
7 | chr1:144533824..144534363-chr6:87480670..87481670,2 | HCT-116 | colon: | |
8 | chr6:87432080..87434373-chr6:87487910..87490262,2 | MCF-7 | breast: | |
9 | chr6:87121819..87123929-chr6:87125096..87127462,2 | MCF-7 | breast: | |
10 | chr6:87137565..87139106-chr6:87140631..87142698,2 | K562 | blood: | |
11 | chr6:87424582..87427120-chr6:87432105..87434756,2 | MCF-7 | breast: | |
12 | chr6:87343553..87345245-chr6:87346173..87348745,2 | K562 | blood: | |
13 | chr6:87566606..87567119-chr6:87739226..87739851,2 | MCF-7 | breast: | |
14 | chr6:87569382..87569938-chr6:87739160..87740006,3 | MCF-7 | breast: | |
15 | chr6:87433963..87436868-chr6:87437226..87439496,2 | K562 | blood: | |
16 | chr6:86741107..86743196-chr6:86766246..86768757,2 | MCF-7 | breast: | |
17 | chr6:87059757..87062290-chr6:87067357..87069140,2 | K562 | blood: | |
18 | chr6:86386556..86388965-chr6:87417224..87418892,2 | MCF-7 | breast: | |
19 | chr6:87494199..87497258-chr6:87499220..87502214,3 | K562 | blood: | |
20 | chr6:87314634..87318988-chr6:87322106..87325054,3 | K562 | blood: | |
21 | chr6:87570712..87571662-chr6:87646445..87647351,6 | MCF-7 | breast: | |
22 | chr6:87569230..87570355-chr6:87738909..87740054,4 | MCF-7 | breast: | |
23 | chr6:87494778..87497258-chr6:87499826..87502214,2 | K562 | blood: | |
24 | chr6:87433963..87436868-chr6:87437226..87439496,2 | K562 | blood: | |
25 | chr6:87569023..87569900-chr6:87646597..87647139,2 | MCF-7 | breast: | |
26 | chr6:87624618..87626142-chr6:87628674..87631673,2 | K562 | blood: | |
27 | chr6:86897792..86900051-chr6:86901438..86903650,2 | K562 | blood: | |
28 | chr6:87491790..87492456-chr6:87566446..87567164,4 | MCF-7 | breast: | |
29 | chr6:87225517..87227389-chr6:87237269..87238777,2 | K562 | blood: | |
30 | chr6:86352318..86354176-chr6:87391935..87394056,2 | K562 | blood: | |
31 | chr6:87624618..87626142-chr6:87628674..87631673,2 | K562 | blood: | |
32 | chr6:87424582..87427120-chr6:87432105..87434756,2 | MCF-7 | breast: | |
33 | chr6:87569162..87570137-chr6:87646249..87647415,7 | MCF-7 | breast: | |
34 | chr6:87313812..87315954-chr6:87317958..87322098,3 | K562 | blood: | |
35 | chr6:87300183..87302534-chr6:87323211..87326101,2 | K562 | blood: | |
36 | chr6:87494778..87497258-chr6:87499826..87502214,2 | K562 | blood: | |
37 | chr6:87533978..87535623-chr6:87543693..87545877,2 | K562 | blood: | |
38 | chr6:87491790..87492456-chr6:87566446..87567164,4 | MCF-7 | breast: | |
39 | chr2:199112345..199112956-chr6:87088425..87089218,2 | MCF-7 | breast: | |
40 | chr6:87317696..87319542-chr6:87392510..87394797,2 | K562 | blood: | |
41 | chr6:87225517..87227389-chr6:87237269..87238777,2 | K562 | blood: | |
42 | chr6:87321780..87323458-chr6:87325338..87327123,2 | K562 | blood: | |
43 | chr6:87570969..87571590-chr6:87646510..87647169,2 | MCF-7 | breast: | |
44 | chr6:87322046..87324306-chr6:87330179..87333097,2 | K562 | blood: | |
45 | chr6:86463941..86466706-chr6:87565460..87567312,2 | MCF-7 | breast: | |
46 | chr6:87433212..87433993-chr6:87487281..87488109,4 | MCF-7 | breast: | |
47 | chr6:87432080..87434373-chr6:87487910..87490262,2 | MCF-7 | breast: | |
48 | chr6:86632071..86633265-chr6:86884594..86886454,5 | MCF-7 | breast: | |
49 | chr6:87059757..87062290-chr6:87067357..87069140,2 | K562 | blood: | |
50 | chr6:86722649..86724742-chr6:86768609..86770800,2 | MCF-7 | breast: |
(count:9 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-CGA-5 | chr6:87638499-87638629 | NONHSAT113887 |
2 | lnc-CGA-6 | chr6:87478240-87478650 | NONHSAT113884 |
3 | lnc-CGA-5 | chr6:87548088-87548191 | NONHSAT113886 |
4 | lnc-HTR1E-4 | chr6:87141962-87142387 | NONHSAT113880 |
5 | lnc-CGA-5 | chr6:87547915-87548191 | NONHSAT113887 |
6 | lnc-FAM165A-3 | chr6:86880165-86880736 | NONHSAT113876 |
7 | lnc-HTR1E-3 | chr6:87145570-87145854 | NONHSAT113881 |
8 | lnc-CGA-5 | chr6:87540309-87542399 | NONHSAT113886 |
9 | lnc-CGA-7 | chr6:87439426-87439826 | NONHSAT113883 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000217272 | TF binding region |
RPL7P27 | TF binding region |
ENSG00000217769 | TF binding region |
ENSG00000218561 | TF binding region |
ENSG00000219500 | TF binding region |
ENSG00000219190 | TF binding region |
ENSG00000221101 | TF binding region |
ENSG00000220240 | TF binding region |
NDUFA5P9 | TF binding region |
RN7SL643P | TF binding region |
ENSG00000217272 | CpG island |
RPL7P27 | CpG island |
ENSG00000217769 | CpG island |
ENSG00000218561 | CpG island |
ENSG00000219500 | CpG island |
ENSG00000219190 | CpG island |
ENSG00000221101 | CpG island |
ENSG00000220240 | CpG island |
NDUFA5P9 | CpG island |
RN7SL643P | CpG island |
ENSG00000218561 | chromatin interactions |
ENSG00000243124 | chromatin interactions |
ENSG00000168830 | chromatin interactions |
ENSG00000219500 | chromatin interactions |
ENSG00000201699 | chromatin interactions |
ENSG00000135316 | chromatin interactions |
ENSG00000203875 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs546609517 | chr6:86752014-86752015 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs150281627 | chr6:86752095-86752096 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs530642471 | chr6:86752096-86752097 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs182278236 | chr6:86752107-86752108 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs549537988 | chr6:86752112-86752113 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs570425654 | chr6:86752145-86752146 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs534909638 | chr6:86752203-86752204 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs552741539 | chr6:86752234-86752235 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs138942127 | chr6:86752298-86752299 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs201873013 | chr6:86752311-86752312 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs11410790 | chr6:86752312-86752313 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs201256724 | chr6:86752326-86752327 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs200201370 | chr6:86752328-86752329 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs149404086 | chr6:86752349-86752350 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs557107935 | chr6:86752372-86752373 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs143740479 | chr6:86752376-86752377 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs187196373 | chr6:86752377-86752378 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs190880837 | chr6:86752388-86752389 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs558341567 | chr6:86752393-86752394 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs182341152 | chr6:86752394-86752395 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs565475865 | chr6:86752418-86752419 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs540915065 | chr6:86752461-86752462 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs373804938 | chr6:86752487-86752488 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs561966378 | chr6:86752488-86752489 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs377483293 | chr6:86752550-86752551 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs117193750 | chr6:86752562-86752563 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs544174811 | chr6:86752563-86752564 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs562647650 | chr6:86752583-86752584 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs533215603 | chr6:86752610-86752611 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs1415755 | chr6:86752626-86752627 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
31 | rs185468973 | chr6:86752628-86752629 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs551946381 | chr6:86752631-86752632 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs9362262 | chr6:86752639-86752640 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs533018356 | chr6:86752643-86752644 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs564304006 | chr6:86752685-86752686 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs528404415 | chr6:86752738-86752739 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs143897779 | chr6:86752774-86752775 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs568230276 | chr6:86752793-86752794 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs535455246 | chr6:86752832-86752833 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs550547581 | chr6:86752836-86752837 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs190227190 | chr6:86752838-86752839 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs75647392 | chr6:86752855-86752856 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs558435083 | chr6:86752860-86752861 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs573360883 | chr6:86752871-86752872 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs537615975 | chr6:86752879-86752880 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs147267247 | chr6:86752880-86752881 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs556050500 | chr6:86752886-86752887 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs182571969 | chr6:86752911-86752912 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs574208159 | chr6:86752930-86752931 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs544210799 | chr6:86752952-86752953 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Uveal melanoma | 21693616 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Biliary cancer | 19435499 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Malaria | 21533027 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Autism | 21448237 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Autism | 22495311 | CNVD |
Gastric cancer | 17908304 | CNVD |
Biliary cancer | 20360734 | CNVD |
Breast cancer | 20360734 | CNVD |
Coronary artery disease | 20360734 | CNVD |
Crohn''s disease | 20360734 | CNVD |
Hypertension | 20360734 | CNVD |
Rheumatoid arthritis | 20360734 | CNVD |
Type 1 diabetes | 20360734 | CNVD |
Type 2 diabetes | 20360734 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Breast cancer | 17603634 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Systemic lupus erythematosus | 17503323 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Follicular lymphoma | 19010834 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Phyllodes tumor | 17334353 | CNVD |
Breast cancer | 16608533 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Prostate cancer | 16705090 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Ependymoma | 16718352 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Intracranial tumor | 16823260 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Prostate cancer | 16573809 | CNVD |
Breast cancer | 16272173 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Prostate cancer | 18632612 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Diffuse large b-cell lymphoma | 18287131 | CNVD |
Urothelial carcinoma | 18382360 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Wilms tumour | 21544195 | CNVD |
Follicular lymphoma | 17699855 | CNVD |
Breast cancer | 17133270 | CNVD |
Leukemia | 18688285 | CNVD |
Prostate cancer | 19242612 | CNVD |
Glioma | 21046410 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Zellweger syndrome | 21572526 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Congenital diaphragmatic hernia | 21085971 | CNVD |
Malignant melanoma | 18718029 | CNVD |
Lung adenocarcinoma | 21935476 | CNVD |
Prostate cancer | 16461572 | CNVD |
Mental retardation | 21045960 | CNVD |
Obesity | 21045960 | CNVD |
learning difficulties | 21045960 | CNVD |
Prostate cancer | 17245344 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Cancer | 20164920 | CNVD |
Burkitt''s lymphoma | 20823134 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 21858162 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
Acute lymphoblastic leukemia | 17640729 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Chondromyxoid Fibroma | 20696777 | CNVD |
Cancer | 21183584 | CNVD |
craniofacial dysmorphism | 21918468 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
abnormal development | 18461090 | CNVD |
Myelodysplastic syndrome | 18508791 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Breast cancer | 21364760 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Glioma | 20126413 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Schizophrenia | 23813976 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Developmental delay | 19490664 | CNVD |
Cancer | 20164919 | CNVD |
Urothelial cell carcinoma | 18451213 | CNVD |
T-cell acute lymphoblastic leukemia | 19406988 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:86752000-86752400 | Enhancers | Liver | Liver |
2 | chr6:86752400-86754600 | Weak transcription | Liver | Liver |
3 | chr6:86754600-86755400 | Enhancers | Liver | Liver |
4 | chr6:86766800-86767200 | Enhancers | H1 Cell Line | embryonic stem cell |
5 | chr6:86766800-86767400 | Active TSS | HUES48 Cell Line | embryonic stem cell |
6 | chr6:86766800-86767600 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
7 | chr6:86766800-86767800 | Active TSS | HUES6 Cell Line | embryonic stem cell |
8 | chr6:86766800-86767800 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
9 | chr6:86766800-86768000 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
10 | chr6:86767200-86767400 | Active TSS | H9 Cell Line | embryonic stem cell |
11 | chr6:86767200-86767400 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
12 | chr6:86767200-86767400 | Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
13 | chr6:86767200-86767600 | Flanking Active TSS | H1 Cell Line | embryonic stem cell |
14 | chr6:86767400-86767600 | Flanking Active TSS | H9 Cell Line | embryonic stem cell |
15 | chr6:86767400-86767600 | Flanking Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
16 | chr6:86767400-86767600 | Enhancers | Ovary | ovary |
17 | chr6:86767400-86767800 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
18 | chr6:86767400-86767800 | Flanking Active TSS | iPS-18 Cell Line | embryonic stem cell |
19 | chr6:86767400-86767800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
20 | chr6:86767400-86768000 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
21 | chr6:86767600-86767800 | Enhancers | H9 Cell Line | embryonic stem cell |
22 | chr6:86767600-86767800 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
23 | chr6:86767600-86768000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
24 | chr6:86767600-86768000 | Flanking Active TSS | iPS-15b Cell Line | embryonic stem cell |
25 | chr6:86767600-86769600 | Weak transcription | Ovary | ovary |
26 | chr6:86767800-86768000 | Flanking Active TSS | HUES6 Cell Line | embryonic stem cell |
27 | chr6:86767800-86768000 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
28 | chr6:86769600-86770000 | Enhancers | Ovary | ovary |
29 | chr6:86779000-86779600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
30 | chr6:86779000-86779600 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
31 | chr6:86779000-86779600 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
32 | chr6:86779200-86779600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
33 | chr6:86788800-86790200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
34 | chr6:86789800-86790400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
35 | chr6:86804200-86804800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
36 | chr6:86804200-86804800 | ZNF genes & repeats | Aorta | Aorta |
37 | chr6:86826400-86826600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
38 | chr6:86826600-86839600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
39 | chr6:86839600-86839800 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
40 | chr6:86852200-86852800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
41 | chr6:86852800-86856800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
42 | chr6:86854600-86854800 | Enhancers | Ovary | ovary |
43 | chr6:86854800-86865800 | Weak transcription | Ovary | ovary |
44 | chr6:86856800-86857000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
45 | chr6:86856800-86857000 | Enhancers | Pancreas | Pancrea |
46 | chr6:86857000-86858200 | Weak transcription | Pancreas | Pancrea |
47 | chr6:86857200-86857400 | Bivalent Enhancer | iPS-15b Cell Line | embryonic stem cell |
48 | chr6:86858200-86858800 | Enhancers | Pancreas | Pancrea |
49 | chr6:86858800-86862200 | Weak transcription | Pancreas | Pancrea |
50 | chr6:86860800-86862600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |