Variant report

Variant	nsv1026508
Chromosome Location	chr8:68038761-68135111
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:413)
CpG islands
(count:244)
Chromatin interactive
region (count:57)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:4)

(count:413 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:68065780-68065880	K562	blood:	n/a	n/a
2	ATF2	chr8:68108339-68108875	GM12878	blood:	n/a	n/a
3	ATF2	chr8:68108470-68108909	GM12878	blood:	n/a	n/a
4	BATF	chr8:68108487-68108823	GM12878	blood:	n/a	n/a
5	BATF	chr8:68071443-68071797	GM12878	blood:	n/a	n/a
6	BRCA1	chr8:68107483-68107530	H1-hESC	embryonic stem cell:	n/a	n/a
7	CEBPB	chr8:68108163-68108462	Hela-S3	cervix:	n/a	chr8:68108263-68108274
8	CEBPB	chr8:68076544-68076875	A549	lung:	n/a	chr8:68076724-68076735
9	CEBPB	chr8:68044457-68044696	K562	blood:	n/a	chr8:68044543-68044554
10	CEBPB	chr8:68129459-68129766	HepG2	liver:	n/a	n/a
11	CEBPB	chr8:68093918-68094118	HepG2	liver:	n/a	chr8:68093982-68093993
12	CEBPB	chr8:68044396-68044716	IMR90	lung:	n/a	chr8:68044543-68044554
13	CEBPB	chr8:68057090-68057352	HepG2	liver:	n/a	chr8:68057257-68057268
14	CEBPB	chr8:68108138-68108770	IMR90	lung:	n/a	chr8:68108263-68108274
15	CEBPB	chr8:68044426-68044629	HepG2	liver:	n/a	chr8:68044543-68044554
16	CEBPB	chr8:68108127-68108479	A549	lung:	n/a	chr8:68108263-68108274
17	CEBPB	chr8:68125765-68125766	H1-hESC	embryonic stem cell:	n/a	n/a
18	CEBPB	chr8:68105777-68106006	HepG2	liver:	n/a	n/a
19	CEBPB	chr8:68108158-68108438	HepG2	liver:	n/a	chr8:68108263-68108274
20	CEBPB	chr8:68044387-68044724	HepG2	liver:	n/a	chr8:68044543-68044554
21	CEBPB	chr8:68057084-68057433	K562	blood:	n/a	chr8:68057257-68057268
22	CEBPB	chr8:68124637-68124953	HepG2	liver:	n/a	chr8:68124764-68124775
23	CEBPB	chr8:68044368-68044721	A549	lung:	n/a	chr8:68044543-68044554
24	CEBPB	chr8:68049232-68049274	K562	blood:	n/a	n/a
25	CEBPB	chr8:68057085-68057376	H1-hESC	embryonic stem cell:	n/a	chr8:68057257-68057268
26	CEBPB	chr8:68076544-68076895	HepG2	liver:	n/a	chr8:68076724-68076735
27	CEBPB	chr8:68057094-68057354	Hela-S3	cervix:	n/a	chr8:68057257-68057268
28	CEBPB	chr8:68108257-68108280	H1-hESC	embryonic stem cell:	n/a	chr8:68108263-68108274
29	CEBPB	chr8:68065864-68065964	K562	blood:	n/a	chr8:68065878-68065891
30	CEBPB	chr8:68124660-68124993	H1-hESC	embryonic stem cell:	n/a	chr8:68124764-68124775
31	CEBPB	chr8:68044398-68044717	MCF-7	breast:	n/a	chr8:68044543-68044554
32	CEBPB	chr8:68053800-68053928	H1-hESC	embryonic stem cell:	n/a	n/a
33	CEBPB	chr8:68057162-68057407	MCF-7	breast:	n/a	chr8:68057257-68057268
34	CEBPB	chr8:68040311-68040611	IMR90	lung:	n/a	n/a
35	CEBPB	chr8:68044385-68044681	Hela-S3	cervix:	n/a	chr8:68044543-68044554
36	CEBPB	chr8:68053792-68053906	K562	blood:	n/a	n/a
37	CEBPB	chr8:68057093-68057349	IMR90	lung:	n/a	chr8:68057257-68057268
38	CEBPB	chr8:68129493-68129725	A549	lung:	n/a	n/a
39	CEBPB	chr8:68053740-68053941	IMR90	lung:	n/a	n/a
40	CEBPB	chr8:68044365-68044733	HepG2	liver:	n/a	chr8:68044543-68044554
41	CEBPB	chr8:68057096-68057354	A549	lung:	n/a	chr8:68057257-68057268
42	CEBPB	chr8:68093857-68094132	A549	lung:	n/a	chr8:68093982-68093993
43	CEBPD	chr8:68099029-68099576	K562	blood:	n/a	n/a
44	CTCF	chr8:68122637-68122728	Fibrobl	skin:	n/a	n/a
45	CTCF	chr8:68118160-68118310	K562	blood:	n/a	n/a
46	CTCF	chr8:68061440-68061590	HepG2	liver:	n/a	n/a
47	CTCF	chr8:68129310-68129411	GM20000	blood:	n/a	n/a
48	CTCF	chr8:68043135-68043161	ProgFib	skin:	n/a	n/a
49	CTCF	chr8:68094341-68094441	Kidney_OC	kidney:	n/a	n/a
50	CTCF	chr8:68121680-68121830	HAc	cerebellar:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:68125092-68125142	HCT-116	colon:	n/a
2	chr8:68110902-68110952	HRE	kidney:	n/a
3	chr8:68125092-68125142	NHBE	bronchial:	n/a
4	chr8:68080400-68080450	SK-N-MC	brain:	n/a
5	chr8:68107083-68107133	HRCEpiC	kidney:	n/a
6	chr8:68110902-68110952	H1-hESC	embryonic stem cell:	embryo
7	chr8:68107083-68107133	HIPEpiC	eye:	n/a
8	chr8:68107083-68107133	ECC-1	luminal epithelium:	n/a
9	chr8:68080400-68080450	CMK	blood:	n/a
10	chr8:68080400-68080450	NB4	blood:	n/a
11	chr8:68080400-68080450	HCPEpiC	choroid plexus:	n/a
12	chr8:68110902-68110952	GM12878	blood:	n/a
13	chr8:68080400-68080450	AG04450	lung:	fetal
14	chr8:68110902-68110952	GM19239	blood:	n/a
15	chr8:68125092-68125142	NT2-D1	testis:	n/a
16	chr8:68110902-68110952	SK-N-SH_RA	brain:	n/a
17	chr8:68080400-68080450	K562	blood:	n/a
18	chr8:68080400-68080450	PFSK-1	brain:	n/a
19	chr8:68125092-68125142	HAEpiC	amniotic membrane:	n/a
20	chr8:68125092-68125142	SK-N-SH	brain:	n/a
21	chr8:68107083-68107133	SK-N-MC	brain:	n/a
22	chr8:68107083-68107133	GM06990	blood:	n/a
23	chr8:68125092-68125142	HRE	kidney:	n/a
24	chr8:68110902-68110952	LNCaP	prostate:	n/a
25	chr8:68107083-68107133	A549	lung:	n/a
26	chr8:68107083-68107133	HPAEpiC	pulmonary alveolar:	n/a
27	chr8:68125092-68125142	Hela-S3	cervix:	n/a
28	chr8:68080400-68080450	LNCaP	prostate:	n/a
29	chr8:68080400-68080450	HRE	kidney:	n/a
30	chr8:68107083-68107133	ovcar-3	ovarian:	n/a
31	chr8:68110902-68110952	HNPCEpiC	eye:	n/a
32	chr8:68107083-68107133	PrEC	prostate:	n/a
33	chr8:68080400-68080450	HAEpiC	amniotic membrane:	n/a
34	chr8:68107083-68107133	PANC-1	pancreas:	n/a
35	chr8:68125092-68125142	AoSMC	blood vessel:	n/a
36	chr8:68080400-68080450	AG09319	gingival:	n/a
37	chr8:68080400-68080450	T-47D	breast:	n/a
38	chr8:68125092-68125142	H1-hESC	embryonic stem cell:	embryo
39	chr8:68080400-68080450	SKMC	muscle:	n/a
40	chr8:68107083-68107133	MCF10A-Er-Src	breast:	n/a
41	chr8:68110902-68110952	SAEC	small airway:	n/a
42	chr8:68080400-68080450	IMR90	lung:	fetal
43	chr8:68110902-68110952	AG04449	skin:	fetal
44	chr8:68080400-68080450	HPAEpiC	pulmonary alveolar:	n/a
45	chr8:68080400-68080450	Hela-S3	cervix:	n/a
46	chr8:68110902-68110952	PrEC	prostate:	n/a
47	chr8:68110902-68110952	SK-N-MC	brain:	n/a
48	chr8:68125092-68125142	HepG2	liver:	n/a
49	chr8:68080400-68080450	SAEC	small airway:	n/a
50	chr8:68110902-68110952	BE2_C	brain:	n/a

(count:57 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr8:67835610..67837690-chr8:68125017..68126904,2	K562	blood:
2	chr8:67976683..67978941-chr8:68094307..68096664,2	K562	blood:
3	chr8:68112732..68114911-chr8:68116863..68119997,3	K562	blood:
4	chr8:68039129..68041953-chr8:68044102..68045625,2	K562	blood:
5	chr8:68068385..68070863-chr8:68074537..68076964,2	K562	blood:
6	chr8:68040930..68042442-chr8:68048471..68050684,2	K562	blood:
7	chr8:68103791..68106483-chr8:68107302..68110332,3	K562	blood:
8	chr8:68111984..68114620-chr8:68117011..68118931,2	K562	blood:
9	chr8:68103791..68106410-chr8:68107302..68110578,4	K562	blood:
10	chr8:68054368..68056716-chr8:68058153..68060696,2	K562	blood:
11	chr8:68074799..68076714-chr8:68078840..68080441,2	K562	blood:
12	chr8:68085116..68087997-chr8:68090501..68093415,2	MCF-7	breast:
13	chr8:68106793..68109723-chr8:68110037..68111833,2	K562	blood:
14	chr8:67833716..67836650-chr8:68108377..68110562,2	K562	blood:
15	chr8:68040930..68042442-chr8:68048471..68050684,2	K562	blood:
16	chr8:67835666..67838767-chr8:68102969..68106135,3	K562	blood:
17	chr8:67971594..67973615-chr8:68104400..68106393,2	MCF-7	breast:
18	chr8:68103791..68106483-chr8:68107302..68110332,3	K562	blood:
19	chr8:68054368..68056716-chr8:68058153..68060696,2	K562	blood:
20	chr8:68066129..68069885-chr8:68074156..68076683,4	K562	blood:
21	chr8:68038512..68041443-chr8:68043392..68045199,2	MCF-7	breast:
22	chr8:68039129..68041953-chr8:68044102..68045625,2	K562	blood:
23	chr8:68112732..68114911-chr8:68116863..68119997,3	K562	blood:
24	chr8:68106793..68109723-chr8:68110037..68111833,2	K562	blood:
25	chr8:68086366..68088943-chr8:68089390..68092288,2	K562	blood:
26	chr8:68030814..68032510-chr8:68038981..68041972,2	K562	blood:
27	chr8:68103451..68106399-chr8:68110061..68112606,2	MCF-7	breast:
28	chr8:68059036..68061219-chr8:68063581..68066022,2	K562	blood:
29	chr8:68049843..68052686-chr8:68057977..68059611,2	K562	blood:
30	chr8:68068690..68070292-chr8:68071142..68074042,2	K562	blood:
31	chr8:68049843..68052686-chr8:68057977..68059611,2	K562	blood:
32	chr8:68098861..68101473-chr8:68104225..68105893,2	MCF-7	breast:
33	chr8:68103791..68106410-chr8:68107302..68110578,4	K562	blood:
34	chr2:88315577..88316138-chr8:68058073..68058573,2	MCF-7	breast:
35	chr8:68034598..68037205-chr8:68038455..68041133,2	MCF-7	breast:
36	chr8:68085116..68087997-chr8:68090501..68093415,2	MCF-7	breast:
37	chr8:68133026..68135456-chr8:121726953..121729771,2	MCF-7	breast:
38	chr8:68093632..68095325-chr8:68098007..68100821,2	K562	blood:
39	chr8:68074799..68076714-chr8:68078840..68080441,2	K562	blood:
40	chr8:68021467..68023804-chr8:68064580..68067516,2	K562	blood:
41	chr8:68086057..68088943-chr8:68089390..68093675,3	K562	blood:
42	chr8:68103451..68106399-chr8:68110061..68112606,2	MCF-7	breast:
43	chr8:68098861..68101473-chr8:68104225..68105893,2	MCF-7	breast:
44	chr8:68062959..68065035-chr8:68067846..68069927,2	MCF-7	breast:
45	chr8:68093632..68095325-chr8:68098007..68100821,2	K562	blood:
46	chr8:68040015..68041733-chr8:68043068..68045142,2	MCF-7	breast:
47	chr8:67831601..67833863-chr8:68059505..68062271,2	MCF-7	breast:
48	chr8:68040015..68041733-chr8:68043068..68045142,2	MCF-7	breast:
49	chr8:68086366..68088943-chr8:68089390..68092288,2	K562	blood:
50	chr8:68059036..68061219-chr8:68063581..68066022,2	K562	blood:

No data

(count:4 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	ARFGEF1	hsa-miR-215-5p	chr8:68109935-68109928
2	ARFGEF1	hsa-miR-192-5p	chr8:68109929-68109949
3	ARFGEF1	hsa-miR-215-5p	chr8:68109929-68109949
4	ARFGEF1	hsa-miR-192-5p	chr8:68109935-68109928

Variant related genes	Relation type
ENSG00000250869	TF binding region
CSPP1	TF binding region
ARFGEF1	TF binding region
ENSG00000250869	CpG island
CSPP1	CpG island
ARFGEF1	CpG island
ENSG00000104218	chromatin interactions
ENSG00000222724	chromatin interactions
ENSG00000121022	chromatin interactions
ENSG00000066777	chromatin interactions
ENSG00000245910	chromatin interactions
ENSG00000254341	chromatin interactions

Extended variants
information (count: 3315 )
Associated
traits (count: 111 )

Variant overlapped rSNPs/rCNVs (count:3315 , 50 per page) page: 1 2 3 4 5 6 7 ... 67

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs540425060	chr8:68038763-68038764	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs369352352	chr8:68038779-68038780	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs560759197	chr8:68038798-68038799	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs572817386	chr8:68038850-68038851	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs186331395	chr8:68038904-68038905	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs561796802	chr8:68038905-68038906	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs530518142	chr8:68038912-68038913	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs145991532	chr8:68039010-68039011	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs139874640	chr8:68039036-68039037	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs533256227	chr8:68039138-68039139	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs546446630	chr8:68039165-68039166	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs373030341	chr8:68039216-68039217	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs143254180	chr8:68039220-68039221	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs529086130	chr8:68039275-68039276	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs190973692	chr8:68039320-68039321	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs569055575	chr8:68039358-68039359	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs145475948	chr8:68039479-68039480	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs182821604	chr8:68039484-68039485	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs187362598	chr8:68039491-68039492	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs370005430	chr8:68039540-68039541	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs35775645	chr8:68039569-68039570	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs571820334	chr8:68039594-68039595	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs148402717	chr8:68039619-68039620	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs371694545	chr8:68039647-68039648	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs190955286	chr8:68039651-68039652	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs114933732	chr8:68039654-68039655	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs375956257	chr8:68039655-68039656	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs555494305	chr8:68039693-68039694	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs577830742	chr8:68039770-68039771	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs183282819	chr8:68039772-68039773	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs544184146	chr8:68039839-68039840	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs73693124	chr8:68039869-68039870	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs142998078	chr8:68039897-68039898	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs187574879	chr8:68039946-68039947	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs560215187	chr8:68039947-68039948	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs529050277	chr8:68040008-68040009	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs548804756	chr8:68040093-68040094	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs568969816	chr8:68040118-68040119	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs560076973	chr8:68040160-68040161	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs527672749	chr8:68040319-68040320	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs531714205	chr8:68040344-68040345	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs549014000	chr8:68040350-68040351	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs377552264	chr8:68040466-68040467	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs571601500	chr8:68040496-68040497	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs533968427	chr8:68040524-68040525	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs112949471	chr8:68040528-68040529	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs7820327	chr8:68040632-68040633	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs568002156	chr8:68040635-68040636	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs374423255	chr8:68040661-68040662	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs556801841	chr8:68040666-68040667	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:111)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Cancer	20164920	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Salivary gland tumor	18059337	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
Melanoma	22183965	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
small cell lung cancer	20016488	CNVD
Sezary syndrome	18413736	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	17142309	CNVD
Glioblastoma multiforme	19115005	CNVD
head and neck squamous cell carcinoma	16715129	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	20844748	CNVD
Breast cancer	21399628	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Gastric cancer	22014070	CNVD
Pancreatic cancer	17952125	CNVD
Osteosarcoma	21215367	CNVD
Renal cell carcinoma	21215367	CNVD

Chromatin state (count:2354 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67977800-68044000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr8:67978200-68074400	Weak transcription	Esophagus	oesophagus
3	chr8:67978400-68044800	Weak transcription	Brain Angular Gyrus	brain
4	chr8:67978400-68045600	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr8:67978600-68074200	Weak transcription	Psoas Muscle	Psoas
6	chr8:67978800-68044200	Weak transcription	Colon Smooth Muscle	Colon
7	chr8:67986400-68045400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr8:67988200-68038800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
9	chr8:67988200-68074800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr8:67990400-68074400	Weak transcription	Spleen	Spleen
11	chr8:67993200-68044200	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr8:67993400-68044000	Weak transcription	Ovary	ovary
13	chr8:67993400-68085000	Weak transcription	Aorta	Aorta
14	chr8:67994200-68044200	Weak transcription	Stomach Smooth Muscle	stomach
15	chr8:68005400-68038800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr8:68005800-68044400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr8:68006400-68039200	Weak transcription	GM12878-XiMat	blood
18	chr8:68008000-68040000	Weak transcription	NHLF	lung
19	chr8:68008000-68045600	Weak transcription	Rectal Smooth Muscle	rectum
20	chr8:68008000-68062400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
21	chr8:68008200-68045400	Weak transcription	Fetal Brain Male	brain
22	chr8:68008400-68039200	Weak transcription	A549	lung
23	chr8:68008400-68039600	Weak transcription	NH-A	brain
24	chr8:68008400-68044000	Weak transcription	Brain Substantia Nigra	brain
25	chr8:68008600-68044200	Weak transcription	Brain Hippocampus Middle	brain
26	chr8:68008600-68044400	Weak transcription	Brain Germinal Matrix	brain
27	chr8:68008800-68045800	Weak transcription	Right Ventricle	heart
28	chr8:68017600-68044200	Weak transcription	H9 Cell Line	embryonic stem cell
29	chr8:68021000-68066800	Weak transcription	Lung	lung
30	chr8:68021000-68074400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr8:68021200-68044200	Weak transcription	H1 Cell Line	embryonic stem cell
32	chr8:68021600-68046000	Weak transcription	HSMMtube	muscle
33	chr8:68021800-68048800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr8:68022000-68045800	Weak transcription	Brain Cingulate Gyrus	brain
35	chr8:68022600-68050800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
36	chr8:68022800-68090800	Weak transcription	Small Intestine	intestine
37	chr8:68023000-68044000	Weak transcription	HepG2	liver
38	chr8:68023200-68044000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr8:68024200-68045800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr8:68024200-68092400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
41	chr8:68024600-68044800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr8:68025400-68045800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr8:68025600-68044600	Weak transcription	Primary neutrophils fromperipheralblood	blood
44	chr8:68026000-68074400	Weak transcription	Gastric	stomach
45	chr8:68028000-68043000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr8:68028400-68074400	Weak transcription	Pancreas	Pancrea
47	chr8:68028600-68074400	Weak transcription	NHEK	skin
48	chr8:68029400-68074000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
49	chr8:68029800-68045400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr8:68029800-68045600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links