Variant report

Variant	nsv1026580
Chromosome Location	chr9:199707-449798
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2579)
CpG islands
(count:550)
Chromatin interactive
region (count:160)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2579 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:238911-239096	K562	blood:	n/a	n/a
2	ARID3A	chr9:250210-251866	K562	blood:	n/a	n/a
3	ARID3A	chr9:229136-229466	K562	blood:	n/a	n/a
4	ARID3A	chr9:215966-216247	K562	blood:	n/a	n/a
5	ARID3A	chr9:260270-260544	K562	blood:	n/a	n/a
6	ARID3A	chr9:272095-272522	K562	blood:	n/a	n/a
7	ARID3A	chr9:210220-210873	K562	blood:	n/a	n/a
8	ARID3A	chr9:237608-238477	K562	blood:	n/a	n/a
9	ARID3A	chr9:336046-336405	HepG2	liver:	n/a	n/a
10	ARID3A	chr9:267916-268404	K562	blood:	n/a	n/a
11	ARID3A	chr9:371491-371553	K562	blood:	n/a	n/a
12	ARID3A	chr9:272758-273406	K562	blood:	n/a	chr9:273064-273079
13	ARID3A	chr9:214214-215154	K562	blood:	n/a	n/a
14	ATF1	chr9:428430-428702	K562	blood:	n/a	n/a
15	ATF1	chr9:222266-222777	K562	blood:	n/a	n/a
16	ATF1	chr9:270753-271026	K562	blood:	n/a	n/a
17	ATF1	chr9:211078-211816	K562	blood:	n/a	n/a
18	ATF1	chr9:272781-273161	K562	blood:	n/a	n/a
19	ATF1	chr9:312958-313372	K562	blood:	n/a	n/a
20	ATF1	chr9:272150-272512	K562	blood:	n/a	n/a
21	ATF1	chr9:249153-249485	K562	blood:	n/a	n/a
22	ATF2	chr9:272650-273286	GM12878	blood:	n/a	n/a
23	ATF2	chr9:297286-297859	GM12878	blood:	n/a	n/a
24	ATF2	chr9:272677-273240	GM12878	blood:	n/a	n/a
25	ATF3	chr9:272081-272576	K562	blood:	n/a	n/a
26	ATF3	chr9:326568-327022	H1-hESC	embryonic stem cell:	n/a	n/a
27	ATF3	chr9:210212-210461	K562	blood:	n/a	n/a
28	BACH1	chr9:214677-214706	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:207498-207603	K562	blood:	n/a	n/a
30	BACH1	chr9:214910-215270	H1-hESC	embryonic stem cell:	n/a	n/a
31	BATF	chr9:199669-200113	GM12878	blood:	n/a	n/a
32	BATF	chr9:297420-297885	GM12878	blood:	n/a	chr9:297684-297695 chr9:297685-297695
33	BATF	chr9:199639-200066	GM12878	blood:	n/a	n/a
34	BATF	chr9:278668-278987	GM12878	blood:	n/a	n/a
35	BATF	chr9:200387-200708	GM12878	blood:	n/a	chr9:200519-200530
36	BATF	chr9:297422-297902	GM12878	blood:	n/a	chr9:297684-297695 chr9:297685-297695
37	BCL11A	chr9:199651-199826	GM12878	blood:	n/a	n/a
38	BCL11A	chr9:331212-331567	H1-hESC	embryonic stem cell:	n/a	n/a
39	BCLAF1	chr9:297343-297922	GM12878	blood:	n/a	chr9:297687-297696 chr9:297688-297697
40	BCLAF1	chr9:272658-273387	GM12878	blood:	n/a	chr9:272862-272871
41	BCLAF1	chr9:272677-273191	GM12878	blood:	n/a	chr9:272862-272871
42	BCLAF1	chr9:214465-215559	GM12878	blood:	n/a	n/a
43	BCLAF1	chr9:297419-297950	GM12878	blood:	n/a	chr9:297687-297696 chr9:297688-297697
44	BCLAF1	chr9:307023-307293	GM12878	blood:	n/a	n/a
45	BHLHE40	chr9:272179-272510	K562	blood:	n/a	n/a
46	BHLHE40	chr9:270725-270976	GM12878	blood:	n/a	n/a
47	BHLHE40	chr9:214569-215152	GM12878	blood:	n/a	n/a
48	BHLHE40	chr9:211108-211404	K562	blood:	n/a	n/a
49	BHLHE40	chr9:214709-215301	HepG2	liver:	n/a	n/a
50	BHLHE40	chr9:215354-215372	GM12878	blood:	n/a	n/a

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:273072-273122	U87	brain:	n/a
2	chr9:273072-273122	U87	brain:	n/a
3	chr9:214612-214662	GM06990	blood:	n/a
4	chr9:214612-214662	AG10803	skin:	n/a
5	chr9:211689-211739	HEK293	kidney:	embryo
6	chr9:213650-213700	PrEC	prostate:	n/a
7	chr9:214612-214662	HEK293	kidney:	embryo
8	chr9:215561-215611	HEEpiC	esophagus:	n/a
9	chr9:213650-213700	BJ	skin:	n/a
10	chr9:214690-214740	GM12892	blood:	n/a
11	chr9:215368-215418	MCF-7	breast:	n/a
12	chr9:213650-213700	Hela-S3	cervix:	n/a
13	chr9:214690-214740	Hepatocyte	liver:	n/a
14	chr9:211689-211739	HRE	kidney:	n/a
15	chr9:215561-215611	HCF	heart:	n/a
16	chr9:273072-273122	NT2-D1	testis:	n/a
17	chr9:214268-214318	SKMC	muscle:	n/a
18	chr9:214690-214740	AG04450	lung:	fetal
19	chr9:214612-214662	HRPEpiC	eye:	n/a
20	chr9:273072-273122	HPAEpiC	pulmonary alveolar:	n/a
21	chr9:273072-273122	Hepatocyte	liver:	n/a
22	chr9:211689-211739	Hepatocyte	liver:	n/a
23	chr9:426894-426944	SKMC	muscle:	n/a
24	chr9:211689-211739	HMEC	breast:	n/a
25	chr9:215561-215611	AoSMC	blood vessel:	n/a
26	chr9:273072-273122	Caco-2	colon:	n/a
27	chr9:211689-211739	SKMC	muscle:	n/a
28	chr9:211689-211739	GM19239	blood:	n/a
29	chr9:214612-214662	AG04449	skin:	fetal
30	chr9:273072-273122	AG09319	gingival:	n/a
31	chr9:215368-215418	HRE	kidney:	n/a
32	chr9:426894-426944	MCF-7	breast:	n/a
33	chr9:214612-214662	HMEC	breast:	n/a
34	chr9:215561-215611	HepG2	liver:	n/a
35	chr9:214690-214740	RPTEC	kidney:	n/a
36	chr9:273072-273122	GM19239	blood:	n/a
37	chr9:214268-214318	HCM	heart:	n/a
38	chr9:211689-211739	GM12878	blood:	n/a
39	chr9:215368-215418	GM12878	blood:	n/a
40	chr9:213650-213700	HRE	kidney:	n/a
41	chr9:273072-273122	T-47D	breast:	n/a
42	chr9:214690-214740	Hela-S3	cervix:	n/a
43	chr9:215561-215611	GM06990	blood:	n/a
44	chr9:211689-211739	GM06990	blood:	n/a
45	chr9:215561-215611	GM12891	blood:	n/a
46	chr9:215561-215611	HRPEpiC	eye:	n/a
47	chr9:214612-214662	Hela-S3	cervix:	n/a
48	chr9:215561-215611	GM12878	blood:	n/a
49	chr9:273072-273122	SAEC	small airway:	n/a
50	chr9:215368-215418	AoSMC	blood vessel:	n/a

(count:160 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr9:331276..333871-chr9:335644..338943,3	MCF-7	breast:
2	chr9:258428..261727-chr9:265742..268870,3	K562	blood:
3	chr9:347437..348401-chr9:378296..379161,3	MCF-7	breast:
4	chr9:285389..289218-chr9:290727..294143,4	K562	blood:
5	chr9:240408..242135-chr9:247395..249007,2	MCF-7	breast:
6	chr9:211790..213319-chr9:241598..244495,2	K562	blood:
7	chr9:244363..245872-chr9:248878..250809,2	K562	blood:
8	chr9:246731..252463-chr9:270869..275661,7	K562	blood:
9	chr9:227507..229537-chr9:238867..240547,2	K562	blood:
10	chr9:224171..226015-chr9:253370..255238,2	MCF-7	breast:
11	chr9:258428..261727-chr9:265742..268870,3	K562	blood:
12	chr9:213603..216956-chr9:218226..220394,3	K562	blood:
13	chr9:247322..249745-chr9:277912..279940,2	K562	blood:
14	chr9:418287..419917-chr9:426635..429458,2	MCF-7	breast:
15	chr9:213868..216890-chr9:248711..251891,4	K562	blood:
16	chr5:96288877..96289613-chr9:429812..430395,2	MCF-7	breast:
17	chr1:27191066..27191830-chr9:408050..409042,2	NB4	blood:
18	chr9:213589..216422-chr9:270983..274599,7	K562	blood:
19	chr9:396391..399763-chr9:403196..405645,3	K562	blood:
20	chr9:265556..268525-chr9:268878..270498,2	K562	blood:
21	chr9:212545..218648-chr9:270340..281940,20	K562	blood:
22	chr9:214682..216322-chr9:293864..296795,2	MCF-7	breast:
23	chr9:243324..246093-chr9:246428..250809,6	K562	blood:
24	chr9:396487..398165-chr9:401103..402938,2	K562	blood:
25	chr9:324085..328451-chr9:329787..332698,3	K562	blood:
26	chr9:250806..252981-chr9:269858..272236,2	MCF-7	breast:
27	chr9:347437..348401-chr9:378296..379161,3	MCF-7	breast:
28	chr9:211790..213319-chr9:241598..244495,2	K562	blood:
29	chr9:211912..213756-chr9:227781..229604,2	K562	blood:
30	chr9:285389..289218-chr9:290727..294143,4	K562	blood:
31	chr9:284961..287002-chr9:306876..309185,2	K562	blood:
32	chr9:283346..286966-chr9:287946..290894,7	K562	blood:
33	chr9:212545..218648-chr9:270340..281940,20	K562	blood:
34	chr9:286841..289218-chr9:291668..294143,2	K562	blood:
35	chr9:268983..271562-chr9:284279..286719,2	MCF-7	breast:
36	chr9:385566..386417-chr9:764222..764740,2	MCF-7	breast:
37	chr9:216842..219174-chr9:220888..224256,4	K562	blood:
38	chr9:239328..240900-chr9:247584..249872,2	K562	blood:
39	chr9:288330..291260-chr9:302503..304653,3	K562	blood:
40	chr9:387700..389795-chr9:395557..397565,2	MCF-7	breast:
41	chr9:243324..246093-chr9:246428..250809,6	K562	blood:
42	chr9:350965..353575-chr9:397923..399924,2	K562	blood:
43	chr9:210795..213326-chr9:213922..216378,4	MCF-7	breast:
44	chr9:218197..221460-chr9:224650..228237,4	K562	blood:
45	chr9:207956..209819-chr9:211466..213662,2	MCF-7	breast:
46	chr9:212468..215901-chr9:260350..263868,4	K562	blood:
47	chr9:244363..245872-chr9:248878..250809,2	K562	blood:
48	chr9:224153..226474-chr9:270248..273178,2	K562	blood:
49	chr9:239328..240900-chr9:247584..249872,2	K562	blood:
50	chr9:250806..252981-chr9:269858..272236,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C9orf66-1	chr9:272905-273002	ENSG00000235880.1
2	lnc-C9orf66-1	chr9:267966-268273	ENSG00000235880.1

No data

Variant related genes	Relation type
DOCK8	TF binding region
ENSG00000235880	TF binding region
C9orf66	TF binding region
DOCK8	CpG island
ENSG00000235880	CpG island
C9orf66	CpG island
ENSG00000101191	chromatin interactions
ENSG00000235880	chromatin interactions
ENSG00000183784	chromatin interactions
ENSG00000107099	chromatin interactions
ENSG00000227155	chromatin interactions
ENSG00000226403	chromatin interactions

Extended variants
information (count: 13549 )
Associated
traits (count: 121 )

Variant overlapped rSNPs/rCNVs (count:13549 , 50 per page) page: 1 2 3 4 5 6 7 ... 271

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs200867079	chr9:199713-199714	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs62533289	chr9:199732-199733	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs547551914	chr9:199754-199755	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs112565171	chr9:199785-199786	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs62533290	chr9:199796-199797	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs116771742	chr9:199808-199809	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs530089335	chr9:199823-199824	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs475166	chr9:199834-199835	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs535473551	chr9:199835-199836	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs4025469	chr9:199872-199873	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs569711716	chr9:199896-199897	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs201406837	chr9:199898-199899	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs536973462	chr9:199909-199910	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs367602431	chr9:200033-200034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs570618948	chr9:200052-200053	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs534838018	chr9:200053-200054	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs111694137	chr9:200101-200102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs375082680	chr9:200140-200141	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs368422790	chr9:200165-200166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs553154873	chr9:200199-200200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs555329607	chr9:200245-200246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs574591923	chr9:200269-200270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs535537800	chr9:200274-200275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs572532764	chr9:200362-200363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs575157159	chr9:200370-200371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs543797871	chr9:200435-200436	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs9407935	chr9:200469-200470	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs565588276	chr9:200471-200472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs577440658	chr9:200485-200486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs541229689	chr9:200488-200489	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs199873185	chr9:200509-200510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs559480070	chr9:200548-200549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs530179435	chr9:200566-200567	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs112156897	chr9:200595-200596	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs2785482	chr9:200621-200622	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs368026919	chr9:200652-200653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs113657506	chr9:200692-200693	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs188695441	chr9:200733-200734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs111531100	chr9:200755-200756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs193203205	chr9:200774-200775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs28463943	chr9:200775-200776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs530949717	chr9:200776-200777	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs375414820	chr9:200777-200778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs552259127	chr9:200805-200806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs570726106	chr9:200846-200847	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs185134510	chr9:200860-200861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs4249737	chr9:200866-200867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs568261599	chr9:200882-200883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs554645	chr9:200885-200886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs4237144	chr9:200893-200894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:121)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	20164920	CNVD
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Autism	22495311	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Schizophrenia	20967226	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
early-passage human iPS cells	21368824	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	22522925	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Myelodysplastic syndrome	21251322	CNVD
Primary immunodeficiency	22942019	CNVD
Melanoma	20877625	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Cancer	21215367	CNVD
Renal cell carcinoma	21215367	CNVD
Williams Syndrome	20824207	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	21364760	CNVD
Bipolar disorder	19114987	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:3283 , 50 per page) page: 1 2 3 4 5 6 7 ... 66

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:199600-199800	Enhancers	GM12878-XiMat	blood
2	chr9:199600-200000	Enhancers	Monocytes-CD14+_RO01746	blood
3	chr9:199800-201000	Weak transcription	GM12878-XiMat	blood
4	chr9:201000-201200	Enhancers	GM12878-XiMat	blood
5	chr9:206000-207000	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr9:206000-207200	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr9:206200-206600	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr9:206600-208800	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr9:207000-208400	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr9:207200-207800	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr9:207800-213600	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr9:208000-208800	Enhancers	K562	blood
13	chr9:208400-208600	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr9:208600-209800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
15	chr9:208800-209800	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr9:208800-209800	Flanking Active TSS	K562	blood
17	chr9:208800-213200	Enhancers	Primary neutrophils fromperipheralblood	blood
18	chr9:209200-209800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr9:209200-209800	Enhancers	Spleen	Spleen
20	chr9:209800-210400	Enhancers	Monocytes-CD14+_RO01746	blood
21	chr9:209800-211000	Weak transcription	Spleen	Spleen
22	chr9:209800-213400	Enhancers	K562	blood
23	chr9:209800-213600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr9:209800-214000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr9:210400-210600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
26	chr9:210600-211000	Enhancers	Monocytes-CD14+_RO01746	blood
27	chr9:210600-211400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
28	chr9:210800-212600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr9:211000-211400	Enhancers	Pancreas	Pancrea
30	chr9:211000-211400	Enhancers	Spleen	Spleen
31	chr9:211000-214600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
32	chr9:211200-211400	Enhancers	Placenta	Placenta
33	chr9:211200-212200	Enhancers	Adipose Nuclei	Adipose
34	chr9:211400-211600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
35	chr9:211400-212000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr9:211400-212200	Enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr9:211400-213600	Weak transcription	Pancreas	Pancrea
38	chr9:211400-214000	Enhancers	Primary B cells from cord blood	blood
39	chr9:211400-214000	Weak transcription	Spleen	Spleen
40	chr9:211600-211800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
41	chr9:211800-212600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
42	chr9:212000-214400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr9:212200-214000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
44	chr9:212200-214000	Weak transcription	Adipose Nuclei	Adipose
45	chr9:212400-213000	Enhancers	Primary hematopoietic stem cells	blood
46	chr9:212600-212800	Bivalent/Poised TSS	Fetal Kidney	kidney
47	chr9:212600-212800	Enhancers	Skeletal Muscle Female	skeletal muscle
48	chr9:212600-213000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
49	chr9:212600-213600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr9:213000-214000	Weak transcription	Primary hematopoietic stem cells	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links