Variant report

Variant	nsv1026793
Chromosome Location	chr6:58181781-58422630
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1289)
CpG islands
(count:1160)
Chromatin interactive
region (count:3)
LncRNA
region (count:35)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1289 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr6:58312840-58313086	GM12878	blood:	n/a	n/a
2	ATF2	chr6:58287566-58287962	GM12878	blood:	n/a	n/a
3	ATF2	chr6:58226933-58227385	GM12878	blood:	n/a	n/a
4	ATF2	chr6:58225246-58225574	GM12878	blood:	n/a	n/a
5	ATF2	chr6:58226948-58227297	GM12878	blood:	n/a	n/a
6	ATF2	chr6:58287667-58287899	GM12878	blood:	n/a	n/a
7	BATF	chr6:58274740-58275182	GM12878	blood:	n/a	chr6:58274977-58274988
8	BATF	chr6:58326544-58326859	GM12878	blood:	n/a	n/a
9	BATF	chr6:58241654-58241917	GM12878	blood:	n/a	chr6:58241758-58241769
10	BATF	chr6:58241686-58241892	GM12878	blood:	n/a	chr6:58241758-58241769
11	BATF	chr6:58312874-58313176	GM12878	blood:	n/a	chr6:58313100-58313108
12	BATF	chr6:58226995-58227530	GM12878	blood:	n/a	n/a
13	BATF	chr6:58225176-58225639	GM12878	blood:	n/a	n/a
14	BATF	chr6:58225149-58225723	GM12878	blood:	n/a	n/a
15	BATF	chr6:58287533-58287892	GM12878	blood:	n/a	n/a
16	BATF	chr6:58205099-58205316	GM12878	blood:	n/a	n/a
17	BATF	chr6:58192220-58192422	GM12878	blood:	n/a	n/a
18	BATF	chr6:58312874-58313181	GM12878	blood:	n/a	chr6:58313100-58313108
19	BATF	chr6:58274807-58275130	GM12878	blood:	n/a	chr6:58274977-58274988
20	BATF	chr6:58226989-58227547	GM12878	blood:	n/a	n/a
21	BATF	chr6:58241206-58241440	GM12878	blood:	n/a	chr6:58241313-58241322 chr6:58241337-58241348
22	BCL11A	chr6:58245996-58246178	GM12878	blood:	n/a	n/a
23	BCL11A	chr6:58287570-58287800	GM12878	blood:	n/a	n/a
24	BCL11A	chr6:58227066-58227268	GM12878	blood:	n/a	n/a
25	BCL11A	chr6:58226962-58227383	GM12878	blood:	n/a	n/a
26	BCL11A	chr6:58287319-58287843	GM12878	blood:	n/a	n/a
27	BCL11A	chr6:58205087-58205300	GM12878	blood:	n/a	n/a
28	BCL11A	chr6:58312858-58313167	GM12878	blood:	n/a	chr6:58313103-58313112
29	BCL11A	chr6:58312939-58313153	GM12878	blood:	n/a	chr6:58313103-58313112
30	BCL11A	chr6:58225136-58225637	GM12878	blood:	n/a	n/a
31	BCLAF1	chr6:58287452-58288025	GM12878	blood:	n/a	n/a
32	BCLAF1	chr6:58312816-58313161	GM12878	blood:	n/a	chr6:58313103-58313112
33	BCLAF1	chr6:58287548-58287910	GM12878	blood:	n/a	n/a
34	BHLHE40	chr6:58312965-58313069	GM12878	blood:	n/a	n/a
35	CBX3	chr6:58287493-58287955	K562	blood:	n/a	n/a
36	CBX3	chr6:58287498-58287998	K562	blood:	n/a	n/a
37	CCNT2	chr6:58287622-58287859	K562	blood:	n/a	n/a
38	CEBPB	chr6:58287720-58287958	Hela-S3	cervix:	n/a	n/a
39	CEBPB	chr6:58262027-58262420	K562	blood:	n/a	n/a
40	CEBPB	chr6:58334093-58334264	HepG2	liver:	n/a	chr6:58334239-58334250 chr6:58334239-58334248 chr6:58334237-58334250 chr6:58334239-58334248 chr6:58334239-58334248 chr6:58334237-58334250 chr6:58334239-58334250 chr6:58334239-58334248 chr6:58334237-58334250 chr6:58334237-58334248
41	CEBPB	chr6:58302675-58303028	K562	blood:	n/a	n/a
42	CEBPB	chr6:58287831-58287968	HepG2	liver:	n/a	n/a
43	CEBPB	chr6:58262093-58262326	K562	blood:	n/a	n/a
44	CEBPB	chr6:58287573-58287962	K562	blood:	n/a	n/a
45	CEBPB	chr6:58385936-58386118	IMR90	lung:	n/a	n/a
46	CEBPB	chr6:58357831-58357857	HepG2	liver:	n/a	chr6:58357833-58357844 chr6:58357834-58357845
47	CEBPD	chr6:58287424-58287881	K562	blood:	n/a	n/a
48	CEBPD	chr6:58300940-58301286	K562	blood:	n/a	n/a
49	CEBPD	chr6:58287449-58287865	HepG2	liver:	n/a	n/a
50	CEBPD	chr6:58302568-58303070	K562	blood:	n/a	n/a

(count:1160 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:58287825-58287875	HEEpiC	esophagus:	n/a
2	chr6:58287825-58287875	HEEpiC	esophagus:	n/a
3	chr6:58289118-58289168	HepG2	liver:	n/a
4	chr6:58287825-58287875	GM12891	blood:	n/a
5	chr6:58287827-58287877	RPTEC	kidney:	n/a
6	chr6:58263193-58263243	LNCaP	prostate:	n/a
7	chr6:58399599-58399649	HAEpiC	amniotic membrane:	n/a
8	chr6:58263122-58263172	CMK	blood:	n/a
9	chr6:58263193-58263243	Hepatocyte	liver:	n/a
10	chr6:58399664-58399714	Hela-S3	cervix:	n/a
11	chr6:58287825-58287875	K562	blood:	n/a
12	chr6:58287758-58287808	GM12891	blood:	n/a
13	chr6:58259157-58259207	SKMC	muscle:	n/a
14	chr6:58287758-58287808	IMR90	lung:	fetal
15	chr6:58263122-58263172	Hela-S3	cervix:	n/a
16	chr6:58287827-58287877	ovcar-3	ovarian:	n/a
17	chr6:58182993-58183043	AG09319	gingival:	n/a
18	chr6:58287430-58287480	AoSMC	blood vessel:	n/a
19	chr6:58287694-58287744	HL-60	blood:	n/a
20	chr6:58259157-58259207	H1-hESC	embryonic stem cell:	embryo
21	chr6:58287822-58287872	SKMC	muscle:	n/a
22	chr6:58287758-58287808	AG04450	lung:	fetal
23	chr6:58287694-58287744	BE2_C	brain:	n/a
24	chr6:58287822-58287872	HRCEpiC	kidney:	n/a
25	chr6:58289118-58289168	HIPEpiC	eye:	n/a
26	chr6:58287430-58287480	SAEC	small airway:	n/a
27	chr6:58286735-58286785	HMEC	breast:	n/a
28	chr6:58399664-58399714	AG09309	skin:	n/a
29	chr6:58287825-58287875	HRE	kidney:	n/a
30	chr6:58399599-58399649	AG09319	gingival:	n/a
31	chr6:58399599-58399649	HNPCEpiC	eye:	n/a
32	chr6:58287694-58287744	Jurkat	blood:	n/a
33	chr6:58263122-58263172	AG10803	skin:	n/a
34	chr6:58289131-58289181	HL-60	blood:	n/a
35	chr6:58399599-58399649	RPTEC	kidney:	n/a
36	chr6:58263122-58263172	BJ	skin:	n/a
37	chr6:58263193-58263243	HEK293	kidney:	embryo
38	chr6:58290947-58290997	ovcar-3	ovarian:	n/a
39	chr6:58285006-58285056	AG09319	gingival:	n/a
40	chr6:58287827-58287877	SK-N-MC	brain:	n/a
41	chr6:58287758-58287808	HMEC	breast:	n/a
42	chr6:58399793-58399843	HUVEC	blood vessel:	n/a
43	chr6:58263193-58263243	ECC-1	luminal epithelium:	n/a
44	chr6:58287938-58287988	HPAEpiC	pulmonary alveolar:	n/a
45	chr6:58399793-58399843	PrEC	prostate:	n/a
46	chr6:58285006-58285056	HCPEpiC	choroid plexus:	n/a
47	chr6:58287827-58287877	A549	lung:	n/a
48	chr6:58287827-58287877	HCT-116	colon:	n/a
49	chr6:58287430-58287480	HAEpiC	amniotic membrane:	n/a
50	chr6:58287825-58287875	T-47D	breast:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:37379216..37379885-chr6:58287233..58287739,2	Hela-S3	cervix:
2	chr6:58293670..58295896-chr6:58296442..58300027,3	K562	blood:
3	chr6:58293670..58295896-chr6:58296442..58298545,2	K562	blood:

(count:35 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RAB23-3	chr6:58272400-58273455	NONHSAT113318
2	lnc-RAB23-3	chr6:58275196-58275417	NONHSAT113318
3	lnc-RAB23-4	chr6:58272361-58273455	ENSG00000215190
4	lnc-RAB23-3	chr6:58285306-58285389	NONHSAT113317
5	lnc-BAG2-6	chr6:58291908-58292021	ENSG00000225096
6	lnc-BAG2-4	chr6:58186873-58187271	XLOC_005332
7	lnc-RAB23-19	chr6:58397998-58399412	NONHSAT113321
8	lnc-RAB23-3	chr6:58239194-58239687	XLOC_005753
9	lnc-RAB23-3	chr6:58287599-58287654	NONHSAT113319
10	lnc-RAB23-3	chr6:58285306-58285389	NONHSAT113319
11	lnc-RAB23-3	chr6:58287430-58287502	NONHSAT113317
12	lnc-BAG2-5	chr6:58243460-58243544	ENSG00000236143.1
13	lnc-RAB23-3	chr6:58287599-58287654	NONHSAT113317
14	lnc-RAB23-3	chr6:58275196-58275346	NONHSAT113310
15	lnc-RAB23-3	chr6:58275087-58275346	NONHSAT113319
16	lnc-RAB23-3	chr6:58275196-58275346	NONHSAT113311
17	lnc-BAG2-6	chr6:58298372-58298496	ENSG00000225096
18	lnc-BAG2-12	chr6:58290606-58290988	l_3195_chr6:58290605-58295048_testes
19	lnc-RAB23-3	chr6:58272393-58273455	NONHSAT113317
20	lnc-RAB23-3	chr6:58234692-58238642	XLOC_005753
21	lnc-RAB23-3	chr6:58275636-58276125	NONHSAT113311
22	lnc-RAB23-17	chr6:58186881-58187205	NONHSAT113305
23	lnc-RAB23-3	chr6:58234838-58240189	ENSG00000272316.1
24	lnc-BAG2-4	chr6:58182220-58183029	XLOC_005332
25	lnc-BAG2-5	chr6:58243374-58243434	ENSG00000236143.1
26	lnc-RAB23-17	chr6:58192326-58192620	NONHSAT113305
27	lnc-RAB23-16	chr6:58182169-58182746	ENSG00000272541.1
28	lnc-RAB23-3	chr6:58276137-58276366	NONHSAT113310
29	lnc-RAB23-18	chr6:58228887-58229426	ENSG00000271761.1
30	lnc-BAG2-6	chr6:58297873-58297934	ENSG00000225096
31	lnc-RAB23-3	chr6:58272350-58273455	NONHSAT113310
32	lnc-BAG2-12	chr6:58294832-58295048	l_3195_chr6:58290605-58295048_testes
33	lnc-RAB23-4	chr6:58275151-58276677	ENSG00000215190
34	lnc-RAB23-3	chr6:58287430-58287502	NONHSAT113319
35	lnc-RAB23-3	chr6:58272350-58273455	NONHSAT113311

No data

Variant related genes	Relation type
ENSG00000272316	TF binding region
ENSG00000272541	TF binding region
GUSBP4	TF binding region
LINC00680	TF binding region
POM121L14P	TF binding region
GAPDHP15	TF binding region
ENSG00000271761	TF binding region
ENSG00000216687	TF binding region
ENSG00000225096	TF binding region
ENSG00000272316	CpG island
ENSG00000272541	CpG island
GUSBP4	CpG island
LINC00680	CpG island
POM121L14P	CpG island
GAPDHP15	CpG island
ENSG00000271761	CpG island
ENSG00000216687	CpG island
ENSG00000225096	CpG island
ENSG00000214563	chromatin interactions
ENSG00000082068	chromatin interactions

Extended variants
information (count: 3865 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:3865 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1045423	chr6:58182205-58182206	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs533765309	chr6:58182251-58182252	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs1045422	chr6:58182263-58182264	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs1045420	chr6:58182292-58182293	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs397753030	chr6:58182323-58182324	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs555357649	chr6:58182328-58182329	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs563601406	chr6:58182329-58182330	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs374346848	chr6:58182391-58182392	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs1045413	chr6:58182397-58182398	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs9500340	chr6:58182499-58182500	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs2398027	chr6:58182518-58182519	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs566081920	chr6:58182622-58182623	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs9500344	chr6:58182684-58182685	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs560319045	chr6:58182687-58182688	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs4928454	chr6:58182701-58182702	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs2758392	chr6:58182714-58182715	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs549521945	chr6:58182727-58182728	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs565029383	chr6:58182732-58182733	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs568489132	chr6:58182733-58182734	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs537406950	chr6:58182737-58182738	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
21	rs9377819	chr6:58182761-58182762	Inactive region	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
22	rs371735234	chr6:58182781-58182782	Inactive region	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
23	rs571296303	chr6:58182787-58182788	Inactive region	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
24	rs193021213	chr6:58182805-58182806	Inactive region	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
25	rs2743060	chr6:58182888-58182889	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs570677565	chr6:58182945-58182946	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
27	rs527611454	chr6:58182957-58182958	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs138677212	chr6:58182959-58182960	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
29	rs539301443	chr6:58182962-58182963	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs565869278	chr6:58182976-58182977	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs536363237	chr6:58182977-58182978	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
32	rs555509739	chr6:58182993-58182994	Inactive region	CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs1826200	chr6:58182998-58182999	Inactive region	CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs553120913	chr6:58183008-58183009	Inactive region	CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs2743062	chr6:58183022-58183023	Inactive region	CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs570087382	chr6:58183959-58183960	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs138313196	chr6:58183974-58183975	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs549975959	chr6:58183981-58183982	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs571473128	chr6:58183984-58183985	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs188013655	chr6:58184002-58184003	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs12661590	chr6:58184032-58184033	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs138557859	chr6:58184041-58184042	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs565664699	chr6:58184053-58184054	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs372472027	chr6:58184083-58184084	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs9500352	chr6:58184108-58184109	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs554632098	chr6:58184135-58184136	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs576020524	chr6:58184136-58184137	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs528651240	chr6:58184197-58184198	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs558678034	chr6:58184212-58184213	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs577031587	chr6:58184222-58184223	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Neuroblastoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Systemic lupus erythematosus	17503323	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	16608533	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Myelofibrosis	22110671	CNVD
small cell lung cancer	20016488	CNVD
Ovarian cancer	21720365	CNVD
Schizophrenia	20967226	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Non-syndromic sensorineural hearing loss	17431168	CNVD

Chromatin state (count:724 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:58198400-58201000	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr6:58199000-58200000	ZNF genes & repeats	Fetal Lung	lung
3	chr6:58199200-58199800	ZNF genes & repeats	Duodenum Mucosa	Duodenum
4	chr6:58199200-58199800	ZNF genes & repeats	Dnd41	blood
5	chr6:58199400-58200000	ZNF genes & repeats	Fetal Heart	heart
6	chr6:58199800-58200000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:58226400-58228200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr6:58226800-58227000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr6:58227000-58227400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr6:58237800-58245200	Weak transcription	Skeletal Muscle Female	skeletal muscle
11	chr6:58237800-58253400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr6:58238000-58245000	Weak transcription	Fetal Stomach	stomach
13	chr6:58238000-58252600	Weak transcription	Primary T cells fromperipheralblood	blood
14	chr6:58238000-58252800	Weak transcription	Fetal Intestine Large	intestine
15	chr6:58240800-58245800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr6:58243000-58250200	Weak transcription	Liver	Liver
17	chr6:58243000-58272800	Weak transcription	Fetal Intestine Small	intestine
18	chr6:58243800-58246000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr6:58243800-58250400	Weak transcription	Primary T cells from cord blood	blood
20	chr6:58243800-58252800	Weak transcription	Rectal Smooth Muscle	rectum
21	chr6:58243800-58254400	Weak transcription	Primary T helper cells fromperipheralblood	blood
22	chr6:58244000-58248600	Weak transcription	Adipose Nuclei	Adipose
23	chr6:58244000-58248600	Weak transcription	Lung	lung
24	chr6:58244000-58249000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
25	chr6:58244000-58250000	Weak transcription	Spleen	Spleen
26	chr6:58244000-58250200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
27	chr6:58244000-58250200	Weak transcription	Fetal Muscle Leg	muscle
28	chr6:58244000-58250200	Weak transcription	Ovary	ovary
29	chr6:58244000-58250400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr6:58244000-58250400	Weak transcription	Fetal Lung	lung
31	chr6:58244000-58252600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr6:58244000-58252800	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr6:58244000-58252800	Weak transcription	Thymus	Thymus
34	chr6:58244000-58253000	Weak transcription	Brain Cingulate Gyrus	brain
35	chr6:58244000-58254600	Weak transcription	Brain Anterior Caudate	brain
36	chr6:58244000-58258600	Weak transcription	Pancreas	Pancrea
37	chr6:58244000-58272400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr6:58244200-58252400	Weak transcription	Monocytes-CD14+_RO01746	blood
39	chr6:58244200-58287200	Weak transcription	Right Ventricle	heart
40	chr6:58244400-58272600	Weak transcription	Placenta Amnion	Placenta Amnion
41	chr6:58244600-58247000	Weak transcription	Osteobl	bone
42	chr6:58244600-58249800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
43	chr6:58244600-58250200	Weak transcription	Colon Smooth Muscle	Colon
44	chr6:58244600-58252600	Weak transcription	Brain Hippocampus Middle	brain
45	chr6:58244600-58253000	Weak transcription	Stomach Smooth Muscle	stomach
46	chr6:58244600-58254400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr6:58244600-58255400	Weak transcription	Brain Germinal Matrix	brain
48	chr6:58244800-58273000	Weak transcription	Brain Inferior Temporal Lobe	brain
49	chr6:58245000-58245800	Strong transcription	Fetal Stomach	stomach
50	chr6:58245200-58245600	Strong transcription	Skeletal Muscle Female	skeletal muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links