Variant report

Variant	nsv1026836
Chromosome Location	chr6:70727747-70849014
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:70818167-70818367	HepG2	liver:	n/a	n/a
2	ATF2	chr6:70841427-70841869	GM12878	blood:	n/a	n/a
3	ATF2	chr6:70841263-70841940	GM12878	blood:	n/a	n/a
4	BACH1	chr6:70845753-70845997	H1-hESC	embryonic stem cell:	n/a	n/a
5	BATF	chr6:70841450-70841820	GM12878	blood:	n/a	chr6:70841650-70841661
6	BATF	chr6:70841449-70841794	GM12878	blood:	n/a	chr6:70841650-70841661
7	BCLAF1	chr6:70841257-70841856	GM12878	blood:	n/a	chr6:70841650-70841659 chr6:70841338-70841347
8	BHLHE40	chr6:70824222-70824255	K562	blood:	n/a	n/a
9	BRCA1	chr6:70818225-70818460	H1-hESC	embryonic stem cell:	n/a	n/a
10	CEBPB	chr6:70758932-70759235	IMR90	lung:	n/a	chr6:70759072-70759081 chr6:70759072-70759081 chr6:70759070-70759083 chr6:70759072-70759081
11	CEBPB	chr6:70795676-70795976	HepG2	liver:	n/a	chr6:70795830-70795841
12	CEBPB	chr6:70758960-70759210	H1-hESC	embryonic stem cell:	n/a	chr6:70759072-70759081 chr6:70759072-70759081 chr6:70759070-70759083 chr6:70759072-70759081
13	CEBPB	chr6:70758953-70759232	K562	blood:	n/a	chr6:70759072-70759081 chr6:70759072-70759081 chr6:70759070-70759083 chr6:70759072-70759081
14	CEBPB	chr6:70758969-70759232	HepG2	liver:	n/a	chr6:70759072-70759081 chr6:70759072-70759081 chr6:70759070-70759083 chr6:70759072-70759081
15	CHD2	chr6:70814188-70814348	K562	blood:	n/a	n/a
16	CTCF	chr6:70818300-70818450	AG09309	skin:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
17	CTCF	chr6:70813780-70813930	GM12864	blood:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
18	CTCF	chr6:70813800-70813950	Caco-2	colon:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
19	CTCF	chr6:70813820-70813970	AG04449	skin:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
20	CTCF	chr6:70806025-70806073	Fibrobl	skin:	n/a	n/a
21	CTCF	chr6:70813698-70814070	K562	blood:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
22	CTCF	chr6:70818260-70818410	GM12866	blood:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
23	CTCF	chr6:70818283-70818435	GM13976	blood:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
24	CTCF	chr6:70813780-70813930	NHLF	lung:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
25	CTCF	chr6:70818280-70818430	BJ	skin:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
26	CTCF	chr6:70813800-70813950	K562	blood:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
27	CTCF	chr6:70813800-70813950	GM06990	blood:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
28	CTCF	chr6:70818260-70818410	MCF-7	breast:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
29	CTCF	chr6:70813840-70813970	GM19240	blood:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
30	CTCF	chr6:70818147-70818550	K562	blood:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
31	CTCF	chr6:70813900-70814050	GM12872	blood:	n/a	n/a
32	CTCF	chr6:70818241-70818449	GM13977	blood:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
33	CTCF	chr6:70817856-70818544	GM12878	blood:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
34	CTCF	chr6:70818232-70818443	Hela-S3	cervix:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
35	CTCF	chr6:70818260-70818410	Hela-S3	cervix:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
36	CTCF	chr6:70813841-70813965	MCF-7	breast:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
37	CTCF	chr6:70818340-70818490	NHLF	lung:	n/a	n/a
38	CTCF	chr6:70813820-70813970	HL-60	blood:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
39	CTCF	chr6:70818160-70818310	HCM	heart:	n/a	n/a
40	CTCF	chr6:70818237-70818449	GM10266	blood:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
41	CTCF	chr6:70813840-70813990	HCPEpiC	choroid plexus:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
42	CTCF	chr6:70818280-70818430	HA-sp	spinal cord:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
43	CTCF	chr6:70813780-70813930	GM12868	blood:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
44	CTCF	chr6:70818300-70818450	AG04450	lung:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
45	CTCF	chr6:70818300-70818450	HMF	breast:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
46	CTCF	chr6:70818220-70818370	GM12873	blood:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
47	CTCF	chr6:70818240-70818390	HUVEC	blood vessel:	n/a	chr6:70818323-70818344 chr6:70818329-70818345
48	CTCF	chr6:70813840-70813990	HCM	heart:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
49	CTCF	chr6:70813820-70813970	MCF-7	breast:	n/a	chr6:70813880-70813901 chr6:70813878-70813896 chr6:70813883-70813891
50	CTCF	chr6:70818260-70818410	HPAF	blood vessel:	n/a	chr6:70818323-70818344 chr6:70818329-70818345

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:70817196-70817246	AoSMC	blood vessel:	n/a
2	chr6:70817196-70817246	GM12892	blood:	n/a
3	chr6:70817196-70817246	HCM	heart:	n/a
4	chr6:70817196-70817246	HCT-116	colon:	n/a
5	chr6:70762024-70762074	HCPEpiC	choroid plexus:	n/a
6	chr6:70762024-70762074	NT2-D1	testis:	n/a
7	chr6:70817196-70817246	HNPCEpiC	eye:	n/a
8	chr6:70817196-70817246	Jurkat	blood:	n/a
9	chr6:70817196-70817246	PANC-1	pancreas:	n/a
10	chr6:70762024-70762074	HCF	heart:	n/a
11	chr6:70762024-70762074	LNCaP	prostate:	n/a
12	chr6:70762024-70762074	HRE	kidney:	n/a
13	chr6:70762024-70762074	H1-hESC	embryonic stem cell:	embryo
14	chr6:70817196-70817246	CMK	blood:	n/a
15	chr6:70762024-70762074	GM12891	blood:	n/a
16	chr6:70817196-70817246	SKMC	muscle:	n/a
17	chr6:70762024-70762074	BE2_C	brain:	n/a
18	chr6:70762024-70762074	HCT-116	colon:	n/a
19	chr6:70762024-70762074	HIPEpiC	eye:	n/a
20	chr6:70817196-70817246	NH-A	brain:	n/a
21	chr6:70817196-70817246	HPAEpiC	pulmonary alveolar:	n/a
22	chr6:70762024-70762074	PrEC	prostate:	n/a
23	chr6:70762024-70762074	HEEpiC	esophagus:	n/a
24	chr6:70762024-70762074	SK-N-SH	brain:	n/a
25	chr6:70762024-70762074	HUVEC	blood vessel:	n/a
26	chr6:70762024-70762074	MCF-7	breast:	n/a
27	chr6:70817196-70817246	AG04449	skin:	fetal
28	chr6:70817196-70817246	BJ	skin:	n/a
29	chr6:70762024-70762074	IMR90	lung:	fetal
30	chr6:70762024-70762074	ECC-1	luminal epithelium:	n/a
31	chr6:70762024-70762074	HepG2	liver:	n/a
32	chr6:70762024-70762074	SKMC	muscle:	n/a
33	chr6:70817196-70817246	NHBE	bronchial:	n/a
34	chr6:70762024-70762074	AG04450	lung:	fetal
35	chr6:70762024-70762074	GM12878	blood:	n/a
36	chr6:70817196-70817246	HCPEpiC	choroid plexus:	n/a
37	chr6:70762024-70762074	GM06990	blood:	n/a
38	chr6:70762024-70762074	CMK	blood:	n/a
39	chr6:70817196-70817246	AG09319	gingival:	n/a
40	chr6:70762024-70762074	MCF10A-Er-Src	breast:	n/a
41	chr6:70817196-70817246	ProgFib	skin:	n/a
42	chr6:70817196-70817246	PrEC	prostate:	n/a
43	chr6:70817196-70817246	Hela-S3	cervix:	n/a
44	chr6:70817196-70817246	MCF10A-Er-Src	breast:	n/a
45	chr6:70817196-70817246	BE2_C	brain:	n/a
46	chr6:70817196-70817246	AG10803	skin:	n/a
47	chr6:70762024-70762074	SAEC	small airway:	n/a
48	chr6:70817196-70817246	GM12891	blood:	n/a
49	chr6:70762024-70762074	HRPEpiC	eye:	n/a
50	chr6:70817196-70817246	AG04450	lung:	fetal

No.	Distal block	Cell Line	Cell type
1	chr6:70842057..70844688-chr6:70846229..70848212,2	K562	blood:
2	chr6:70747430..70749760-chr6:70755269..70757566,2	K562	blood:
3	chr6:70820840..70823545-chr6:70826829..70829430,2	K562	blood:
4	chr6:70820813..70823545-chr6:70826168..70828329,2	K562	blood:
5	chr6:70842057..70844688-chr6:70846229..70848212,2	K562	blood:
6	chr6:70545400..70546548-chr6:70813349..70814369,4	MCF-7	breast:
7	chr6:70818751..70820425-chr6:70822402..70825212,2	K562	blood:
8	chr6:70815895..70817673-chr6:70824644..70826434,2	K562	blood:
9	chr6:70813298..70814134-chr6:70875999..70876856,3	MCF-7	breast:
10	chr6:70810241..70812100-chr6:70815052..70817489,2	K562	blood:
11	chr6:70818751..70820425-chr6:70822402..70825212,2	K562	blood:
12	chr6:70820840..70823545-chr6:70826829..70829430,2	K562	blood:
13	chr6:70832687..70835312-chr6:70837152..70839184,2	K562	blood:
14	chr6:70747430..70749760-chr6:70755269..70757566,2	K562	blood:
15	chr6:70826995..70829549-chr6:70829870..70831870,2	K562	blood:
16	chr6:70810241..70812100-chr6:70815052..70817489,2	K562	blood:
17	chr6:70820813..70823545-chr6:70826168..70828329,2	K562	blood:
18	chr6:70832600..70834187-chr6:70837309..70839184,2	K562	blood:
19	chr6:70733478..70735674-chr6:111948074..111949663,2	MCF-7	breast:
20	chr6:70813406..70814321-chr6:70875992..70876918,4	MCF-7	breast:
21	chr6:70815895..70817673-chr6:70824644..70826434,2	K562	blood:
22	chr6:69586886..69587416-chr6:70818041..70818795,2	MCF-7	breast:
23	chr6:70824487..70826797-chr6:70830280..70832530,2	K562	blood:
24	chr6:70838182..70840672-chr6:70841936..70844515,2	K562	blood:
25	chr6:70824487..70826202-chr6:70830280..70833142,2	K562	blood:
26	chr20:52491204..52492000-chr6:70763728..70764531,2	MCF-7	breast:
27	chr6:70832600..70834187-chr6:70837309..70839184,2	K562	blood:
28	chr6:70832687..70835312-chr6:70837152..70839184,2	K562	blood:
29	chr6:70442277..70442790-chr6:70817841..70818470,2	MCF-7	breast:
30	chr6:70838182..70840672-chr6:70841936..70844515,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-COL9A1-2	chr6:70808282-70808568	NONHSAT113427

Variant related genes	Relation type
COL19A1	TF binding region
RPL37P15	TF binding region
COL19A1	CpG island
RPL37P15	CpG island
ENSG00000082293	chromatin interactions

Extended variants
information (count: 4579 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:4579 , 50 per page) page: 1 2 3 4 5 6 7 ... 92

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs565367712	chr6:70727803-70727804	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs561746258	chr6:70727823-70727824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs527753212	chr6:70727831-70727832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs547503152	chr6:70727843-70727844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs567283669	chr6:70727998-70727999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs532683626	chr6:70728008-70728009	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs189597792	chr6:70728087-70728088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs549944474	chr6:70728095-70728096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs77503495	chr6:70728102-70728103	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs181807489	chr6:70728115-70728116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs562723288	chr6:70728123-70728124	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs558688615	chr6:70728174-70728175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs9364071	chr6:70728182-70728183	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs978290	chr6:70728202-70728203	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs554707045	chr6:70728222-70728223	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs35313628	chr6:70728243-70728244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs574632193	chr6:70728264-70728265	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs62420127	chr6:70728291-70728292	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs556716761	chr6:70728361-70728362	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs576654156	chr6:70728369-70728370	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs77554293	chr6:70728408-70728409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs527642177	chr6:70728420-70728421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs552301992	chr6:70728442-70728443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs565444133	chr6:70728475-70728476	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs9364072	chr6:70728518-70728519	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs373759317	chr6:70728536-70728537	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs541083353	chr6:70728559-70728560	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs12210952	chr6:70728582-70728583	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs978291	chr6:70728672-70728673	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs114028095	chr6:70728679-70728680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs376780080	chr6:70728683-70728684	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs532400158	chr6:70728735-70728736	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs144810096	chr6:70728782-70728783	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs565832342	chr6:70728787-70728788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs186441010	chr6:70728802-70728803	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs190461649	chr6:70728819-70728820	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs75515009	chr6:70728880-70728881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs182913668	chr6:70728881-70728882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs537171488	chr6:70728885-70728886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs56009424	chr6:70728943-70728944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs79590151	chr6:70728980-70728981	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs75322589	chr6:70728989-70728990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs545644702	chr6:70728993-70728994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs530850777	chr6:70729022-70729023	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs111865181	chr6:70729095-70729096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs185270064	chr6:70729109-70729110	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs569062015	chr6:70729139-70729140	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs9364073	chr6:70729172-70729173	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs191260497	chr6:70729182-70729183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs550770763	chr6:70729192-70729193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Ovarian cancer	17437010	CNVD
Myelofibrosis	22110671	CNVD
Glioma	17123091	CNVD
Mental retardation	17124404	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Multiple myeloma	16616336	CNVD
Acute myeloid leukemia	16864856	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:297 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70716200-70734000	Weak transcription	Primary B cells from cord blood	blood
2	chr6:70729200-70733400	Weak transcription	Primary B cells from peripheral blood	blood
3	chr6:70733000-70748600	Weak transcription	GM12878-XiMat	blood
4	chr6:70733400-70737000	Strong transcription	Primary B cells from peripheral blood	blood
5	chr6:70734000-70735600	Strong transcription	Primary B cells from cord blood	blood
6	chr6:70735600-70737800	Weak transcription	Primary B cells from cord blood	blood
7	chr6:70736200-70736400	Enhancers	Fetal Lung	lung
8	chr6:70736600-70737800	Weak transcription	Fetal Lung	lung
9	chr6:70737000-70739000	Weak transcription	Primary B cells from peripheral blood	blood
10	chr6:70737800-70738600	Enhancers	Fetal Lung	lung
11	chr6:70737800-70745200	Strong transcription	Primary B cells from cord blood	blood
12	chr6:70738600-70739000	Weak transcription	Fetal Lung	lung
13	chr6:70739000-70739600	Enhancers	Fetal Lung	lung
14	chr6:70739000-70742000	Strong transcription	Primary B cells from peripheral blood	blood
15	chr6:70739600-70743200	Weak transcription	Fetal Lung	lung
16	chr6:70742000-70743400	Weak transcription	Primary B cells from peripheral blood	blood
17	chr6:70743200-70743800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr6:70743200-70745400	Enhancers	Fetal Lung	lung
19	chr6:70743400-70750600	Strong transcription	Primary B cells from peripheral blood	blood
20	chr6:70743800-70744800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr6:70743800-70745000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr6:70744000-70744800	Enhancers	Fetal Brain Female	brain
23	chr6:70744200-70745000	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr6:70744200-70745000	Enhancers	Fetal Brain Male	brain
25	chr6:70744800-70745000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr6:70745200-70748200	Weak transcription	Primary B cells from cord blood	blood
27	chr6:70748200-70750800	Strong transcription	Primary B cells from cord blood	blood
28	chr6:70748600-70749400	Strong transcription	GM12878-XiMat	blood
29	chr6:70749200-70749400	Flanking Active TSS	HSMMtube	muscle
30	chr6:70749400-70758400	Weak transcription	GM12878-XiMat	blood
31	chr6:70750600-70752600	Weak transcription	Primary B cells from peripheral blood	blood
32	chr6:70750800-70752000	Weak transcription	Primary B cells from cord blood	blood
33	chr6:70752000-70756400	Strong transcription	Primary B cells from cord blood	blood
34	chr6:70752600-70756200	Strong transcription	Primary B cells from peripheral blood	blood
35	chr6:70756200-70761200	Weak transcription	Primary B cells from peripheral blood	blood
36	chr6:70756400-70761200	Weak transcription	Primary B cells from cord blood	blood
37	chr6:70761200-70761800	Strong transcription	Primary B cells from peripheral blood	blood
38	chr6:70761200-70762200	Strong transcription	Primary B cells from cord blood	blood
39	chr6:70761800-70762400	Enhancers	iPS-15b Cell Line	embryonic stem cell
40	chr6:70761800-70770000	Weak transcription	Primary B cells from peripheral blood	blood
41	chr6:70762200-70766200	Weak transcription	Primary B cells from cord blood	blood
42	chr6:70766200-70767400	Strong transcription	Primary B cells from cord blood	blood
43	chr6:70767000-70769600	Enhancers	Fetal Heart	heart
44	chr6:70767400-70809600	Weak transcription	Primary B cells from cord blood	blood
45	chr6:70768600-70769000	Enhancers	Fetal Lung	lung
46	chr6:70769000-70769800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr6:70769400-70769600	Enhancers	Fetal Lung	lung
48	chr6:70770000-70770600	Strong transcription	Primary B cells from peripheral blood	blood
49	chr6:70770600-70777600	Weak transcription	Primary B cells from peripheral blood	blood
50	chr6:70773800-70788400	Weak transcription	GM12878-XiMat	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links