Variant report

Variant	nsv1026918
Chromosome Location	chr8:10359634-10390452
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:188)
CpG islands
(count:550)
Chromatin interactive
region (count:7)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:188 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr8:10368656-10369306	GM12878	blood:	n/a	n/a
2	ATF2	chr8:10368591-10369254	GM12878	blood:	n/a	n/a
3	BATF	chr8:10386055-10386371	GM12878	blood:	n/a	n/a
4	BATF	chr8:10368641-10369256	GM12878	blood:	n/a	n/a
5	BATF	chr8:10368885-10369192	GM12878	blood:	n/a	n/a
6	BATF	chr8:10386050-10386295	GM12878	blood:	n/a	n/a
7	BCL11A	chr8:10368645-10369160	GM12878	blood:	n/a	n/a
8	BCL3	chr8:10368667-10369188	GM12878	blood:	n/a	n/a
9	BCLAF1	chr8:10367678-10368273	GM12878	blood:	n/a	n/a
10	BCLAF1	chr8:10368711-10369356	GM12878	blood:	n/a	n/a
11	BHLHE40	chr8:10370616-10370942	K562	blood:	n/a	chr8:10370769-10370778 chr8:10370768-10370777 chr8:10370762-10370783 chr8:10370766-10370779 chr8:10370768-10370777
12	BHLHE40	chr8:10368316-10369437	GM12878	blood:	n/a	n/a
13	BHLHE40	chr8:10386039-10386087	GM12878	blood:	n/a	n/a
14	BRCA1	chr8:10385147-10385231	Hela-S3	cervix:	n/a	n/a
15	CEBPB	chr8:10381394-10381407	H1-hESC	embryonic stem cell:	n/a	n/a
16	CEBPB	chr8:10380923-10381178	HepG2	liver:	n/a	n/a
17	CEBPB	chr8:10389568-10389719	HepG2	liver:	n/a	n/a
18	CEBPB	chr8:10368573-10369225	GM12878	blood:	n/a	n/a
19	CEBPB	chr8:10380904-10381188	A549	lung:	n/a	n/a
20	CEBPB	chr8:10389550-10389819	H1-hESC	embryonic stem cell:	n/a	chr8:10389716-10389729
21	CEBPB	chr8:10389562-10389696	IMR90	lung:	n/a	n/a
22	CEBPB	chr8:10367768-10368017	IMR90	lung:	n/a	n/a
23	CEBPB	chr8:10382990-10383045	HepG2	liver:	n/a	n/a
24	CEBPB	chr8:10381086-10381112	K562	blood:	n/a	n/a
25	CHD1	chr8:10370376-10370477	GM12878	blood:	n/a	n/a
26	CHD2	chr8:10386087-10386225	GM12878	blood:	n/a	n/a
27	CHD2	chr8:10370220-10370671	K562	blood:	n/a	n/a
28	CHD2	chr8:10368806-10369526	GM12878	blood:	n/a	n/a
29	CTCF	chr8:10389559-10389834	GM12878	blood:	n/a	n/a
30	CTCF	chr8:10389520-10389670	HMEC	breast:	n/a	n/a
31	CTCF	chr8:10389600-10389750	WERI-Rb-1	eye:	n/a	n/a
32	CTCF	chr8:10361423-10361471	GM13976	blood:	n/a	n/a
33	CTCF	chr8:10389580-10389730	SAEC	small airway:	n/a	n/a
34	CTCF	chr8:10384460-10384571	Medullo	brain:	n/a	n/a
35	CTCF	chr8:10389594-10389707	NHEK	skin:	n/a	n/a
36	CTCF	chr8:10380449-10380520	GM10248	blood:	n/a	n/a
37	CTCF	chr8:10384481-10384530	H1-hESC	embryonic stem cell:	n/a	n/a
38	CTCF	chr8:10384680-10384830	Hela-S3	cervix:	n/a	n/a
39	CTCF	chr8:10389587-10389711	Medullo	brain:	n/a	n/a
40	CTCF	chr8:10384472-10384548	MCF-7	breast:	n/a	n/a
41	CTCF	chr8:10389500-10389650	HRPEpiC	eye:	n/a	n/a
42	CTCF	chr8:10384476-10384546	MCF-7	breast:	n/a	n/a
43	CTCF	chr8:10389602-10389757	Hela-S3	cervix:	n/a	n/a
44	CTCF	chr8:10389588-10389711	K562	blood:	n/a	n/a
45	CUX1	chr8:10368281-10369215	GM12878	blood:	n/a	n/a
46	EBF1	chr8:10367524-10368059	GM12878	blood:	n/a	n/a
47	EBF1	chr8:10385967-10386261	GM12878	blood:	n/a	n/a
48	EBF1	chr8:10368756-10369402	GM12878	blood:	n/a	n/a
49	EBF1	chr8:10368860-10369400	GM12878	blood:	n/a	n/a
50	EGR1	chr8:10368649-10368973	GM12878	blood:	n/a	chr8:10368810-10368824

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:10383156-10383206	MCF10A-Er-Src	breast:	n/a
2	chr8:10383156-10383206	MCF10A-Er-Src	breast:	n/a
3	chr8:10386222-10386272	Caco-2	colon:	n/a
4	chr8:10383071-10383121	PANC-1	pancreas:	n/a
5	chr8:10382165-10382215	H1-hESC	embryonic stem cell:	embryo
6	chr8:10386039-10386089	LNCaP	prostate:	n/a
7	chr8:10383156-10383206	Jurkat	blood:	n/a
8	chr8:10383156-10383206	NT2-D1	testis:	n/a
9	chr8:10383156-10383206	HPAEpiC	pulmonary alveolar:	n/a
10	chr8:10383763-10383813	GM12892	blood:	n/a
11	chr8:10382165-10382215	HCPEpiC	choroid plexus:	n/a
12	chr8:10386222-10386272	Jurkat	blood:	n/a
13	chr8:10382165-10382215	AG04449	skin:	fetal
14	chr8:10383763-10383813	GM12878	blood:	n/a
15	chr8:10383156-10383206	H1-hESC	embryonic stem cell:	embryo
16	chr8:10383156-10383206	HEEpiC	esophagus:	n/a
17	chr8:10383156-10383206	AG04450	lung:	fetal
18	chr8:10382165-10382215	HMEC	breast:	n/a
19	chr8:10383071-10383121	HIPEpiC	eye:	n/a
20	chr8:10386222-10386272	NHBE	bronchial:	n/a
21	chr8:10381792-10381842	AG04450	lung:	fetal
22	chr8:10386846-10386896	HEK293	kidney:	embryo
23	chr8:10386039-10386089	T-47D	breast:	n/a
24	chr8:10386846-10386896	SKMC	muscle:	n/a
25	chr8:10386039-10386089	SK-N-SH	brain:	n/a
26	chr8:10381792-10381842	NHBE	bronchial:	n/a
27	chr8:10381792-10381842	HEEpiC	esophagus:	n/a
28	chr8:10381792-10381842	CMK	blood:	n/a
29	chr8:10386846-10386896	AG10803	skin:	n/a
30	chr8:10386222-10386272	PFSK-1	brain:	n/a
31	chr8:10386039-10386089	SKMC	muscle:	n/a
32	chr8:10382165-10382215	Hela-S3	cervix:	n/a
33	chr8:10383763-10383813	HMEC	breast:	n/a
34	chr8:10386846-10386896	NH-A	brain:	n/a
35	chr8:10386222-10386272	SK-N-SH_RA	brain:	n/a
36	chr8:10386874-10386924	AoSMC	blood vessel:	n/a
37	chr8:10381792-10381842	HIPEpiC	eye:	n/a
38	chr8:10386846-10386896	HEEpiC	esophagus:	n/a
39	chr8:10386039-10386089	AG09309	skin:	n/a
40	chr8:10386222-10386272	HCM	heart:	n/a
41	chr8:10383763-10383813	SK-N-MC	brain:	n/a
42	chr8:10386846-10386896	PFSK-1	brain:	n/a
43	chr8:10383763-10383813	PFSK-1	brain:	n/a
44	chr8:10383763-10383813	HUVEC	blood vessel:	n/a
45	chr8:10383156-10383206	LNCaP	prostate:	n/a
46	chr8:10386846-10386896	HNPCEpiC	eye:	n/a
47	chr8:10386039-10386089	HEEpiC	esophagus:	n/a
48	chr8:10386222-10386272	U87	brain:	n/a
49	chr8:10383763-10383813	Hela-S3	cervix:	n/a
50	chr8:10386874-10386924	IMR90	lung:	fetal

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:10369277..10371186-chr8:10371806..10374192,2	K562	blood:
2	chr8:10374624..10377226-chr8:10381375..10383874,2	K562	blood:
3	chr8:10375020..10377779-chr8:10377890..10379584,2	MCF-7	breast:
4	chr8:10369277..10371186-chr8:10371806..10374192,2	K562	blood:
5	chr8:10374624..10377226-chr8:10381375..10383874,2	K562	blood:
6	chr8:10354981..10356496-chr8:10377351..10379387,2	K562	blood:
7	chr8:10385003..10387503-chr8:10387534..10389868,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP1L1-6	chr8:10379007-10379166	ucscGeneNc_uc010lru_1
2	lnc-RP1L1-2	chr8:10375404-10375525	ENSG00000253649.1
3	lnc-RP1L1-6	chr8:10377798-10378151	ucscGeneNc_uc010lru_1

No data

Variant related genes	Relation type
PRSS55	TF binding region
PRSS51	TF binding region
PRSS55	CpG island
PRSS51	CpG island
ENSG00000184647	chromatin interactions
ENSG00000253649	chromatin interactions

Extended variants
information (count: 1908 )
Associated
traits (count: 137 )

Variant overlapped rSNPs/rCNVs (count:1908 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4582517	chr8:10359634-10359635	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs530517185	chr8:10359641-10359642	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs550351112	chr8:10359646-10359647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs570314941	chr8:10359658-10359659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs187436932	chr8:10359672-10359673	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs374325417	chr8:10359685-10359686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs143206848	chr8:10359706-10359707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs566297132	chr8:10359709-10359710	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs534931362	chr8:10359713-10359714	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs367778958	chr8:10359716-10359717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs547062097	chr8:10359725-10359726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs571699276	chr8:10359729-10359730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs537407650	chr8:10359744-10359745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs370081009	chr8:10359765-10359766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs148297438	chr8:10359766-10359767	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs140446767	chr8:10359767-10359768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs7462362	chr8:10359774-10359775	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs147051124	chr8:10359788-10359789	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs5014827	chr8:10359793-10359794	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs564989512	chr8:10359796-10359797	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs7462370	chr8:10359820-10359821	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs544152825	chr8:10359860-10359861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs554090336	chr8:10359894-10359895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs560881345	chr8:10359914-10359915	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs191922715	chr8:10359932-10359933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs368731065	chr8:10359948-10359949	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs529475229	chr8:10359955-10359956	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs549277949	chr8:10359956-10359957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs200442638	chr8:10359970-10359971	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs10092761	chr8:10359987-10359988	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs183998288	chr8:10359990-10359991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs188732711	chr8:10359993-10359994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs551688889	chr8:10359995-10359996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs571677041	chr8:10359996-10359997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs4398869	chr8:10360011-10360012	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs4333548	chr8:10360017-10360018	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs5889336	chr8:10360037-10360038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs34219309	chr8:10360054-10360055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs567301922	chr8:10360088-10360089	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs572358516	chr8:10360100-10360101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs149429228	chr8:10360101-10360102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs5002891	chr8:10360110-10360111	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs570904406	chr8:10360117-10360118	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs573102118	chr8:10360125-10360126	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs545141759	chr8:10360127-10360128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs575262943	chr8:10360134-10360135	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs372540961	chr8:10360144-10360145	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs200196273	chr8:10360170-10360171	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs6601477	chr8:10360188-10360189	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs184461997	chr8:10360193-10360194	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:137)

Disease	PMID	Source
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Autism	22495311	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	21990379	CNVD
Psoriasis	20403174	CNVD
Psoriasis	20663923	CNVD
Crohn''s disease	16909382	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Crohn''s disease	20877625	CNVD
Inflammatory disorder	20877625	CNVD
Cardiac defect	21933911	CNVD
Psoriasis	18059266	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Psoriasis	20877625	CNVD
Mental retardation	17847001	CNVD
Prostate cancer	17217626	CNVD
Schizophrenia	21399695	CNVD
Colorectal cancer	21128281	CNVD
Colorectal cancer	19455253	CNVD
Psoriasis	18848619	CNVD
Squamous cell cancer	19047905	CNVD
Colorectal cancer	17229543	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Developmental disorder	20461109	CNVD
abnormal development	18461090	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Glioblastoma multiforme	21138945	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Epilepsy	20502679	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Gastric cancer	21811585	CNVD
Osteosarcoma	21215367	CNVD

Chromatin state (count:145 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:10356400-10368800	Weak transcription	Brain Germinal Matrix	brain
2	chr8:10361000-10368400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:10367400-10367600	Enhancers	GM12878-XiMat	blood
4	chr8:10367400-10367800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
5	chr8:10367400-10367800	Enhancers	Duodenum Smooth Muscle	Duodenum
6	chr8:10367600-10367800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr8:10367600-10367800	Flanking Active TSS	Colon Smooth Muscle	Colon
8	chr8:10367600-10367800	Enhancers	Fetal Lung	lung
9	chr8:10367600-10368000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr8:10367600-10368200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
11	chr8:10367600-10368200	Active TSS	Duodenum Mucosa	Duodenum
12	chr8:10367600-10368200	Active TSS	Osteobl	bone
13	chr8:10367600-10368400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr8:10367600-10368400	Active TSS	NHDF-Ad	bronchial
15	chr8:10367600-10368400	Active TSS	NHLF	lung
16	chr8:10367600-10368600	Active TSS	Rectal Mucosa Donor 29	rectum
17	chr8:10367600-10368600	Active TSS	Rectal Smooth Muscle	rectum
18	chr8:10367600-10370200	Flanking Active TSS	GM12878-XiMat	blood
19	chr8:10367800-10368000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
20	chr8:10367800-10368000	Enhancers	Brain Hippocampus Middle	brain
21	chr8:10367800-10368000	Bivalent Enhancer	HMEC	breast
22	chr8:10367800-10368200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr8:10367800-10368200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr8:10367800-10368200	Active TSS	Primary T cells fromperipheralblood	blood
25	chr8:10367800-10368200	Active TSS	Primary T helper cells PMA-I stimulated	--
26	chr8:10367800-10368200	Active TSS	Primary T helper cells fromperipheralblood	blood
27	chr8:10367800-10368200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr8:10367800-10368200	Active TSS	Colon Smooth Muscle	Colon
29	chr8:10367800-10368200	Active TSS	Duodenum Smooth Muscle	Duodenum
30	chr8:10367800-10368200	Flanking Active TSS	Fetal Lung	lung
31	chr8:10367800-10368400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr8:10367800-10368400	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
33	chr8:10367800-10368400	Active TSS	Primary T regulatory cells fromperipheralblood	blood
34	chr8:10367800-10370000	Enhancers	Fetal Kidney	kidney
35	chr8:10368000-10368200	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
36	chr8:10368000-10368200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr8:10368000-10369000	Weak transcription	Brain Hippocampus Middle	brain
38	chr8:10368000-10369600	Enhancers	Fetal Stomach	stomach
39	chr8:10368000-10370600	Enhancers	Cortex derived primary cultured neurospheres	brain
40	chr8:10368200-10368600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
41	chr8:10368200-10368800	Enhancers	HUES6 Cell Line	embryonic stem cell
42	chr8:10368200-10368800	Enhancers	Duodenum Mucosa	Duodenum
43	chr8:10368200-10369000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
44	chr8:10368200-10369000	Enhancers	Fetal Lung	lung
45	chr8:10368200-10369200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
46	chr8:10368200-10369400	Enhancers	Colon Smooth Muscle	Colon
47	chr8:10368200-10370200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr8:10368400-10368600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
49	chr8:10368400-10368600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
50	chr8:10368400-10368600	Enhancers	Rectal Mucosa Donor 31	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links