Variant report

Variant	nsv1027260
Chromosome Location	chr9:12196141-12709959
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:12702242-12702514	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:12328968-12329168	HepG2	liver:	n/a	n/a
3	ATF3	chr9:12708586-12708908	HCT-116	colon:	n/a	n/a
4	BACH1	chr9:12567176-12567212	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr9:12604207-12604421	H1-hESC	embryonic stem cell:	n/a	chr9:12604278-12604292
6	BACH1	chr9:12469180-12469392	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr9:12465730-12465736	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr9:12653013-12653212	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr9:12497880-12498136	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr9:12292536-12292567	H1-hESC	embryonic stem cell:	n/a	n/a
11	BATF	chr9:12230772-12231081	GM12878	blood:	n/a	n/a
12	BATF	chr9:12329455-12329670	GM12878	blood:	n/a	n/a
13	BCLAF1	chr9:12329426-12329668	GM12878	blood:	n/a	n/a
14	BHLHE40	chr9:12328995-12329158	K562	blood:	n/a	n/a
15	BHLHE40	chr9:12414650-12414651	HepG2	liver:	n/a	n/a
16	BHLHE40	chr9:12328884-12329725	HepG2	liver:	n/a	n/a
17	BHLHE40	chr9:12329021-12329257	GM12878	blood:	n/a	n/a
18	BHLHE40	chr9:12612186-12612202	GM12878	blood:	n/a	n/a
19	BRCA1	chr9:12666817-12666918	H1-hESC	embryonic stem cell:	n/a	n/a
20	BRCA1	chr9:12368889-12368916	GM12878	blood:	n/a	n/a
21	CBX3	chr9:12708489-12709018	HCT-116	colon:	n/a	n/a
22	CEBPB	chr9:12607448-12607767	HepG2	liver:	n/a	chr9:12607616-12607627 chr9:12607571-12607582
23	CEBPB	chr9:12702101-12702516	A549	lung:	n/a	n/a
24	CEBPB	chr9:12539775-12539867	HepG2	liver:	n/a	n/a
25	CEBPB	chr9:12607483-12607778	IMR90	lung:	n/a	chr9:12607616-12607627 chr9:12607571-12607582
26	CEBPB	chr9:12702155-12702522	Hela-S3	cervix:	n/a	n/a
27	CEBPB	chr9:12702160-12702495	IMR90	lung:	n/a	n/a
28	CEBPB	chr9:12702152-12702503	A549	lung:	n/a	n/a
29	CEBPB	chr9:12656603-12657162	IMR90	lung:	n/a	chr9:12656979-12656988 chr9:12656681-12656694 chr9:12656979-12656988 chr9:12656977-12656990 chr9:12656681-12656692 chr9:12656979-12656988 chr9:12656979-12656988 chr9:12656977-12656988 chr9:12656681-12656694
30	CEBPB	chr9:12553870-12554030	IMR90	lung:	n/a	chr9:12553921-12553932 chr9:12553919-12553930
31	CEBPB	chr9:12447534-12447781	A549	lung:	n/a	chr9:12447635-12447646
32	CEBPB	chr9:12553807-12553971	HepG2	liver:	n/a	chr9:12553921-12553932 chr9:12553919-12553930
33	CEBPB	chr9:12473244-12473438	A549	lung:	n/a	n/a
34	CEBPB	chr9:12690305-12690523	IMR90	lung:	n/a	chr9:12690390-12690401 chr9:12690390-12690403 chr9:12690390-12690403 chr9:12690390-12690403
35	CEBPB	chr9:12503775-12504054	MCF-7	breast:	n/a	chr9:12503986-12503998
36	CEBPB	chr9:12447532-12447761	IMR90	lung:	n/a	chr9:12447635-12447646
37	CEBPB	chr9:12643730-12643980	IMR90	lung:	n/a	n/a
38	CEBPB	chr9:12503780-12504174	MCF-7	breast:	n/a	chr9:12503986-12503998
39	CEBPB	chr9:12681521-12681770	A549	lung:	n/a	chr9:12681604-12681615
40	CEBPB	chr9:12681436-12681753	ECC-1	luminal epithelium:	n/a	chr9:12681604-12681615
41	CEBPB	chr9:12450499-12450835	HepG2	liver:	n/a	chr9:12450652-12450663
42	CEBPB	chr9:12681471-12681796	Hela-S3	cervix:	n/a	chr9:12681604-12681615
43	CEBPB	chr9:12656586-12657172	HepG2	liver:	n/a	chr9:12656979-12656988 chr9:12656681-12656694 chr9:12656979-12656988 chr9:12656977-12656990 chr9:12656681-12656692 chr9:12656979-12656988 chr9:12656979-12656988 chr9:12656977-12656988 chr9:12656681-12656694
44	CEBPB	chr9:12491079-12491286	A549	lung:	n/a	n/a
45	CEBPB	chr9:12656859-12657130	Hela-S3	cervix:	n/a	chr9:12656979-12656988 chr9:12656979-12656988 chr9:12656977-12656990 chr9:12656979-12656988 chr9:12656979-12656988 chr9:12656977-12656988
46	CEBPB	chr9:12656840-12657079	H1-hESC	embryonic stem cell:	n/a	chr9:12656979-12656988 chr9:12656979-12656988 chr9:12656977-12656990 chr9:12656979-12656988 chr9:12656979-12656988 chr9:12656977-12656988
47	CEBPB	chr9:12367335-12367535	HepG2	liver:	n/a	chr9:12367443-12367454
48	CEBPB	chr9:12708603-12708891	IMR90	lung:	n/a	n/a
49	CEBPB	chr9:12288039-12288167	HepG2	liver:	n/a	n/a
50	CEBPB	chr9:12708437-12709072	HCT-116	colon:	n/a	chr9:12708963-12708975 chr9:12708893-12708906

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:12693326-12693376	HUVEC	blood vessel:	n/a
2	chr9:12704964-12705014	AG09309	skin:	n/a
3	chr9:12693326-12693376	SKMC	muscle:	n/a
4	chr9:12693326-12693376	AG10803	skin:	n/a
5	chr9:12693694-12693744	MCF10A-Er-Src	breast:	n/a
6	chr9:12693326-12693376	PrEC	prostate:	n/a
7	chr9:12693694-12693744	PrEC	prostate:	n/a
8	chr9:12693694-12693744	HEEpiC	esophagus:	n/a
9	chr9:12704964-12705014	AoSMC	blood vessel:	n/a
10	chr9:12704964-12705014	HRPEpiC	eye:	n/a
11	chr9:12704964-12705014	SK-N-SH	brain:	n/a
12	chr9:12704964-12705014	AG04450	lung:	fetal
13	chr9:12693326-12693376	Caco-2	colon:	n/a
14	chr9:12704964-12705014	GM19239	blood:	n/a
15	chr9:12704964-12705014	H1-hESC	embryonic stem cell:	embryo
16	chr9:12693694-12693744	NH-A	brain:	n/a
17	chr9:12704964-12705014	ovcar-3	ovarian:	n/a
18	chr9:12693694-12693744	GM19239	blood:	n/a
19	chr9:12693326-12693376	HIPEpiC	eye:	n/a
20	chr9:12704964-12705014	SK-N-SH_RA	brain:	n/a
21	chr9:12693694-12693744	AG09319	gingival:	n/a
22	chr9:12704964-12705014	PrEC	prostate:	n/a
23	chr9:12693326-12693376	SK-N-SH_RA	brain:	n/a
24	chr9:12704964-12705014	AG04449	skin:	fetal
25	chr9:12693694-12693744	CMK	blood:	n/a
26	chr9:12693694-12693744	HAEpiC	amniotic membrane:	n/a
27	chr9:12704964-12705014	HUVEC	blood vessel:	n/a
28	chr9:12704964-12705014	Caco-2	colon:	n/a
29	chr9:12693326-12693376	GM19239	blood:	n/a
30	chr9:12693694-12693744	GM12878	blood:	n/a
31	chr9:12693694-12693744	SK-N-SH_RA	brain:	n/a
32	chr9:12693694-12693744	SK-N-SH	brain:	n/a
33	chr9:12693326-12693376	BJ	skin:	n/a
34	chr9:12704964-12705014	BE2_C	brain:	n/a
35	chr9:12693326-12693376	SK-N-SH	brain:	n/a
36	chr9:12693326-12693376	HCM	heart:	n/a
37	chr9:12693326-12693376	HEK293	kidney:	embryo
38	chr9:12704964-12705014	NH-A	brain:	n/a
39	chr9:12693326-12693376	NB4	blood:	n/a
40	chr9:12704964-12705014	NB4	blood:	n/a
41	chr9:12704964-12705014	HEEpiC	esophagus:	n/a
42	chr9:12693694-12693744	HCM	heart:	n/a
43	chr9:12693326-12693376	HepG2	liver:	n/a
44	chr9:12693694-12693744	GM12891	blood:	n/a
45	chr9:12704964-12705014	AG09319	gingival:	n/a
46	chr9:12693694-12693744	HEK293	kidney:	embryo
47	chr9:12693694-12693744	AG04449	skin:	fetal
48	chr9:12704964-12705014	HL-60	blood:	n/a
49	chr9:12704964-12705014	ECC-1	luminal epithelium:	n/a
50	chr9:12693326-12693376	ECC-1	luminal epithelium:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:12694806..12696732-chr9:12696808..12698503,2	MCF-7	breast:
2	chr9:12495478..12497603-chr9:12499554..12502350,2	MCF-7	breast:
3	chr9:12425929..12426463-chr9:12464660..12465379,2	MCF-7	breast:
4	chr6:116381055..116381867-chr9:12405688..12406208,2	Hela-S3	cervix:
5	chr9:12494239..12495105-chr9:12503977..12504835,2	MCF-7	breast:
6	chr9:10855600..10856394-chr9:12425953..12426703,2	MCF-7	breast:
7	chr9:12494239..12495105-chr9:12503977..12504835,2	MCF-7	breast:
8	chr9:12631997..12633907-chr9:12634270..12637039,2	MCF-7	breast:
9	chr9:12495478..12497603-chr9:12499554..12502350,2	MCF-7	breast:
10	chr9:12268631..12271178-chr9:12273434..12276211,2	K562	blood:
11	chr9:12708111..12711033-chr9:13076014..13078647,2	MCF-7	breast:
12	chr9:12526692..12528486-chr9:12531576..12533111,2	MCF-7	breast:
13	chr16:89002000..89004763-chr9:12244429..12246932,2	MCF-7	breast:
14	chr9:12554435..12555308-chr9:12639713..12640600,2	MCF-7	breast:
15	chr9:12631997..12633907-chr9:12634270..12637039,2	MCF-7	breast:
16	chr9:12615022..12617476-chr9:12617492..12619010,2	MCF-7	breast:
17	chr1:149223798..149224416-chr9:12526808..12527328,4	MCF-7	breast:
18	chr9:12268631..12271178-chr9:12273434..12276211,2	K562	blood:
19	chr9:12615022..12617476-chr9:12617492..12619010,2	MCF-7	breast:
20	chr9:12425929..12426463-chr9:12464660..12465379,2	MCF-7	breast:
21	chr9:12554435..12555308-chr9:12639713..12640600,2	MCF-7	breast:
22	chr9:12607055..12609983-chr9:12671838..12674027,2	K562	blood:
23	chr9:12607055..12609983-chr9:12671838..12674027,2	K562	blood:
24	chr9:10365979..10366914-chr9:12329143..12329893,2	MCF-7	breast:
25	chr9:12526692..12528486-chr9:12531576..12533111,2	MCF-7	breast:
26	chr9:10855828..10856443-chr9:12329128..12329639,2	MCF-7	breast:
27	chr1:186649939..186650766-chr9:12429991..12430491,2	Hela-S3	cervix:
28	chr8:43095234..43095797-chr9:12480274..12480774,2	MCF-7	breast:
29	chr9:12709414..12711296-chr9:14429666..14432393,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C9orf150-4	chr9:12693912-12694487	NONHSAT130224
2	lnc-MPDZ-1	chr9:12700100-12700626	ENSG00000235448.1
3	lnc-TYRP1-4	chr9:12287320-12288238	NONHSAT130222
4	lnc-C9orf150-4	chr9:12693309-12693478	NONHSAT130224

Variant related genes	Relation type
ENSG00000231491	TF binding region
TYRP1	TF binding region
RNU2-47P	TF binding region
ENSG00000231491	CpG island
TYRP1	CpG island
RNU2-47P	CpG island
ENSG00000206737	chromatin interactions
ENSG00000107165	chromatin interactions
ENSG00000261226	chromatin interactions

Extended variants
information (count: 10245 )
Associated
traits (count: 111 )

Variant overlapped rSNPs/rCNVs (count:10245 , 50 per page) page: 1 2 3 4 5 6 7 ... 205

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs188486806	chr9:12196143-12196144	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs147408068	chr9:12196144-12196145	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs528201559	chr9:12196152-12196153	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs10756339	chr9:12196167-12196168	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs535996356	chr9:12196201-12196202	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs201595412	chr9:12196225-12196226	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs71489572	chr9:12196226-12196227	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs556006112	chr9:12196281-12196282	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs112359657	chr9:12196306-12196307	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs539717065	chr9:12196323-12196324	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs181666390	chr9:12196348-12196349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs556795415	chr9:12196353-12196354	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs570288814	chr9:12196369-12196370	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs376058925	chr9:12196377-12196378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs370472913	chr9:12196432-12196433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs535447571	chr9:12196433-12196434	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs558515876	chr9:12196437-12196438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs184476412	chr9:12196442-12196443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs543067808	chr9:12196452-12196453	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs369207406	chr9:12196453-12196454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs368091356	chr9:12196476-12196477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs528983702	chr9:12196479-12196480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs77650354	chr9:12196485-12196486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs542375443	chr9:12196498-12196499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs148443771	chr9:12196572-12196573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs10124564	chr9:12196591-12196592	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs142362627	chr9:12196593-12196594	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs373861352	chr9:12196601-12196602	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs565047239	chr9:12196604-12196605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs189581314	chr9:12196621-12196622	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs181915852	chr9:12196633-12196634	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs570091532	chr9:12196637-12196638	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs541136563	chr9:12196645-12196646	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs151265301	chr9:12196744-12196745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs549543849	chr9:12196793-12196794	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs566254344	chr9:12196797-12196798	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs573137093	chr9:12196813-12196814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs558456249	chr9:12196835-12196836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs73408464	chr9:12196838-12196839	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs537006145	chr9:12196887-12196888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs146647290	chr9:12196894-12196895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs186248539	chr9:12196896-12196897	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs371152267	chr9:12196903-12196904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs559052418	chr9:12196906-12196907	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs190828359	chr9:12196907-12196908	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs544823231	chr9:12196925-12196926	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs557492515	chr9:12196931-12196932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs80272761	chr9:12196982-12196983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs577787513	chr9:12197071-12197072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs530721181	chr9:12197076-12197077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:111)

Disease	PMID	Source
Disorders of sex development	21048976	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Cancer	20164920	CNVD
Developmental delay	21147756	CNVD
small cell lung cancer	21764851	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Gastric cancer	16891809	CNVD
Mental retardation	17847001	CNVD
Cutaneous squamous cell carcinomas	17420988	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21611746	CNVD
Melanoma	22183965	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Chordoma	21215367	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	21811587	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:637 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:12192000-12200800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr9:12200400-12200600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr9:12200400-12200800	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr9:12200400-12202000	Enhancers	Placenta Amnion	Placenta Amnion
5	chr9:12200600-12201000	Enhancers	H1 Cell Line	embryonic stem cell
6	chr9:12200800-12201200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr9:12201200-12204400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr9:12204400-12204800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr9:12212600-12213000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr9:12212600-12213600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr9:12212800-12214000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr9:12213000-12213400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr9:12213000-12213800	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr9:12213400-12214200	Enhancers	Brain Germinal Matrix	brain
15	chr9:12213400-12214400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr9:12213800-12214200	Enhancers	Brain Hippocampus Middle	brain
17	chr9:12221800-12222000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr9:12222000-12224400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr9:12224200-12224600	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr9:12224200-12225000	Enhancers	HUES64 Cell Line	embryonic stem cell
21	chr9:12224200-12225000	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr9:12224400-12224800	Enhancers	H9 Cell Line	embryonic stem cell
23	chr9:12224400-12224800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr9:12231000-12231400	Enhancers	Liver	Liver
25	chr9:12231200-12231600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr9:12231400-12233400	Weak transcription	Liver	Liver
27	chr9:12231600-12232000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr9:12233400-12233800	Enhancers	Liver	Liver
29	chr9:12235200-12235600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr9:12241200-12242000	Enhancers	iPS-15b Cell Line	embryonic stem cell
31	chr9:12241400-12243200	Enhancers	HUES64 Cell Line	embryonic stem cell
32	chr9:12241600-12242000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr9:12241600-12242000	Enhancers	HUES48 Cell Line	embryonic stem cell
34	chr9:12241600-12242000	Enhancers	HUES6 Cell Line	embryonic stem cell
35	chr9:12241600-12242000	Enhancers	iPS-18 Cell Line	embryonic stem cell
36	chr9:12241600-12242000	Enhancers	iPS-20b Cell Line	embryonic stem cell
37	chr9:12242600-12242800	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
38	chr9:12260800-12261200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr9:12271200-12271600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr9:12271200-12274800	Enhancers	Rectal Smooth Muscle	rectum
41	chr9:12271200-12275200	Enhancers	Fetal Brain Male	brain
42	chr9:12271400-12271600	Enhancers	HUES48 Cell Line	embryonic stem cell
43	chr9:12271400-12272000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr9:12271400-12273400	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr9:12271600-12272000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
46	chr9:12271600-12272000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
47	chr9:12271600-12272600	Enhancers	Duodenum Smooth Muscle	Duodenum
48	chr9:12271600-12272800	Enhancers	HUES6 Cell Line	embryonic stem cell
49	chr9:12271600-12274400	Enhancers	Colon Smooth Muscle	Colon
50	chr9:12271600-12276600	Weak transcription	HUES48 Cell Line	embryonic stem cell

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